RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 SLFNL1Q499Z3 407 aa1.66□□□□□ -2.14
RNU6-340P-201ENST00000364005 ANGEL2Q5VTE6 544 aaKnown RBP1.66□□□□□ -2.14
RNU6-340P-201ENST00000364005 OGFOD3Q6PK18 319 aa1.66□□□□□ -2.14
RNU6-340P-201ENST00000364005 BARGINQ6ZT62 677 aa1.66□□□□□ -2.14
RNU6-340P-201ENST00000364005 ZFPM1Q8IX07 1006 aa1.66□□□□□ -2.14
RNU6-340P-201ENST00000364005 TNS4Q8IZW8 715 aa1.66□□□□□ -2.14
RNU6-340P-201ENST00000364005 SERBP1Q8NC51 408 aaKnown RBP eCLIP1.66□□□□□ -2.14
RNU6-340P-201ENST00000364005 BAHD1Q8TBE0 780 aaPredicted RBP1.66□□□□□ -2.14
RNU6-340P-201ENST00000364005 FEZF2Q8TBJ5 459 aa1.66□□□□□ -2.14
RNU6-340P-201ENST00000364005 GNL3Q9BVP2 549 aaKnown RBP eCLIP1.66□□□□□ -2.14
RNU6-340P-201ENST00000364005 CHIC2Q9UKJ5 165 aa1.66□□□□□ -2.14
RNU6-340P-201ENST00000364005 PALD1Q9ULE6 856 aa1.66□□□□□ -2.14
RNU6-340P-201ENST00000364005 TRIM66O15016 1216 aa1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 PSAPP07602 524 aa1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 NFICP08651 508 aa1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 EPB42P16452 691 aa1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 HIRAP54198 1017 aaPredicted RBP1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 HIF1AQ16665 826 aa1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 ADAMTSL4Q6UY14 1074 aa1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 FAM181AQ8N9Y4 354 aa1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 SMG8Q8ND04 991 aaKnown RBP1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 GJD4Q96KN9 370 aaPredicted RBP1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 SLC26A8Q96RN1 970 aa1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 BDH2Q9BUT1 245 aa1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 YIPF2Q9BWQ6 316 aa1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 TMPRSS13Q9BYE2 586 aa1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 SUGCTQ9HAC7 445 aa1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 CYP4F12Q9HCS2 524 aa1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 SEMA3GQ9NS98 782 aa1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 ZNF358Q9NW07 568 aa1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 DMGDHQ9UI17 866 aaKnown RBP1.65□□□□□ -2.15
RNU6-340P-201ENST00000364005 OPLAHO14841 1288 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 EPHA1P21709 976 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 INPP5BP32019 993 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 GDF5P43026 501 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 MAP7Q14244 749 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 SKIV2LQ15477 1246 aaKnown RBP1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 SWI5Q1ZZU3 235 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 IER5Q5VY09 327 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 CEP135Q66GS9 1140 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 POTEAQ6S8J7 498 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 XKR5Q6UX68 686 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 CYFIP1Q7L576 1253 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 ZNF575Q86XF7 245 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 ALDH16A1Q8IZ83 802 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 C2CD4AQ8NCU7 369 aaPredicted RBP1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 HRASLS5Q96KN8 279 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 TEPSINQ96N21 525 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 ADAM7Q9H2U9 754 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 C11orf16Q9NQ32 467 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 SH2B1Q9NRF2 756 aaPredicted RBP1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 CHMP3Q9Y3E7 222 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 PCDHGA11Q9Y5H2 935 aa1.64□□□□□ -2.15
RNU6-340P-201ENST00000364005 CYR61O00622 381 aa1.63□□□□□ -2.15
RNU6-340P-201ENST00000364005 MMP20O60882 483 aa1.63□□□□□ -2.15
RNU6-340P-201ENST00000364005 SRFP11831 508 aa1.63□□□□□ -2.15
RNU6-340P-201ENST00000364005 PSMA6P60900 246 aaKnown RBP1.63□□□□□ -2.15
RNU6-340P-201ENST00000364005 ATP11AP98196 1134 aa1.63□□□□□ -2.15
RNU6-340P-201ENST00000364005 ZP2Q05996 745 aa1.63□□□□□ -2.15
RNU6-340P-201ENST00000364005 IFI16Q16666 785 aaKnown RBP1.63□□□□□ -2.15
RNU6-340P-201ENST00000364005 CYP27C1Q4G0S4 372 aa1.63□□□□□ -2.15
RNU6-340P-201ENST00000364005 ZNF385BQ569K4 471 aa1.63□□□□□ -2.15
RNU6-340P-201ENST00000364005 TMEM151BQ8IW70 566 aa1.63□□□□□ -2.15
RNU6-340P-201ENST00000364005 ZMYND15Q9H091 742 aa1.63□□□□□ -2.15
RNU6-340P-201ENST00000364005 C1GALT1Q9NS00 363 aa1.63□□□□□ -2.15
RNU6-340P-201ENST00000364005 CNOT6Q9ULM6 557 aaKnown RBP1.63□□□□□ -2.15
RNU6-340P-201ENST00000364005 BCS1LQ9Y276 419 aa1.63□□□□□ -2.15
RNU6-340P-201ENST00000364005 U3KQE9 123 aa1.63□□□□□ -2.15
RNU6-340P-201ENST00000364005 KRTAP29-1A8MX34 341 aaPredicted RBP1.62□□□□□ -2.15
RNU6-340P-201ENST00000364005 TGFBR3LH3BV60 316 aa1.62□□□□□ -2.15
RNU6-340P-201ENST00000364005 ZMYND10O75800 440 aa1.62□□□□□ -2.15
RNU6-340P-201ENST00000364005 SMNDC1O75940 238 aaKnown RBP eCLIP1.62□□□□□ -2.15
RNU6-340P-201ENST00000364005 C6P13671 934 aa1.62□□□□□ -2.15
RNU6-340P-201ENST00000364005 RAB6AP20340 208 aa1.62□□□□□ -2.15
RNU6-340P-201ENST00000364005 SOX18P35713 384 aa1.62□□□□□ -2.15
RNU6-340P-201ENST00000364005 ACVRL1P37023 503 aa1.62□□□□□ -2.15
RNU6-340P-201ENST00000364005 IDH3AP50213 366 aa1.62□□□□□ -2.15
RNU6-340P-201ENST00000364005 PIP4K2BP78356 416 aa1.62□□□□□ -2.15
RNU6-340P-201ENST00000364005 SOX4Q06945 474 aaPredicted RBP1.62□□□□□ -2.15
RNU6-340P-201ENST00000364005 IKZF1Q13422 519 aa1.62□□□□□ -2.15
RNU6-340P-201ENST00000364005 WNT8BQ93098 351 aa1.62□□□□□ -2.15
RNU6-340P-201ENST00000364005 TSPAN10Q9H1Z9 355 aaPredicted RBP1.62□□□□□ -2.15
RNU6-340P-201ENST00000364005 OSGEPQ9NPF4 335 aa1.62□□□□□ -2.15
RNU6-340P-201ENST00000364005 KCTD3Q9Y597 815 aa1.62□□□□□ -2.15
RNU6-340P-201ENST00000364005 HMCN1Q96RW7 5635 aa1.61□□□□□ -2.15
RNU6-340P-201ENST00000364005 TMEM265A0A087WTH1 108 aa1.61□□□□□ -2.15
RNU6-340P-201ENST00000364005 ZC3H12DA2A288 527 aaKnown RBP1.61□□□□□ -2.15
RNU6-340P-201ENST00000364005 H3BRJ5 948 aa1.61□□□□□ -2.15
RNU6-340P-201ENST00000364005 K7ESM1 405 aa1.61□□□□□ -2.15
RNU6-340P-201ENST00000364005 DYNC1LI2O43237 492 aaPredicted RBP1.61□□□□□ -2.15
RNU6-340P-201ENST00000364005 KRTAP5-8O75690 187 aa1.61□□□□□ -2.15
RNU6-340P-201ENST00000364005 DLGAP3O95886 979 aa1.61□□□□□ -2.15
RNU6-340P-201ENST00000364005 ONECUT2O95948 504 aa1.61□□□□□ -2.15
RNU6-340P-201ENST00000364005 RFC5P40937 340 aa1.61□□□□□ -2.15
RNU6-340P-201ENST00000364005 DLG4P78352 724 aa1.61□□□□□ -2.15
RNU6-340P-201ENST00000364005 ZNF827Q17R98 1081 aa1.61□□□□□ -2.15
RNU6-340P-201ENST00000364005 MAP7D1Q3KQU3 841 aa1.61□□□□□ -2.15
RNU6-340P-201ENST00000364005 SEZ6L2Q6UXD5 910 aa1.61□□□□□ -2.15
RNU6-340P-201ENST00000364005 PLPP7Q8NBV4 271 aa1.61□□□□□ -2.15
RNU6-340P-201ENST00000364005 SYT8Q8NBV8 401 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms