RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 LLPHQ9BRT6 129 aaKnown RBP21.37■■□□□ 1.01
LMNA-207ENST00000368301 NBPF3Q9H094 633 aa21.37■■□□□ 1.01
LMNA-207ENST00000368301 ELP1O95163 1332 aa21.37■■□□□ 1.01
LMNA-207ENST00000368301 ARID4AP29374 1257 aaPredicted RBP21.36■■□□□ 1.01
LMNA-207ENST00000368301 LPIN2Q92539 896 aa21.36■■□□□ 1.01
LMNA-207ENST00000368301 SPATA32Q96LK8 384 aa21.36■■□□□ 1.01
LMNA-207ENST00000368301 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.36■■□□□ 1.017e-7■■■□□ 15.7
LMNA-207ENST00000368301 NIP7Q9Y221 180 aaKnown RBP eCLIP21.36■■□□□ 1.01
LMNA-207ENST00000368301 ZNF532Q9HCE3 1301 aa21.36■■□□□ 1.01
LMNA-207ENST00000368301 ANTXR2P58335 489 aa21.36■■□□□ 1.01
LMNA-207ENST00000368301 RAB11FIP4Q86YS3 637 aa21.36■■□□□ 1.01
LMNA-207ENST00000368301 MB21D2Q8IYB1 491 aaPredicted RBP21.36■■□□□ 1.01
LMNA-207ENST00000368301 FUCA2Q9BTY2 467 aa21.36■■□□□ 1.01
LMNA-207ENST00000368301 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.35■■□□□ 1.01
LMNA-207ENST00000368301 COL4A1P02462 1669 aa21.35■■□□□ 1.01
LMNA-207ENST00000368301 MROH5Q6ZUA9 1318 aa21.35■■□□□ 1.01
LMNA-207ENST00000368301 SALL1Q9NSC2 1324 aa21.35■■□□□ 1.01
LMNA-207ENST00000368301 DDX60Q8IY21 1712 aaKnown RBP21.35■■□□□ 1.01
LMNA-207ENST00000368301 PRC1O43663 620 aa21.35■■□□□ 1.01
LMNA-207ENST00000368301 NTSR2O95665 410 aa21.35■■□□□ 1.01
LMNA-207ENST00000368301 SMIM5Q71RC9 77 aa21.35■■□□□ 1.01
LMNA-207ENST00000368301 PDE6AP16499 860 aa21.34■■□□□ 1.01
LMNA-207ENST00000368301 GUCY1B3Q02153 619 aa21.34■■□□□ 1.01
LMNA-207ENST00000368301 ZNF274Q96GC6 653 aaPredicted RBP21.34■■□□□ 1.01
LMNA-207ENST00000368301 PGBD1Q96JS3 809 aa21.34■■□□□ 1.01
LMNA-207ENST00000368301 RREB1Q92766 1687 aa21.34■■□□□ 1.01
LMNA-207ENST00000368301 LETM1O95202 739 aaPredicted RBP21.34■■□□□ 1.01
LMNA-207ENST00000368301 ZSCAN30Q86W11 494 aa21.34■■□□□ 1.01
LMNA-207ENST00000368301 MPHOSPH8Q99549 860 aa21.34■■□□□ 1.01
LMNA-207ENST00000368301 FTOQ9C0B1 505 aaKnown RBP eCLIP21.34■■□□□ 1.01
LMNA-207ENST00000368301 SCAND2PQ9GZW5 306 aaPredicted RBP21.34■■□□□ 1.01
LMNA-207ENST00000368301 TCRBV5S4A2TA0A5A2 114 aa21.33■■□□□ 1.01
LMNA-207ENST00000368301 ZNF213O14771 459 aa21.33■■□□□ 1.01
LMNA-207ENST00000368301 RASGRF1Q13972 1273 aa21.33■■□□□ 1.01
LMNA-207ENST00000368301 CAMK4Q16566 473 aa21.33■■□□□ 1.01
LMNA-207ENST00000368301 AK7Q96M32 723 aa21.33■■□□□ 1.01
LMNA-207ENST00000368301 CEBPZQ03701 1054 aaKnown RBP21.33■■□□□ 1
LMNA-207ENST00000368301 TTF1Q15361 905 aaPredicted RBP21.33■■□□□ 1
LMNA-207ENST00000368301 FAM98CQ17RN3 349 aaKnown RBP21.33■■□□□ 1
LMNA-207ENST00000368301 BARGINQ6ZT62 677 aa21.33■■□□□ 1
LMNA-207ENST00000368301 TBC1D10CQ8IV04 446 aa21.33■■□□□ 1
LMNA-207ENST00000368301 ATRNO75882 1429 aa21.32■■□□□ 1
LMNA-207ENST00000368301 FDPSP14324 419 aaKnown RBP21.32■■□□□ 1
LMNA-207ENST00000368301 ZSCAN25Q6NSZ9 544 aa21.32■■□□□ 1
LMNA-207ENST00000368301 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.32■■□□□ 1
LMNA-207ENST00000368301 UQCRFS1P1P0C7P4 283 aa21.32■■□□□ 1
LMNA-207ENST00000368301 ADD1P35611 737 aaKnown RBP21.32■■□□□ 1
LMNA-207ENST00000368301 UBE3CQ15386 1083 aa21.32■■□□□ 1
LMNA-207ENST00000368301 PTF1AQ7RTS3 328 aa21.32■■□□□ 1
LMNA-207ENST00000368301 SPATA5Q8NB90 893 aa21.32■■□□□ 1
LMNA-207ENST00000368301 ARAP2Q8WZ64 1704 aa21.32■■□□□ 1
LMNA-207ENST00000368301 SLC5A1P13866 664 aa21.31■■□□□ 1
LMNA-207ENST00000368301 MCM5P33992 734 aa21.31■■□□□ 1
LMNA-207ENST00000368301 EVCP57679 992 aa21.31■■□□□ 1
LMNA-207ENST00000368301 HMGN5P82970 282 aaKnown RBP21.31■■□□□ 1
LMNA-207ENST00000368301 PARP10Q53GL7 1025 aa21.31■■□□□ 1
LMNA-207ENST00000368301 FBXL16Q8N461 479 aa21.31■■□□□ 1
LMNA-207ENST00000368301 HPS5Q9UPZ3 1129 aa21.31■■□□□ 1
LMNA-207ENST00000368301 KLF18A0A0U1RQI7 1052 aa21.31■■□□□ 1
LMNA-207ENST00000368301 APPP05067 770 aa21.31■■□□□ 1
LMNA-207ENST00000368301 BCAMP50895 628 aa21.31■■□□□ 1
LMNA-207ENST00000368301 LINC00116Q8NCU8 138 aa21.31■■□□□ 1
LMNA-207ENST00000368301 NCOA7Q8NI08 942 aa21.31■■□□□ 1
LMNA-207ENST00000368301 DACT1Q9NYF0 836 aa21.31■■□□□ 1
LMNA-207ENST00000368301 USP25Q9UHP3 1055 aa21.31■■□□□ 1
LMNA-207ENST00000368301 NAA16Q6N069 864 aaPredicted RBP21.3■■□□□ 1
LMNA-207ENST00000368301 C3orf67Q6ZVT6 689 aa21.3■■□□□ 1
LMNA-207ENST00000368301 ZSCAN16Q9H4T2 348 aaPredicted RBP21.3■■□□□ 1
LMNA-207ENST00000368301 CARMIL3Q8ND23 1372 aa21.3■■□□□ 1
LMNA-207ENST00000368301 CCDC152Q4G0S7 254 aa21.3■■□□□ 1
LMNA-207ENST00000368301 RALYLQ86SE5 291 aaKnown RBP21.3■■□□□ 1
LMNA-207ENST00000368301 INCENPQ9NQS7 918 aa21.3■■□□□ 1
LMNA-207ENST00000368301 WTIPA6NIX2 430 aaPredicted RBP21.29■■□□□ 1
LMNA-207ENST00000368301 GOLGA8BA8MQT2 603 aa21.29■■□□□ 1
LMNA-207ENST00000368301 OTUD7BQ6GQQ9 843 aa21.29■■□□□ 1
LMNA-207ENST00000368301 CYB5R4Q7L1T6 521 aa21.29■■□□□ 1
LMNA-207ENST00000368301 ILDR1Q86SU0 546 aaPredicted RBP21.29■■□□□ 1
LMNA-207ENST00000368301 MAGEB6Q8N7X4 407 aa21.29■■□□□ 1
LMNA-207ENST00000368301 GOLGA6L4A6NEF3 574 aa21.29■■□□□ 1
LMNA-207ENST00000368301 STRBPQ96SI9 672 aaKnown RBP21.29■■□□□ 1
LMNA-207ENST00000368301 NUP62CLQ9H1M0 184 aa21.29■■□□□ 1
LMNA-207ENST00000368301 NR1I2O75469 434 aa21.28■■□□□ 1
LMNA-207ENST00000368301 CKAP2LQ8IYA6 745 aa21.28■■□□□ 1
LMNA-207ENST00000368301 MPNDQ8N594 471 aa21.28■■□□□ 1
LMNA-207ENST00000368301 HS1BP3Q53T59 392 aa21.28■■□□□ 1
LMNA-207ENST00000368301 IGHMBP2P38935 993 aaKnown RBP21.27■■□□□ 1
LMNA-207ENST00000368301 CHRNDQ07001 517 aa21.27■■□□□ 1
LMNA-207ENST00000368301 BICD2Q8TD16 824 aa21.27■■□□□ 1
LMNA-207ENST00000368301 AIDAQ96BJ3 306 aa21.27■■□□□ 1
LMNA-207ENST00000368301 SENP2Q9HC62 589 aa21.27■■□□□ 1
LMNA-207ENST00000368301 EPB41L4AQ9HCS5 686 aaPredicted RBP21.27■■□□□ 1
LMNA-207ENST00000368301 GJB4Q9NTQ9 266 aa21.27■■□□□ 1
LMNA-207ENST00000368301 COL5A3P25940 1745 aaPredicted RBP21.27■■□□□ 1
LMNA-207ENST00000368301 MYH15Q9Y2K3 1946 aa21.27■■□□□ 1
LMNA-207ENST00000368301 ERFEQ4G0M1 354 aa21.27■□□□□ 0.99
LMNA-207ENST00000368301 USP28Q96RU2 1077 aa21.27■□□□□ 0.99
LMNA-207ENST00000368301 ARMT1Q9H993 441 aa21.27■□□□□ 0.99
LMNA-207ENST00000368301 NOL7Q9UMY1 257 aaKnown RBP21.27■□□□□ 0.99
LMNA-207ENST00000368301 IQSEC3Q9UPP2 1182 aaPredicted RBP21.27■□□□□ 0.99
LMNA-207ENST00000368301 CICQ96RK0 1608 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms