RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 CCDC129Q6ZRS4 1044 aa9.38□□□□□ -0.91
SHPRH-203ENST00000367505 ATRIPQ8WXE1 791 aa9.38□□□□□ -0.91
SHPRH-203ENST00000367505 PHACTR3Q96KR7 559 aa9.38□□□□□ -0.91
SHPRH-203ENST00000367505 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.38□□□□□ -0.91
SHPRH-203ENST00000367505 TTF2Q9UNY4 1162 aaKnown RBP9.38□□□□□ -0.91
SHPRH-203ENST00000367505 ZNF569Q5MCW4 686 aa9.38□□□□□ -0.91
SHPRH-203ENST00000367505 KLHL34Q8N239 644 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 DHX58Q96C10 678 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 BRD1O95696 1058 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 KRT2P35908 639 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 APOBRQ0VD83 1088 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 RAB11FIP4Q86YS3 637 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 UTP14AQ9BVJ6 771 aaKnown RBP9.37□□□□□ -0.91
SHPRH-203ENST00000367505 VPS18Q9P253 973 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 SLC4A4Q9Y6R1 1079 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 RIOK3O14730 519 aaKnown RBP9.37□□□□□ -0.91
SHPRH-203ENST00000367505 ASIC1P78348 528 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 TNRQ92752 1358 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 ZNF608Q9ULD9 1512 aaPredicted RBP9.37□□□□□ -0.91
SHPRH-203ENST00000367505 NEBLO76041 1014 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 PPP2R3AQ06190 1150 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 TTC31Q49AM3 519 aaPredicted RBP9.37□□□□□ -0.91
SHPRH-203ENST00000367505 FAM76AQ8TAV0 307 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 MACROD2A1Z1Q3 448 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 NAA16Q6N069 864 aaPredicted RBP9.37□□□□□ -0.91
SHPRH-203ENST00000367505 SYCP3Q8IZU3 236 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 RASSF4Q9H2L5 321 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 HLA-DOAP06340 250 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 CYP7A1P22680 504 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 TNNC1P63316 161 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 CCDC121Q6ZUS5 278 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 TMEM87BQ96K49 555 aa9.37□□□□□ -0.91
SHPRH-203ENST00000367505 ARHGAP6O43182 974 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 MLKLQ8NB16 471 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 RNF216Q9NWF9 866 aaPredicted RBP9.36□□□□□ -0.91
SHPRH-203ENST00000367505 PA2G4Q9UQ80 394 aaKnown RBP9.36□□□□□ -0.91
SHPRH-203ENST00000367505 SNX14Q9Y5W7 946 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 ABCC10Q5T3U5 1492 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 CHL1O00533 1208 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 UBXN1Q04323 297 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 UBE4AQ14139 1066 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 TRAPPC8Q9Y2L5 1435 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 EXOC5O00471 708 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 PPFIA3O75145 1194 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 FBLN1P23142 703 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 ACTN2P35609 894 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 B4GALNT4Q76KP1 1039 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 LZTFL1Q9NQ48 299 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 DDX21Q9NR30 783 aaKnown RBP eCLIP9.36□□□□□ -0.91
SHPRH-203ENST00000367505 RBM28Q9NW13 759 aaKnown RBP9.36□□□□□ -0.91
SHPRH-203ENST00000367505 STX8Q9UNK0 236 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 GPATCH11Q8N954 259 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 NEK11Q8NG66 645 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 MMRN2Q9H8L6 949 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 TRPM2O94759 1503 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 KIF4AO95239 1232 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 CCDC174Q6PII3 467 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 IPO4Q8TEX9 1081 aaKnown RBP9.36□□□□□ -0.91
SHPRH-203ENST00000367505 C6orf50Q9HD87 102 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 GUCA1BQ9UMX6 200 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 IKBKGQ9Y6K9 419 aa9.36□□□□□ -0.91
SHPRH-203ENST00000367505 HSP90AA4PQ58FG1 418 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 TICAM2Q86XR7 235 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 LEO1Q8WVC0 666 aaPredicted RBP9.35□□□□□ -0.91
SHPRH-203ENST00000367505 FERMT1Q9BQL6 677 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 CBX8Q9HC52 389 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 TRIM35Q9UPQ4 493 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 GCC2Q8IWJ2 1684 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 SLC27A2O14975 620 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 ANO1Q5XXA6 986 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 RPGRQ92834 1020 aaKnown RBP9.35□□□□□ -0.91
SHPRH-203ENST00000367505 EDC4Q6P2E9 1401 aaKnown RBP9.35□□□□□ -0.91
SHPRH-203ENST00000367505 KIAA0232Q92628 1395 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 GNA11P29992 359 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 KARSQ15046 597 aaKnown RBP9.35□□□□□ -0.91
SHPRH-203ENST00000367505 MICALL1Q8N3F8 863 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 CUTAO60888 179 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 TSPY3P0CV98 308 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 TSPY8P0CW00 308 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 DTHD1Q6ZMT9 781 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 FBF1Q8TES7 1133 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 NAPGQ99747 312 aaPredicted RBP9.35□□□□□ -0.91
SHPRH-203ENST00000367505 A0A1B0GVL5 298 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 PPP2R5BQ15173 497 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 SPATA31E1Q6ZUB1 1445 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 MAST1Q9Y2H9 1570 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 KRT13P13646 458 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 CFAP58Q5T655 872 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 KRT79Q5XKE5 535 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 MSL1Q68DK7 614 aa9.35□□□□□ -0.91
SHPRH-203ENST00000367505 A0A1W2PRG0 241 aa9.34□□□□□ -0.91
SHPRH-203ENST00000367505 ATP2A1O14983 1001 aa9.34□□□□□ -0.91
SHPRH-203ENST00000367505 HOMER2Q9NSB8 354 aa9.34□□□□□ -0.91
SHPRH-203ENST00000367505 PUF60Q9UHX1 559 aaKnown RBP9.34□□□□□ -0.91
SHPRH-203ENST00000367505 UNC13AQ9UPW8 1703 aa9.34□□□□□ -0.91
SHPRH-203ENST00000367505 KDM5DQ9BY66 1539 aa9.34□□□□□ -0.91
SHPRH-203ENST00000367505 FANCCQ00597 558 aa9.34□□□□□ -0.91
SHPRH-203ENST00000367505 CCDC122Q5T0U0 273 aa9.34□□□□□ -0.91
SHPRH-203ENST00000367505 CADPS2Q86UW7 1296 aa9.34□□□□□ -0.91
SHPRH-203ENST00000367505 CHMP4BP1P59074 171 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms