RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 SLX4Q8IY92 1834 aa13.01□□□□□ -0.33
H3F3A-202ENST00000366814 ITGA6P23229 1130 aa13.01□□□□□ -0.33
H3F3A-202ENST00000366814 TIMM10P62072 90 aa13.01□□□□□ -0.33
H3F3A-202ENST00000366814 RASSF7Q02833 373 aa13.01□□□□□ -0.33
H3F3A-202ENST00000366814 NECTIN1Q15223 517 aa13.01□□□□□ -0.33
H3F3A-202ENST00000366814 TTC39AQ5SRH9 613 aa13.01□□□□□ -0.33
H3F3A-202ENST00000366814 CLEC17AQ6ZS10 378 aa13.01□□□□□ -0.33
H3F3A-202ENST00000366814 NOL8Q76FK4 1167 aaKnown RBP13.01□□□□□ -0.33
H3F3A-202ENST00000366814 TTLL11Q8NHH1 800 aa13.01□□□□□ -0.33
H3F3A-202ENST00000366814 UTP14AQ9BVJ6 771 aaKnown RBP13.01□□□□□ -0.33
H3F3A-202ENST00000366814 CNNM1Q9NRU3 951 aa13.01□□□□□ -0.33
H3F3A-202ENST00000366814 SH3TC1Q8TE82 1336 aa13□□□□□ -0.33
H3F3A-202ENST00000366814 KLRG2A4D1S0 409 aaPredicted RBP13□□□□□ -0.33
H3F3A-202ENST00000366814 TRAK2O60296 914 aa13□□□□□ -0.33
H3F3A-202ENST00000366814 PRR29P0C7W0 189 aa13□□□□□ -0.33
H3F3A-202ENST00000366814 METTL24Q5JXM2 366 aa13□□□□□ -0.33
H3F3A-202ENST00000366814 VPS53Q5VIR6 699 aa13□□□□□ -0.33
H3F3A-202ENST00000366814 CREB3L3Q68CJ9 461 aa13□□□□□ -0.33
H3F3A-202ENST00000366814 LDHAL6AQ6ZMR3 332 aa13□□□□□ -0.33
H3F3A-202ENST00000366814 RASEFQ8IZ41 740 aa13□□□□□ -0.33
H3F3A-202ENST00000366814 JAKMIP1Q96N16 626 aaKnown RBP13□□□□□ -0.33
H3F3A-202ENST00000366814 CCDC85AQ96PX6 553 aaPredicted RBP13□□□□□ -0.33
H3F3A-202ENST00000366814 PUS3Q9BZE2 481 aaKnown RBP13□□□□□ -0.33
H3F3A-202ENST00000366814 LIMCH1Q9UPQ0 1083 aa13□□□□□ -0.33
H3F3A-202ENST00000366814 ABCC12Q96J65 1359 aa13□□□□□ -0.33
H3F3A-202ENST00000366814 GOLIM4O00461 696 aa12.99□□□□□ -0.33
H3F3A-202ENST00000366814 NTSR2O95665 410 aa12.99□□□□□ -0.33
H3F3A-202ENST00000366814 ALDH1B1P30837 517 aa12.99□□□□□ -0.33
H3F3A-202ENST00000366814 KRT32Q14532 448 aa12.99□□□□□ -0.33
H3F3A-202ENST00000366814 MCMDC2Q4G0Z9 681 aa12.99□□□□□ -0.33
H3F3A-202ENST00000366814 DDX46Q7L014 1031 aaKnown RBP12.99□□□□□ -0.33
H3F3A-202ENST00000366814 ZGPATQ8N5A5 531 aaKnown RBP12.99□□□□□ -0.33
H3F3A-202ENST00000366814 HELLSQ9NRZ9 838 aa12.99□□□□□ -0.33
H3F3A-202ENST00000366814 RPGRQ92834 1020 aaKnown RBP12.99□□□□□ -0.33
H3F3A-202ENST00000366814 RNF25Q96BH1 459 aaPredicted RBP12.99□□□□□ -0.33
H3F3A-202ENST00000366814 EDC3Q96F86 508 aaKnown RBP12.99□□□□□ -0.33
H3F3A-202ENST00000366814 ZSCAN31Q96LW9 406 aaPredicted RBP12.99□□□□□ -0.33
H3F3A-202ENST00000366814 TTC14Q96N46 770 aa12.99□□□□□ -0.33
H3F3A-202ENST00000366814 GREM2Q9H772 168 aa12.99□□□□□ -0.33
H3F3A-202ENST00000366814 ZSWIM6Q9HCJ5 1215 aa12.99□□□□□ -0.33
H3F3A-202ENST00000366814 PDRG1Q9NUG6 133 aa12.99□□□□□ -0.33
H3F3A-202ENST00000366814 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.99□□□□□ -0.33
H3F3A-202ENST00000366814 PITPNM1O00562 1244 aa12.98□□□□□ -0.33
H3F3A-202ENST00000366814 SLC27A2O14975 620 aa12.98□□□□□ -0.33
H3F3A-202ENST00000366814 LMNB1P20700 586 aa12.98□□□□□ -0.33
H3F3A-202ENST00000366814 AK2P54819 239 aa12.98□□□□□ -0.33
H3F3A-202ENST00000366814 ANKRD1Q15327 319 aa12.98□□□□□ -0.33
H3F3A-202ENST00000366814 ATP2B3Q16720 1220 aa12.98□□□□□ -0.33
H3F3A-202ENST00000366814 SOGA3Q5TF21 947 aa12.98□□□□□ -0.33
H3F3A-202ENST00000366814 RUFY3Q7L099 469 aa12.98□□□□□ -0.33
H3F3A-202ENST00000366814 XAGE2Q96GT9 111 aa12.98□□□□□ -0.33
H3F3A-202ENST00000366814 NLRP3Q96P20 1036 aa12.98□□□□□ -0.33
H3F3A-202ENST00000366814 SH2B1Q9NRF2 756 aaPredicted RBP12.98□□□□□ -0.33
H3F3A-202ENST00000366814 TAF5LO75529 589 aa12.97□□□□□ -0.33
H3F3A-202ENST00000366814 BAG4O95429 457 aaKnown RBP12.97□□□□□ -0.33
H3F3A-202ENST00000366814 CYP2E1P05181 493 aaPredicted RBP12.97□□□□□ -0.33
H3F3A-202ENST00000366814 NFKBIEO00221 500 aa12.97□□□□□ -0.33
H3F3A-202ENST00000366814 ZFYP08048 801 aaPredicted RBP12.97□□□□□ -0.33
H3F3A-202ENST00000366814 CRY2Q49AN0 593 aa12.97□□□□□ -0.33
H3F3A-202ENST00000366814 BLOC1S2Q6QNY1 142 aa12.97□□□□□ -0.33
H3F3A-202ENST00000366814 ZNF589Q86UQ0 364 aaPredicted RBP12.97□□□□□ -0.33
H3F3A-202ENST00000366814 RBM17Q96I25 401 aaKnown RBP12.97□□□□□ -0.33
H3F3A-202ENST00000366814 RIPOR2Q9Y4F9 1068 aa12.97□□□□□ -0.33
H3F3A-202ENST00000366814 FER1L6Q2WGJ9 1857 aa12.97□□□□□ -0.33
H3F3A-202ENST00000366814 MROH5Q6ZUA9 1318 aa12.96□□□□□ -0.33
H3F3A-202ENST00000366814 TSGA10IPQ3SY00 556 aa12.96□□□□□ -0.33
H3F3A-202ENST00000366814 CCDC152Q4G0S7 254 aa12.96□□□□□ -0.33
H3F3A-202ENST00000366814 SLC10A5Q5PT55 438 aa12.96□□□□□ -0.33
H3F3A-202ENST00000366814 SYNE4Q8N205 404 aa12.96□□□□□ -0.33
H3F3A-202ENST00000366814 TAOK3Q9H2K8 898 aa12.96□□□□□ -0.33
H3F3A-202ENST00000366814 NDUFB9Q9Y6M9 179 aa12.96□□□□□ -0.33
H3F3A-202ENST00000366814 RIC1Q4ADV7 1423 aa12.96□□□□□ -0.33
H3F3A-202ENST00000366814 RPAP1Q9BWH6 1393 aaPredicted RBP12.96□□□□□ -0.34
H3F3A-202ENST00000366814 TNRC6CQ9HCJ0 1690 aaKnown RBP12.96□□□□□ -0.34
H3F3A-202ENST00000366814 RNF113AO15541 343 aaKnown RBP12.95□□□□□ -0.34
H3F3A-202ENST00000366814 HCLS1P14317 486 aaPredicted RBP12.95□□□□□ -0.34
H3F3A-202ENST00000366814 C1QTNF8P60827 252 aa12.95□□□□□ -0.34
H3F3A-202ENST00000366814 FKBP4Q02790 459 aaKnown RBP eCLIP12.95□□□□□ -0.34
H3F3A-202ENST00000366814 CCDC93Q567U6 631 aa12.95□□□□□ -0.34
H3F3A-202ENST00000366814 C7orf43Q8WVR3 580 aa12.95□□□□□ -0.34
H3F3A-202ENST00000366814 BBXQ8WY36 941 aaPredicted RBP12.95□□□□□ -0.34
H3F3A-202ENST00000366814 LAMB2P55268 1798 aa12.95□□□□□ -0.34
H3F3A-202ENST00000366814 PRELPP51888 382 aa12.95□□□□□ -0.34
H3F3A-202ENST00000366814 ADCK5Q3MIX3 580 aa12.95□□□□□ -0.34
H3F3A-202ENST00000366814 ZMYM1Q5SVZ6 1142 aa12.95□□□□□ -0.34
H3F3A-202ENST00000366814 L1TD1Q5T7N2 865 aaKnown RBP12.95□□□□□ -0.34
H3F3A-202ENST00000366814 ZSCAN25Q6NSZ9 544 aa12.95□□□□□ -0.34
H3F3A-202ENST00000366814 C3orf67Q6ZVT6 689 aa12.95□□□□□ -0.34
H3F3A-202ENST00000366814 MPHOSPH8Q99549 860 aa12.95□□□□□ -0.34
H3F3A-202ENST00000366814 WDR33Q9C0J8 1336 aaKnown RBP12.94□□□□□ -0.34
H3F3A-202ENST00000366814 PDE8BO95263 885 aa12.94□□□□□ -0.34
H3F3A-202ENST00000366814 HOXA10P31260 410 aaPredicted RBP12.94□□□□□ -0.34
H3F3A-202ENST00000366814 TTF1Q15361 905 aaPredicted RBP12.94□□□□□ -0.34
H3F3A-202ENST00000366814 OLFM4Q6UX06 510 aa12.94□□□□□ -0.34
H3F3A-202ENST00000366814 RTKN2Q8IZC4 609 aa12.94□□□□□ -0.34
H3F3A-202ENST00000366814 ZNF512BQ96KM6 892 aaPredicted RBP12.94□□□□□ -0.34
H3F3A-202ENST00000366814 CRAMP1Q96RY5 1269 aa12.94□□□□□ -0.34
H3F3A-202ENST00000366814 DSCC1Q9BVC3 393 aa12.94□□□□□ -0.34
H3F3A-202ENST00000366814 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.94□□□□□ -0.34
H3F3A-202ENST00000366814 ALDH8A1Q9H2A2 487 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms