RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 DCAF5Q96JK2 942 aa13.43□□□□□ -0.26
CDC42BPA-202ENST00000366764 EZRP15311 586 aaKnown RBP13.43□□□□□ -0.26
CDC42BPA-202ENST00000366764 GTF3C6Q969F1 213 aa13.43□□□□□ -0.26
CDC42BPA-202ENST00000366764 CLEC17AQ6ZS10 378 aa13.43□□□□□ -0.26
CDC42BPA-202ENST00000366764 STAT6P42226 847 aa13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 ENOX2Q16206 610 aaKnown RBP13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 IQUBQ8NA54 791 aa13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 TMEM87BQ96K49 555 aa13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 TCEANC2Q96MN5 208 aa13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 BAG1Q99933 345 aaPredicted RBP13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 HSF2BPO75031 334 aa13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 RIOK3O14730 519 aaKnown RBP13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 STXBP4Q6ZWJ1 553 aa13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 CADPS2Q86UW7 1296 aa13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 IQCDQ96DY2 449 aa13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 LDHCP07864 332 aa13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 USP5P45974 858 aa13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 CRNKL1Q9BZJ0 848 aaKnown RBP13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 BICC1Q9H694 974 aaKnown RBP13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 CBX8Q9HC52 389 aa13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 PRPHP41219 470 aa13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 SMC1AQ14683 1233 aaKnown RBP13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 SPECC1LQ69YQ0 1117 aa13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 TTF2Q9UNY4 1162 aaKnown RBP13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 PLVAPQ9BX97 442 aa13.42□□□□□ -0.26
CDC42BPA-202ENST00000366764 ANGEL1Q9UNK9 670 aaKnown RBP13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 CUTAO60888 179 aa13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 ANO1Q5XXA6 986 aa13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 KIF5AQ12840 1032 aa13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 MCM6Q14566 821 aa13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 KDRP35968 1356 aa13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 AKR1B15C9JRZ8 316 aaPredicted RBP13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 HOXC9P31274 260 aa13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 CUL4AQ13619 759 aa13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 CCDC152Q4G0S7 254 aa13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 LMBR1LQ6UX01 489 aa13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 GIGYF2Q6Y7W6 1299 aaKnown RBP13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 MLKLQ8NB16 471 aa13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 PLEKHG3A1L390 1219 aa13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 CCDC85AQ96PX6 553 aaPredicted RBP13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 FAM177BA6PVY3 158 aa13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 TNIP1Q15025 636 aa13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 METTL22Q9BUU2 404 aaPredicted RBP13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 TBX22Q9Y458 520 aa13.41□□□□□ -0.26
CDC42BPA-202ENST00000366764 ATP5J2-PTCD1G3V325 749 aa13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 DESP17661 470 aa13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 CDC25BP30305 580 aa13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 GSTO1P78417 241 aa13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 TDRD12Q587J7 1177 aaKnown RBP13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 ERMNQ8TAM6 284 aa13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 RBM28Q9NW13 759 aaKnown RBP13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 ZNF444Q8N0Y2 327 aaPredicted RBP13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 KBTBD3Q8NAB2 608 aa13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 CPLX3Q8WVH0 158 aa13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 STMN4Q9H169 189 aaPredicted RBP13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 LRRC2Q9BYS8 371 aa13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 UGGT1Q9NYU2 1555 aa13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 KAT14Q9H8E8 782 aa13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 CAPN2P17655 700 aa13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 MARCKSP29966 332 aaPredicted RBP13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 RRAGBQ5VZM2 374 aa13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 GPT2Q8TD30 523 aa13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 RPGRIP1Q96KN7 1286 aa13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 CCDC96Q2M329 555 aa13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 ARFGAP2Q8N6H7 521 aa13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 PHF23Q9BUL5 403 aaPredicted RBP13.4□□□□□ -0.26
CDC42BPA-202ENST00000366764 EBAG9O00559 213 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 TMEM87AQ8NBN3 555 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 ABCC3O15438 1527 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 DYDC1Q8WWB3 177 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 ZBTB3Q9H5J0 574 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 LUC7L2Q9Y383 392 aaKnown RBP13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 ATP2B2Q01814 1243 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 SKIDA1Q1XH10 827 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 IFIT1BQ5T764 474 aaKnown RBP13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 ATP5JP18859 108 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 KRT24Q2M2I5 525 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 DSCC1Q9BVC3 393 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 SELENOOQ9BVL4 669 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 ANXA1P04083 346 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 HLTFQ14527 1009 aaKnown RBP eCLIP13.39□□□□□ -0.272e-6■■□□□ 13.6
CDC42BPA-202ENST00000366764 SLC9C2Q5TAH2 1124 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 TAX1BP1Q86VP1 789 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 RNMTO43148 476 aaKnown RBP13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 CCDC40Q4G0X9 1142 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 ZSWIM6Q9HCJ5 1215 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 PNMA6EA0A0J9YXQ4 647 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 APOBRQ0VD83 1088 aa13.39□□□□□ -0.27
CDC42BPA-202ENST00000366764 G2E3Q7L622 706 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 EHMT1Q9H9B1 1298 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 KRT2P35908 639 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 TRAF1Q13077 416 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 TNNI3KQ59H18 835 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 SNRKQ9NRH2 765 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 PA2G4Q9UQ80 394 aaKnown RBP13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 FPGT-TNNI3KV9GXZ4 949 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 NBPF11Q86T75 865 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 KIF20BQ96Q89 1820 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 USP19O94966 1318 aa13.38□□□□□ -0.27
CDC42BPA-202ENST00000366764 KRT28Q7Z3Y7 464 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms