RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 TXNDC16Q9P2K2 825 aa12.41□□□□□ -0.42
CLIP1-203ENST00000361654 TFIP11Q9UBB9 837 aaKnown RBP12.41□□□□□ -0.42
CLIP1-203ENST00000361654 DNM2P50570 870 aa12.4□□□□□ -0.42
CLIP1-203ENST00000361654 PABPC4Q13310 644 aaKnown RBP eCLIP12.4□□□□□ -0.42
CLIP1-203ENST00000361654 MICALCLQ6ZW33 695 aa12.4□□□□□ -0.42
CLIP1-203ENST00000361654 HAUS2Q9NVX0 235 aa12.4□□□□□ -0.42
CLIP1-203ENST00000361654 BICDL2A1A5D9 508 aa12.4□□□□□ -0.42
CLIP1-203ENST00000361654 SH3BP5O60239 455 aa12.4□□□□□ -0.42
CLIP1-203ENST00000361654 PLCB3Q01970 1234 aa12.4□□□□□ -0.42
CLIP1-203ENST00000361654 WDR44Q5JSH3 913 aa12.4□□□□□ -0.42
CLIP1-203ENST00000361654 STK24Q9Y6E0 443 aa12.4□□□□□ -0.42
CLIP1-203ENST00000361654 TRPM2O94759 1503 aa12.4□□□□□ -0.42
CLIP1-203ENST00000361654 KRT2P35908 639 aa12.4□□□□□ -0.42
CLIP1-203ENST00000361654 HELBQ8NG08 1087 aaPredicted RBP12.4□□□□□ -0.42
CLIP1-203ENST00000361654 NACA2Q9H009 215 aa12.4□□□□□ -0.42
CLIP1-203ENST00000361654 JADE2Q9NQC1 790 aa12.4□□□□□ -0.42
CLIP1-203ENST00000361654 A0A1W2PRG0 241 aa12.4□□□□□ -0.43
CLIP1-203ENST00000361654 ODF2LQ9ULJ1 636 aa12.4□□□□□ -0.43
CLIP1-203ENST00000361654 STX10O60499 249 aa12.39□□□□□ -0.43
CLIP1-203ENST00000361654 DLGAP5Q15398 846 aa12.39□□□□□ -0.43
CLIP1-203ENST00000361654 MIGA1Q8NAN2 632 aa12.39□□□□□ -0.43
CLIP1-203ENST00000361654 RNF34Q969K3 372 aa12.39□□□□□ -0.43
CLIP1-203ENST00000361654 TBX22Q9Y458 520 aa12.39□□□□□ -0.43
CLIP1-203ENST00000361654 FAM169AQ9Y6X4 670 aa12.39□□□□□ -0.43
CLIP1-203ENST00000361654 MAPKBP1O60336 1514 aa12.39□□□□□ -0.43
CLIP1-203ENST00000361654 AFMP43652 599 aa12.39□□□□□ -0.43
CLIP1-203ENST00000361654 KMT5BQ4FZB7 885 aa12.39□□□□□ -0.43
CLIP1-203ENST00000361654 TMC6Q7Z403 805 aa12.39□□□□□ -0.43
CLIP1-203ENST00000361654 AS3MTQ9HBK9 375 aa12.39□□□□□ -0.43
CLIP1-203ENST00000361654 FAM98CQ17RN3 349 aaKnown RBP12.39□□□□□ -0.43
CLIP1-203ENST00000361654 CEP112Q8N8E3 955 aa12.39□□□□□ -0.43
CLIP1-203ENST00000361654 BCS1LQ9Y276 419 aa12.39□□□□□ -0.43
CLIP1-203ENST00000361654 NOC2LQ9Y3T9 749 aaKnown RBP12.39□□□□□ -0.43
CLIP1-203ENST00000361654 STRN3Q13033 797 aa12.39□□□□□ -0.43
CLIP1-203ENST00000361654 GSTA5Q7RTV2 222 aa12.39□□□□□ -0.43
CLIP1-203ENST00000361654 ZSCAN30Q86W11 494 aa12.39□□□□□ -0.43
CLIP1-203ENST00000361654 GABPB2Q8TAK5 448 aaPredicted RBP12.39□□□□□ -0.43
CLIP1-203ENST00000361654 EXOC7Q9UPT5 735 aa12.39□□□□□ -0.43
CLIP1-203ENST00000361654 SOS1Q07889 1333 aaPredicted RBP12.38□□□□□ -0.43
CLIP1-203ENST00000361654 BMP2KLQ5H9B9 411 aa12.38□□□□□ -0.43
CLIP1-203ENST00000361654 ASXL2Q76L83 1435 aa12.38□□□□□ -0.43
CLIP1-203ENST00000361654 ATP2A2P16615 1042 aaKnown RBP12.38□□□□□ -0.43
CLIP1-203ENST00000361654 CLCN1P35523 988 aa12.38□□□□□ -0.43
CLIP1-203ENST00000361654 ATP8B2P98198 1209 aa12.38□□□□□ -0.43
CLIP1-203ENST00000361654 BIRC3Q13489 604 aa12.38□□□□□ -0.43
CLIP1-203ENST00000361654 NOX5Q96PH1 765 aa12.38□□□□□ -0.43
CLIP1-203ENST00000361654 PRDM10Q9NQV6 1147 aa12.38□□□□□ -0.43
CLIP1-203ENST00000361654 MAATS1Q7Z4T9 603 aa12.38□□□□□ -0.43
CLIP1-203ENST00000361654 TBC1D22AQ8WUA7 517 aa12.38□□□□□ -0.43
CLIP1-203ENST00000361654 IP6K1Q92551 441 aa12.38□□□□□ -0.43
CLIP1-203ENST00000361654 KCNG1Q9UIX4 513 aa12.38□□□□□ -0.43
CLIP1-203ENST00000361654 A2MP01023 1474 aa12.38□□□□□ -0.43
CLIP1-203ENST00000361654 NR1I2O75469 434 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 GJC1P36383 396 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 TTC22Q5TAA0 569 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 DTHD1Q6ZMT9 781 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 HAUS7Q99871 368 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 MAK16Q9BXY0 300 aaKnown RBP12.37□□□□□ -0.43
CLIP1-203ENST00000361654 CCDC65Q8IXS2 484 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 TRPC3Q13507 836 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 EP400NLQ6ZTU2 488 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 GINS2Q9Y248 185 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 FRMD4BQ9Y2L6 1034 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 KCNA6P17658 529 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 DNAJC5BQ9UF47 199 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 RBM8AQ9Y5S9 174 aaKnown RBP12.37□□□□□ -0.43
CLIP1-203ENST00000361654 MAP3K5Q99683 1374 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 PPIP5K2O43314 1243 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 PRKG1Q13976 671 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 DCAF15Q66K64 600 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 CCDC50Q8IVM0 306 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 DHX37Q8IY37 1157 aaKnown RBP12.37□□□□□ -0.43
CLIP1-203ENST00000361654 TTC41PQ6P2S7 1318 aa12.37□□□□□ -0.43
CLIP1-203ENST00000361654 ARHGEF10O15013 1369 aa12.36□□□□□ -0.43
CLIP1-203ENST00000361654 EIF4A2Q14240 407 aaKnown RBP12.36□□□□□ -0.43
CLIP1-203ENST00000361654 AKNAD1Q5T1N1 836 aa12.36□□□□□ -0.43
CLIP1-203ENST00000361654 ZNF518AQ6AHZ1 1483 aa12.36□□□□□ -0.43
CLIP1-203ENST00000361654 SPATA24Q86W54 205 aa12.36□□□□□ -0.43
CLIP1-203ENST00000361654 PDE8AO60658 829 aa12.36□□□□□ -0.43
CLIP1-203ENST00000361654 KIFAP3Q92845 792 aa12.36□□□□□ -0.43
CLIP1-203ENST00000361654 CUL7Q14999 1698 aa12.36□□□□□ -0.43
CLIP1-203ENST00000361654 PTPDC1A2A3K4 754 aa12.36□□□□□ -0.43
CLIP1-203ENST00000361654 RNMTO43148 476 aaKnown RBP12.36□□□□□ -0.43
CLIP1-203ENST00000361654 PPP1R2P41236 205 aa12.36□□□□□ -0.43
CLIP1-203ENST00000361654 HAUS3Q68CZ6 603 aa12.36□□□□□ -0.43
CLIP1-203ENST00000361654 ARHGAP27Q6ZUM4 889 aa12.36□□□□□ -0.43
CLIP1-203ENST00000361654 NBPF3Q9H094 633 aa12.36□□□□□ -0.43
CLIP1-203ENST00000361654 XRCC6P12956 609 aaKnown RBP eCLIP12.36□□□□□ -0.43
CLIP1-203ENST00000361654 ZNF165P49910 485 aa12.36□□□□□ -0.43
CLIP1-203ENST00000361654 STMN4Q9H169 189 aaPredicted RBP12.36□□□□□ -0.43
CLIP1-203ENST00000361654 ATP6V0A2Q9Y487 856 aa12.36□□□□□ -0.43
CLIP1-203ENST00000361654 URB2Q14146 1524 aaKnown RBP12.36□□□□□ -0.43
CLIP1-203ENST00000361654 CCDC171Q6TFL3 1326 aa12.35□□□□□ -0.43
CLIP1-203ENST00000361654 HARSP12081 509 aaKnown RBP12.35□□□□□ -0.43
CLIP1-203ENST00000361654 PUM3Q15397 648 aaKnown RBP12.35□□□□□ -0.43
CLIP1-203ENST00000361654 FCHSD1Q86WN1 690 aa12.35□□□□□ -0.43
CLIP1-203ENST00000361654 DCPSQ96C86 337 aaKnown RBP12.35□□□□□ -0.43
CLIP1-203ENST00000361654 SBNO2Q9Y2G9 1366 aa12.35□□□□□ -0.43
CLIP1-203ENST00000361654 TACC1O75410 805 aa12.35□□□□□ -0.43
CLIP1-203ENST00000361654 PRPF31Q8WWY3 499 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms