RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 CCDC87Q9NVE4 849 aa8.61□□□□□ -1.03
ECHDC1-202ENST00000368289 MAFBQ9Y5Q3 323 aaPredicted RBP8.61□□□□□ -1.03
ECHDC1-202ENST00000368289 FAM187AA6NFU0 413 aa8.6□□□□□ -1.03
ECHDC1-202ENST00000368289 DGAT1O75907 488 aa8.6□□□□□ -1.03
ECHDC1-202ENST00000368289 NR3C2P08235 984 aa8.6□□□□□ -1.03
ECHDC1-202ENST00000368289 TMF1P82094 1093 aa8.6□□□□□ -1.03
ECHDC1-202ENST00000368289 CC2D2BQ6DHV5 1058 aa8.6□□□□□ -1.03
ECHDC1-202ENST00000368289 LDHDQ86WU2 507 aa8.6□□□□□ -1.03
ECHDC1-202ENST00000368289 GPR101Q96P66 508 aaPredicted RBP8.6□□□□□ -1.03
ECHDC1-202ENST00000368289 ARID3AQ99856 593 aa8.6□□□□□ -1.03
ECHDC1-202ENST00000368289 TAF1DQ9H5J8 278 aaPredicted RBP8.6□□□□□ -1.03
ECHDC1-202ENST00000368289 NOD1Q9Y239 953 aa8.6□□□□□ -1.03
ECHDC1-202ENST00000368289 TIAM2Q8IVF5 1701 aa8.6□□□□□ -1.03
ECHDC1-202ENST00000368289 EYSQ5T1H1 3165 aa8.59□□□□□ -1.03
ECHDC1-202ENST00000368289 USP17L3A6NCW0 530 aa8.59□□□□□ -1.03
ECHDC1-202ENST00000368289 USP17L4A6NCW7 530 aa8.59□□□□□ -1.03
ECHDC1-202ENST00000368289 WDR4P57081 412 aaKnown RBP8.59□□□□□ -1.03
ECHDC1-202ENST00000368289 PKDCCQ504Y2 493 aa8.59□□□□□ -1.03
ECHDC1-202ENST00000368289 OXLD1Q5BKU9 147 aa8.59□□□□□ -1.03
ECHDC1-202ENST00000368289 USP17L2Q6R6M4 530 aa8.59□□□□□ -1.03
ECHDC1-202ENST00000368289 USP17L1Q7RTZ2 530 aa8.59□□□□□ -1.03
ECHDC1-202ENST00000368289 TRIM50Q86XT4 487 aa8.59□□□□□ -1.03
ECHDC1-202ENST00000368289 ZCRB1Q8TBF4 217 aaKnown RBP8.59□□□□□ -1.03
ECHDC1-202ENST00000368289 GCC1Q96CN9 775 aa8.59□□□□□ -1.03
ECHDC1-202ENST00000368289 IRX2Q9BZI1 471 aaPredicted RBP8.59□□□□□ -1.03
ECHDC1-202ENST00000368289 VRTNQ9H8Y1 702 aa8.59□□□□□ -1.03
ECHDC1-202ENST00000368289 INSRP06213 1382 aa8.59□□□□□ -1.03
ECHDC1-202ENST00000368289 ADAMTSL1Q8N6G6 1762 aa8.58□□□□□ -1.04
ECHDC1-202ENST00000368289 ATP5J2-PTCD1G3V325 749 aa8.58□□□□□ -1.04
ECHDC1-202ENST00000368289 RFX1P22670 979 aa8.58□□□□□ -1.04
ECHDC1-202ENST00000368289 HNRNPUQ00839 825 aaKnown RBP eCLIP8.58□□□□□ -1.04
ECHDC1-202ENST00000368289 NCOA4Q13772 614 aa8.58□□□□□ -1.04
ECHDC1-202ENST00000368289 NLGN1Q8N2Q7 840 aa8.58□□□□□ -1.04
ECHDC1-202ENST00000368289 PIGBQ92521 554 aa8.58□□□□□ -1.04
ECHDC1-202ENST00000368289 SLC4A9Q96Q91 983 aa8.58□□□□□ -1.04
ECHDC1-202ENST00000368289 ZIC5Q96T25 663 aa8.58□□□□□ -1.04
ECHDC1-202ENST00000368289 TMPRSS4Q9NRS4 437 aa8.58□□□□□ -1.04
ECHDC1-202ENST00000368289 FAM208AQ9UK61 1670 aaKnown RBP8.58□□□□□ -1.04
ECHDC1-202ENST00000368289 PRUNE2Q8WUY3 3088 aa8.57□□□□□ -1.04
ECHDC1-202ENST00000368289 KIF7Q2M1P5 1343 aa8.57□□□□□ -1.04
ECHDC1-202ENST00000368289 TTC28Q96AY4 2481 aa8.57□□□□□ -1.04
ECHDC1-202ENST00000368289 LOC102724428A0A0B4J2F2 783 aa8.57□□□□□ -1.04
ECHDC1-202ENST00000368289 ZIC2O95409 532 aaPredicted RBP8.57□□□□□ -1.04
ECHDC1-202ENST00000368289 ATP1A2P50993 1020 aa8.57□□□□□ -1.04
ECHDC1-202ENST00000368289 SIK1P57059 783 aa8.57□□□□□ -1.04
ECHDC1-202ENST00000368289 ERVK-9P63128 1117 aa8.57□□□□□ -1.04
ECHDC1-202ENST00000368289 TSGA10IPQ3SY00 556 aa8.57□□□□□ -1.04
ECHDC1-202ENST00000368289 CST9Q5W186 159 aa8.57□□□□□ -1.04
ECHDC1-202ENST00000368289 MAP1SQ66K74 1059 aaPredicted RBP8.57□□□□□ -1.04
ECHDC1-202ENST00000368289 MPRIPQ6WCQ1 1025 aa8.57□□□□□ -1.04
ECHDC1-202ENST00000368289 SLC17A8Q8NDX2 589 aa8.57□□□□□ -1.04
ECHDC1-202ENST00000368289 HPS1Q92902 700 aa8.57□□□□□ -1.04
ECHDC1-202ENST00000368289 CCDC88AQ3V6T2 1871 aa8.57□□□□□ -1.04
ECHDC1-202ENST00000368289 AVPP01185 164 aa8.56□□□□□ -1.04
ECHDC1-202ENST00000368289 RALBP1Q15311 655 aa8.56□□□□□ -1.04
ECHDC1-202ENST00000368289 CTC1Q2NKJ3 1217 aa8.56□□□□□ -1.04
ECHDC1-202ENST00000368289 NBPF1Q3BBV0 1214 aa8.56□□□□□ -1.04
ECHDC1-202ENST00000368289 CNTROBQ8N137 903 aa8.56□□□□□ -1.04
ECHDC1-202ENST00000368289 DEPDC4Q8N2C3 294 aa8.56□□□□□ -1.04
ECHDC1-202ENST00000368289 CYLDQ9NQC7 956 aa8.56□□□□□ -1.04
ECHDC1-202ENST00000368289 PPP4R2Q9NY27 417 aa8.56□□□□□ -1.04
ECHDC1-202ENST00000368289 LAMA2P24043 3122 aaKnown RBP8.55□□□□□ -1.04
ECHDC1-202ENST00000368289 CAPN5O15484 640 aaPredicted RBP8.55□□□□□ -1.04
ECHDC1-202ENST00000368289 CYP27B1O15528 508 aa8.55□□□□□ -1.04
ECHDC1-202ENST00000368289 TIMP2P16035 220 aa8.55□□□□□ -1.04
ECHDC1-202ENST00000368289 CYP2U1Q7Z449 544 aa8.55□□□□□ -1.04
ECHDC1-202ENST00000368289 PBXIP1Q96AQ6 731 aa8.55□□□□□ -1.04
ECHDC1-202ENST00000368289 ITPKCQ96DU7 683 aa8.55□□□□□ -1.04
ECHDC1-202ENST00000368289 KLF16Q9BXK1 252 aaPredicted RBP8.55□□□□□ -1.04
ECHDC1-202ENST00000368289 MRS2Q9HD23 443 aa8.55□□□□□ -1.04
ECHDC1-202ENST00000368289 ABT1Q9ULW3 272 aaKnown RBP8.55□□□□□ -1.04
ECHDC1-202ENST00000368289 PARP3Q9Y6F1 533 aa8.55□□□□□ -1.04
ECHDC1-202ENST00000368289 SRPK2P78362 688 aaKnown RBP8.54□□□□□ -1.04
ECHDC1-202ENST00000368289 GRM1Q13255 1194 aa8.54□□□□□ -1.04
ECHDC1-202ENST00000368289 LTV1Q96GA3 475 aaPredicted RBP8.54□□□□□ -1.04
ECHDC1-202ENST00000368289 DDX21Q9NR30 783 aaKnown RBP eCLIP8.54□□□□□ -1.04
ECHDC1-202ENST00000368289 SRP68Q9UHB9 627 aaKnown RBP8.54□□□□□ -1.04
ECHDC1-202ENST00000368289 ASAP1Q9ULH1 1129 aa8.54□□□□□ -1.04
ECHDC1-202ENST00000368289 RBM19Q9Y4C8 960 aaKnown RBP8.54□□□□□ -1.04
ECHDC1-202ENST00000368289 SMG6Q86US8 1419 aaKnown RBP8.54□□□□□ -1.04
ECHDC1-202ENST00000368289 USP31Q70CQ4 1352 aa8.53□□□□□ -1.04
ECHDC1-202ENST00000368289 POLRMTO00411 1230 aaKnown RBP8.53□□□□□ -1.04
ECHDC1-202ENST00000368289 LILRA1O75019 489 aa8.53□□□□□ -1.04
ECHDC1-202ENST00000368289 UPP2O95045 317 aa8.53□□□□□ -1.04
ECHDC1-202ENST00000368289 MAP2K2P36507 400 aa8.53□□□□□ -1.04
ECHDC1-202ENST00000368289 SMCPP49901 116 aaPredicted RBP8.53□□□□□ -1.04
ECHDC1-202ENST00000368289 TRAPPC3LQ5T215 181 aa8.53□□□□□ -1.04
ECHDC1-202ENST00000368289 Q6ZVU0 165 aa8.53□□□□□ -1.04
ECHDC1-202ENST00000368289 RASA1P20936 1047 aa8.52□□□□□ -1.05
ECHDC1-202ENST00000368289 TM4SF1P30408 202 aa8.52□□□□□ -1.05
ECHDC1-202ENST00000368289 GTF2IP78347 998 aa8.52□□□□□ -1.05
ECHDC1-202ENST00000368289 CIAPIN1Q6FI81 312 aa8.52□□□□□ -1.05
ECHDC1-202ENST00000368289 NME9Q86XW9 330 aa8.52□□□□□ -1.05
ECHDC1-202ENST00000368289 NBPF15Q8N660 670 aa8.52□□□□□ -1.05
ECHDC1-202ENST00000368289 IP6K1Q92551 441 aa8.52□□□□□ -1.05
ECHDC1-202ENST00000368289 ZFAND3Q9H8U3 227 aa8.52□□□□□ -1.05
ECHDC1-202ENST00000368289 FANCIQ9NVI1 1328 aa8.52□□□□□ -1.05
ECHDC1-202ENST00000368289 FAM196BA6NMK8 535 aa8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 TRAF5O00463 557 aa8.51□□□□□ -1.05
ECHDC1-202ENST00000368289 AXIN1O15169 862 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms