RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 CDC37L1Q7L3B6 337 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 ANKRD18AQ8IVF6 992 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 PDE11AQ9HCR9 933 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 ANO2Q9NQ90 1003 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 ODF2LQ9ULJ1 636 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 WDR33Q9C0J8 1336 aaKnown RBP10.43□□□□□ -0.74
CALD1-201ENST00000361675 SSH2Q76I76 1423 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 ZNF165P49910 485 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 MAP9Q49MG5 647 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 DDX11Q96FC9 970 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 ZBTB40Q9NUA8 1239 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 UBAP1Q9NZ09 502 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 PLEKHG2Q9H7P9 1386 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 TOPAZ1Q8N9V7 1692 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 KIAA0754O94854 1291 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 EFCAB13Q8IY85 973 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 OGFOD1Q8N543 542 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 MRPL50Q8N5N7 158 aaKnown RBP10.43□□□□□ -0.74
CALD1-201ENST00000361675 DNAJC25Q9H1X3 360 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 ZNF232Q9UNY5 417 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 EID1Q9Y6B2 187 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 ARHGAP23Q9P227 1491 aa10.42□□□□□ -0.74
CALD1-201ENST00000361675 ENO4A6NNW6 628 aa10.42□□□□□ -0.74
CALD1-201ENST00000361675 PARNO95453 639 aaKnown RBP10.42□□□□□ -0.74
CALD1-201ENST00000361675 RRM1P23921 792 aa10.42□□□□□ -0.74
CALD1-201ENST00000361675 ELF1P32519 619 aa10.42□□□□□ -0.74
CALD1-201ENST00000361675 CDR1P51861 262 aa10.42□□□□□ -0.74
CALD1-201ENST00000361675 NEDD9Q14511 834 aa10.42□□□□□ -0.74
CALD1-201ENST00000361675 TRIM74Q86UV6 250 aa10.42□□□□□ -0.74
CALD1-201ENST00000361675 TRIM73Q86UV7 250 aa10.42□□□□□ -0.74
CALD1-201ENST00000361675 RPUSD2Q8IZ73 545 aaKnown RBP10.42□□□□□ -0.74
CALD1-201ENST00000361675 KLHL23Q8NBE8 558 aa10.42□□□□□ -0.74
CALD1-201ENST00000361675 EXOC4Q96A65 974 aa10.42□□□□□ -0.74
CALD1-201ENST00000361675 BICC1Q9H694 974 aaKnown RBP10.42□□□□□ -0.74
CALD1-201ENST00000361675 FAN1Q9Y2M0 1017 aa10.42□□□□□ -0.74
CALD1-201ENST00000361675 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.42□□□□□ -0.741e-6■■■□□ 17.8
CALD1-201ENST00000361675 CAPN7Q9Y6W3 813 aa10.42□□□□□ -0.74
CALD1-201ENST00000361675 MAP3K19Q56UN5 1328 aa10.42□□□□□ -0.74
CALD1-201ENST00000361675 RIMS1Q86UR5 1692 aaKnown RBP10.42□□□□□ -0.74
CALD1-201ENST00000361675 PLEKHO1Q53GL0 409 aaPredicted RBP10.42□□□□□ -0.74
CALD1-201ENST00000361675 CPLX2Q6PUV4 134 aaKnown RBP10.42□□□□□ -0.74
CALD1-201ENST00000361675 EIF3JO75822 258 aaKnown RBP10.41□□□□□ -0.74
CALD1-201ENST00000361675 NBPF7P0C2Y1 421 aaPredicted RBP10.41□□□□□ -0.74
CALD1-201ENST00000361675 JMYQ8N9B5 988 aa10.41□□□□□ -0.74
CALD1-201ENST00000361675 NEUROD6Q96NK8 337 aa10.41□□□□□ -0.74
CALD1-201ENST00000361675 GNL3LQ9NVN8 582 aaKnown RBP10.41□□□□□ -0.74
CALD1-201ENST00000361675 RAD50Q92878 1312 aa10.41□□□□□ -0.74
CALD1-201ENST00000361675 A0A087WUV0 522 aaPredicted RBP10.41□□□□□ -0.74
CALD1-201ENST00000361675 HNRNPH1P31943 449 aaKnown RBP10.41□□□□□ -0.74
CALD1-201ENST00000361675 UBE2HP62256 183 aa10.41□□□□□ -0.74
CALD1-201ENST00000361675 ACTN3Q08043 901 aaPredicted RBP10.41□□□□□ -0.74
CALD1-201ENST00000361675 ENOX2Q16206 610 aaKnown RBP10.41□□□□□ -0.74
CALD1-201ENST00000361675 RNF187Q5TA31 235 aaPredicted RBP10.41□□□□□ -0.74
CALD1-201ENST00000361675 JAKMIP3Q5VZ66 844 aa10.41□□□□□ -0.74
CALD1-201ENST00000361675 ZBTB10Q96DT7 871 aa10.41□□□□□ -0.74
CALD1-201ENST00000361675 SCLT1Q96NL6 688 aa10.41□□□□□ -0.74
CALD1-201ENST00000361675 MAGEC2Q9UBF1 373 aaPredicted RBP10.41□□□□□ -0.74
CALD1-201ENST00000361675 TBX22Q9Y458 520 aa10.41□□□□□ -0.74
CALD1-201ENST00000361675 EIF2S2P20042 333 aaKnown RBP10.41□□□□□ -0.74
CALD1-201ENST00000361675 INPP5BP32019 993 aa10.41□□□□□ -0.74
CALD1-201ENST00000361675 CEBPZQ03701 1054 aaKnown RBP10.41□□□□□ -0.74
CALD1-201ENST00000361675 TYRO3Q06418 890 aa10.41□□□□□ -0.74
CALD1-201ENST00000361675 CCDC15Q0P6D6 951 aa10.41□□□□□ -0.74
CALD1-201ENST00000361675 C11orf96Q7Z7L8 435 aa10.41□□□□□ -0.74
CALD1-201ENST00000361675 CENPOQ9BU64 300 aa10.41□□□□□ -0.74
CALD1-201ENST00000361675 SLIT1O75093 1534 aa10.41□□□□□ -0.74
CALD1-201ENST00000361675 A0A1B0GUA9 196 aa10.4□□□□□ -0.74
CALD1-201ENST00000361675 RBM47A0AV96 593 aaKnown RBP10.4□□□□□ -0.74
CALD1-201ENST00000361675 FER1L4A9Z1Z3 1794 aa10.4□□□□□ -0.74
CALD1-201ENST00000361675 KIF5CO60282 957 aa10.4□□□□□ -0.74
CALD1-201ENST00000361675 HMMRO75330 724 aa10.4□□□□□ -0.74
CALD1-201ENST00000361675 CCT5P48643 541 aa10.4□□□□□ -0.74
CALD1-201ENST00000361675 ZNF75DP51815 510 aa10.4□□□□□ -0.74
CALD1-201ENST00000361675 CCDC144BQ3MJ40 725 aa10.4□□□□□ -0.74
CALD1-201ENST00000361675 CCDC144CPQ8IYA2 1237 aa10.4□□□□□ -0.74
CALD1-201ENST00000361675 MPHOSPH6Q99547 160 aaKnown RBP10.4□□□□□ -0.74
CALD1-201ENST00000361675 USP26Q9BXU7 913 aa10.4□□□□□ -0.74
CALD1-201ENST00000361675 ATG3Q9NT62 314 aa10.4□□□□□ -0.74
CALD1-201ENST00000361675 MAP3K20Q9NYL2 800 aaKnown RBP10.4□□□□□ -0.74
CALD1-201ENST00000361675 FBXO9Q9UK97 447 aaPredicted RBP10.4□□□□□ -0.74
CALD1-201ENST00000361675 EBAG9O00559 213 aa10.4□□□□□ -0.74
CALD1-201ENST00000361675 CYP2E1P05181 493 aaPredicted RBP10.4□□□□□ -0.74
CALD1-201ENST00000361675 CORO7P57737 925 aa10.4□□□□□ -0.74
CALD1-201ENST00000361675 TSGA10IPQ3SY00 556 aa10.4□□□□□ -0.74
CALD1-201ENST00000361675 MYLK4Q86YV6 388 aaPredicted RBP10.4□□□□□ -0.74
CALD1-201ENST00000361675 SIRT2Q8IXJ6 389 aa10.4□□□□□ -0.74
CALD1-201ENST00000361675 RSPH1Q8WYR4 309 aa10.4□□□□□ -0.74
CALD1-201ENST00000361675 SH3BGRP55822 239 aaPredicted RBP10.4□□□□□ -0.75
CALD1-201ENST00000361675 RBBP5Q15291 538 aaKnown RBP10.4□□□□□ -0.75
CALD1-201ENST00000361675 TWISTNBQ3B726 338 aaPredicted RBP10.4□□□□□ -0.75
CALD1-201ENST00000361675 SLFNL1Q499Z3 407 aa10.4□□□□□ -0.75
CALD1-201ENST00000361675 WWC2Q6AWC2 1192 aa10.4□□□□□ -0.75
CALD1-201ENST00000361675 ERC1Q8IUD2 1116 aa10.4□□□□□ -0.75
CALD1-201ENST00000361675 PAF1Q8N7H5 531 aa10.4□□□□□ -0.75
CALD1-201ENST00000361675 CBX8Q9HC52 389 aa10.4□□□□□ -0.75
CALD1-201ENST00000361675 ATP6V1DQ9Y5K8 247 aa10.4□□□□□ -0.75
CALD1-201ENST00000361675 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.39□□□□□ -0.75
CALD1-201ENST00000361675 ZBTB7BO15156 539 aaPredicted RBP10.39□□□□□ -0.75
CALD1-201ENST00000361675 NUCB1Q02818 461 aa10.39□□□□□ -0.75
CALD1-201ENST00000361675 SNX1Q13596 522 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms