RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 PKD1L3Q7Z443 1732 aa16.26■□□□□ 0.19
SHC1-202ENST00000368445 MINDY4BA8MYZ0 360 aa16.26■□□□□ 0.19
SHC1-202ENST00000368445 MCM5P33992 734 aa16.26■□□□□ 0.19
SHC1-202ENST00000368445 SETDB2Q96T68 719 aa16.26■□□□□ 0.19
SHC1-202ENST00000368445 ARMT1Q9H993 441 aa16.26■□□□□ 0.19
SHC1-202ENST00000368445 MBD4O95243 580 aa16.25■□□□□ 0.19
SHC1-202ENST00000368445 PDE6AP16499 860 aa16.25■□□□□ 0.19
SHC1-202ENST00000368445 GYG1P46976 350 aa16.25■□□□□ 0.19
SHC1-202ENST00000368445 CHAF1AQ13111 956 aaPredicted RBP16.25■□□□□ 0.19
SHC1-202ENST00000368445 INCENPQ9NQS7 918 aa16.25■□□□□ 0.19
SHC1-202ENST00000368445 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.25■□□□□ 0.19
SHC1-202ENST00000368445 CAMTA2O94983 1202 aa16.25■□□□□ 0.19
SHC1-202ENST00000368445 IL17RAQ96F46 866 aa16.25■□□□□ 0.19
SHC1-202ENST00000368445 CHRNDQ07001 517 aa16.25■□□□□ 0.19
SHC1-202ENST00000368445 SF3A1Q15459 793 aaKnown RBP16.25■□□□□ 0.19
SHC1-202ENST00000368445 CKAP2LQ8IYA6 745 aa16.25■□□□□ 0.19
SHC1-202ENST00000368445 FBXW7Q969H0 707 aa16.25■□□□□ 0.19
SHC1-202ENST00000368445 CCNL1Q9UK58 526 aaPredicted RBP16.25■□□□□ 0.19
SHC1-202ENST00000368445 MROH5Q6ZUA9 1318 aa16.24■□□□□ 0.19
SHC1-202ENST00000368445 MSNP26038 577 aaKnown RBP16.24■□□□□ 0.19
SHC1-202ENST00000368445 RASGRF1Q13972 1273 aa16.24■□□□□ 0.19
SHC1-202ENST00000368445 CCDC183Q5T5S1 534 aa16.24■□□□□ 0.19
SHC1-202ENST00000368445 MICU3Q86XE3 530 aa16.24■□□□□ 0.19
SHC1-202ENST00000368445 ADAMTS7Q9UKP4 1686 aa16.24■□□□□ 0.19
SHC1-202ENST00000368445 ARFGEF2Q9Y6D5 1785 aa16.24■□□□□ 0.19
SHC1-202ENST00000368445 B4E1Z4 1266 aa16.24■□□□□ 0.19
SHC1-202ENST00000368445 TSGA10IPQ3SY00 556 aa16.24■□□□□ 0.19
SHC1-202ENST00000368445 RRAGDQ9NQL2 400 aaPredicted RBP16.24■□□□□ 0.19
SHC1-202ENST00000368445 WTIPA6NIX2 430 aaPredicted RBP16.24■□□□□ 0.19
SHC1-202ENST00000368445 POLR3DP05423 398 aaPredicted RBP16.24■□□□□ 0.19
SHC1-202ENST00000368445 CCDC173Q0VFZ6 552 aa16.24■□□□□ 0.19
SHC1-202ENST00000368445 FAM43AQ8N2R8 423 aa16.24■□□□□ 0.19
SHC1-202ENST00000368445 CHMP4CQ96CF2 233 aa16.24■□□□□ 0.19
SHC1-202ENST00000368445 SLC4A8Q2Y0W8 1093 aa16.23■□□□□ 0.19
SHC1-202ENST00000368445 TTC6Q86TZ1 520 aa16.23■□□□□ 0.19
SHC1-202ENST00000368445 LINC00116Q8NCU8 138 aa16.23■□□□□ 0.19
SHC1-202ENST00000368445 DENND2AQ9ULE3 1009 aa16.23■□□□□ 0.19
SHC1-202ENST00000368445 ADD2P35612 726 aa16.22■□□□□ 0.19
SHC1-202ENST00000368445 ZKSCAN3Q9BRR0 538 aa16.22■□□□□ 0.19
SHC1-202ENST00000368445 GNL3LQ9NVN8 582 aaKnown RBP16.22■□□□□ 0.19
SHC1-202ENST00000368445 CYP7A1P22680 504 aa16.22■□□□□ 0.19
SHC1-202ENST00000368445 CTDSPL2Q05D32 466 aa16.22■□□□□ 0.19
SHC1-202ENST00000368445 NLRP3Q96P20 1036 aa16.22■□□□□ 0.19
SHC1-202ENST00000368445 SCAND2PQ9GZW5 306 aaPredicted RBP16.22■□□□□ 0.19
SHC1-202ENST00000368445 SLC4A4Q9Y6R1 1079 aa16.22■□□□□ 0.19
SHC1-202ENST00000368445 ESPNB1AK53 854 aa16.22■□□□□ 0.19
SHC1-202ENST00000368445 PDIA3P30101 505 aaKnown RBP16.22■□□□□ 0.19
SHC1-202ENST00000368445 CAVIN4Q5BKX8 364 aa16.22■□□□□ 0.19
SHC1-202ENST00000368445 NAP1L5Q96NT1 182 aaPredicted RBP16.22■□□□□ 0.19
SHC1-202ENST00000368445 MYL10Q9BUA6 226 aa16.22■□□□□ 0.19
SHC1-202ENST00000368445 ORC3Q9UBD5 711 aaPredicted RBP16.22■□□□□ 0.19
SHC1-202ENST00000368445 RTCBQ9Y3I0 505 aaKnown RBP16.22■□□□□ 0.19
SHC1-202ENST00000368445 PRKAB2O43741 272 aa16.21■□□□□ 0.19
SHC1-202ENST00000368445 RFC4P35249 363 aa16.21■□□□□ 0.19
SHC1-202ENST00000368445 TFCP2L1Q9NZI6 479 aa16.21■□□□□ 0.19
SHC1-202ENST00000368445 ROBO1Q9Y6N7 1651 aa16.21■□□□□ 0.19
SHC1-202ENST00000368445 ME1P48163 572 aa16.21■□□□□ 0.19
SHC1-202ENST00000368445 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.21■□□□□ 0.19
SHC1-202ENST00000368445 NACAP1Q9BZK3 213 aa16.21■□□□□ 0.19
SHC1-202ENST00000368445 N4BP2Q86UW6 1770 aaPredicted RBP16.21■□□□□ 0.19
SHC1-202ENST00000368445 DHX16O60231 1041 aaKnown RBP16.21■□□□□ 0.18
SHC1-202ENST00000368445 HMGN5P82970 282 aaKnown RBP16.21■□□□□ 0.18
SHC1-202ENST00000368445 FTOQ9C0B1 505 aaKnown RBP eCLIP16.21■□□□□ 0.18
SHC1-202ENST00000368445 DACT1Q9NYF0 836 aa16.21■□□□□ 0.18
SHC1-202ENST00000368445 IFIT3O14879 490 aaKnown RBP16.2■□□□□ 0.18
SHC1-202ENST00000368445 PFKFB2O60825 505 aa16.2■□□□□ 0.18
SHC1-202ENST00000368445 TBC1D9BQ66K14 1250 aa16.2■□□□□ 0.18
SHC1-202ENST00000368445 SYNE3Q6ZMZ3 975 aa16.2■□□□□ 0.18
SHC1-202ENST00000368445 NUP133Q8WUM0 1156 aa16.2■□□□□ 0.18
SHC1-202ENST00000368445 CPLX2Q6PUV4 134 aaKnown RBP16.2■□□□□ 0.18
SHC1-202ENST00000368445 C8orf76Q96K31 380 aa16.2■□□□□ 0.18
SHC1-202ENST00000368445 TNMDQ9H2S6 317 aa16.2■□□□□ 0.18
SHC1-202ENST00000368445 GJB4Q9NTQ9 266 aa16.2■□□□□ 0.18
SHC1-202ENST00000368445 USP25Q9UHP3 1055 aa16.2■□□□□ 0.18
SHC1-202ENST00000368445 NSUN7Q8NE18 718 aaKnown RBP16.2■□□□□ 0.18
SHC1-202ENST00000368445 NUP62CLQ9H1M0 184 aa16.2■□□□□ 0.18
SHC1-202ENST00000368445 NTSR2O95665 410 aa16.19■□□□□ 0.18
SHC1-202ENST00000368445 LIG1P18858 919 aa16.19■□□□□ 0.18
SHC1-202ENST00000368445 TMEM67Q5HYA8 995 aa16.19■□□□□ 0.18
SHC1-202ENST00000368445 C3orf67Q6ZVT6 689 aa16.19■□□□□ 0.18
SHC1-202ENST00000368445 CFAP45Q9UL16 551 aa16.19■□□□□ 0.18
SHC1-202ENST00000368445 DISP2A7MBM2 1401 aa16.19■□□□□ 0.18
SHC1-202ENST00000368445 CELF1Q92879 486 aaKnown RBP16.19■□□□□ 0.18
SHC1-202ENST00000368445 ANKIB1Q9P2G1 1089 aa16.19■□□□□ 0.18
SHC1-202ENST00000368445 TPTE2Q6XPS3 522 aa16.18■□□□□ 0.18
SHC1-202ENST00000368445 BARGINQ6ZT62 677 aa16.18■□□□□ 0.18
SHC1-202ENST00000368445 TCHHQ07283 1943 aa16.18■□□□□ 0.18
SHC1-202ENST00000368445 CRYBG1Q9Y4K1 1723 aa16.18■□□□□ 0.18
SHC1-202ENST00000368445 RFX7Q2KHR2 1363 aa16.18■□□□□ 0.18
SHC1-202ENST00000368445 ERICH2A1L162 156 aa16.18■□□□□ 0.18
SHC1-202ENST00000368445 ADD1P35611 737 aaKnown RBP16.18■□□□□ 0.18
SHC1-202ENST00000368445 SDR42E1Q8WUS8 393 aa16.18■□□□□ 0.18
SHC1-202ENST00000368445 AK7Q96M32 723 aa16.18■□□□□ 0.18
SHC1-202ENST00000368445 ATP2B1P20020 1258 aa16.18■□□□□ 0.18
SHC1-202ENST00000368445 EXOSC10Q01780 885 aaKnown RBP16.18■□□□□ 0.18
SHC1-202ENST00000368445 UBE3CQ15386 1083 aa16.18■□□□□ 0.18
SHC1-202ENST00000368445 MFSD6Q6ZSS7 791 aa16.18■□□□□ 0.18
SHC1-202ENST00000368445 VGLL2Q8N8G2 317 aa16.18■□□□□ 0.18
SHC1-202ENST00000368445 LEO1Q8WVC0 666 aaPredicted RBP16.18■□□□□ 0.18
SHC1-202ENST00000368445 CCDC69A6NI79 296 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms