RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 POLD1P28340 1107 aa25.18■■□□□ 1.62
MAP1LC3A-201ENST00000360668 ADD2P35612 726 aa25.18■■□□□ 1.62
MAP1LC3A-201ENST00000360668 SLC4A3P48751 1232 aa25.18■■□□□ 1.62
MAP1LC3A-201ENST00000360668 NECTIN1Q15223 517 aa25.18■■□□□ 1.62
MAP1LC3A-201ENST00000360668 UBE3CQ15386 1083 aa25.18■■□□□ 1.62
MAP1LC3A-201ENST00000360668 RBM8AQ9Y5S9 174 aaKnown RBP25.18■■□□□ 1.62
MAP1LC3A-201ENST00000360668 SLFNL1Q499Z3 407 aa25.18■■□□□ 1.62
MAP1LC3A-201ENST00000360668 CCDC129Q6ZRS4 1044 aa25.18■■□□□ 1.62
MAP1LC3A-201ENST00000360668 OSBP2Q969R2 916 aa25.18■■□□□ 1.62
MAP1LC3A-201ENST00000360668 MYO5AQ9Y4I1 1855 aaKnown RBP25.17■■□□□ 1.62
MAP1LC3A-201ENST00000360668 IDH1O75874 414 aaKnown RBP25.17■■□□□ 1.62
MAP1LC3A-201ENST00000360668 MAP3K12Q12852 859 aa25.17■■□□□ 1.62
MAP1LC3A-201ENST00000360668 WASHC4Q2M389 1173 aa25.17■■□□□ 1.62
MAP1LC3A-201ENST00000360668 SLC9C2Q5TAH2 1124 aa25.17■■□□□ 1.62
MAP1LC3A-201ENST00000360668 FHDC1Q9C0D6 1143 aaPredicted RBP25.17■■□□□ 1.62
MAP1LC3A-201ENST00000360668 GGA1Q9UJY5 639 aa25.17■■□□□ 1.62
MAP1LC3A-201ENST00000360668 ATP6V0A2Q9Y487 856 aa25.17■■□□□ 1.62
MAP1LC3A-201ENST00000360668 SNX14Q9Y5W7 946 aa25.17■■□□□ 1.62
MAP1LC3A-201ENST00000360668 STYK1Q6J9G0 422 aa25.16■■□□□ 1.62
MAP1LC3A-201ENST00000360668 NSFL1CQ9UNZ2 370 aaKnown RBP25.16■■□□□ 1.62
MAP1LC3A-201ENST00000360668 COL1A1P02452 1464 aaPredicted RBP25.16■■□□□ 1.62
MAP1LC3A-201ENST00000360668 LTBP1Q14766 1721 aa25.15■■□□□ 1.62
MAP1LC3A-201ENST00000360668 M0R2C6 588 aa25.15■■□□□ 1.62
MAP1LC3A-201ENST00000360668 PDE6AP16499 860 aa25.15■■□□□ 1.62
MAP1LC3A-201ENST00000360668 PRPF40BQ6NWY9 871 aaKnown RBP25.15■■□□□ 1.62
MAP1LC3A-201ENST00000360668 SLC51AQ86UW1 340 aa25.15■■□□□ 1.62
MAP1LC3A-201ENST00000360668 C2CD5Q86YS7 1000 aa25.15■■□□□ 1.62
MAP1LC3A-201ENST00000360668 DSCC1Q9BVC3 393 aa25.15■■□□□ 1.62
MAP1LC3A-201ENST00000360668 U3KPZ7 1027 aaPredicted RBP25.15■■□□□ 1.62
MAP1LC3A-201ENST00000360668 MYH13Q9UKX3 1938 aa25.15■■□□□ 1.62
MAP1LC3A-201ENST00000360668 H0YIN7 160 aa25.14■■□□□ 1.62
MAP1LC3A-201ENST00000360668 ST18O60284 1047 aa25.14■■□□□ 1.62
MAP1LC3A-201ENST00000360668 SYT17Q9BSW7 474 aa25.14■■□□□ 1.62
MAP1LC3A-201ENST00000360668 IQSEC3Q9UPP2 1182 aaPredicted RBP25.14■■□□□ 1.62
MAP1LC3A-201ENST00000360668 TCRBV5S4A2TA0A5A2 114 aa25.14■■□□□ 1.61
MAP1LC3A-201ENST00000360668 UFL1O94874 794 aa25.14■■□□□ 1.61
MAP1LC3A-201ENST00000360668 RNF20Q5VTR2 975 aa25.14■■□□□ 1.61
MAP1LC3A-201ENST00000360668 CREB3L3Q68CJ9 461 aa25.14■■□□□ 1.61
MAP1LC3A-201ENST00000360668 TXNRD3Q86VQ6 643 aa25.14■■□□□ 1.61
MAP1LC3A-201ENST00000360668 RASEFQ8IZ41 740 aa25.14■■□□□ 1.61
MAP1LC3A-201ENST00000360668 WWC3Q9ULE0 1092 aa25.14■■□□□ 1.61
MAP1LC3A-201ENST00000360668 ZNF532Q9HCE3 1301 aa25.13■■□□□ 1.61
MAP1LC3A-201ENST00000360668 ZKSCAN1P17029 563 aaPredicted RBP25.13■■□□□ 1.61
MAP1LC3A-201ENST00000360668 SLC27A2O14975 620 aa25.12■■□□□ 1.61
MAP1LC3A-201ENST00000360668 FRAT2O75474 233 aaPredicted RBP25.12■■□□□ 1.61
MAP1LC3A-201ENST00000360668 ZNF804AQ7Z570 1209 aa25.12■■□□□ 1.61
MAP1LC3A-201ENST00000360668 PUS7LQ9H0K6 701 aaKnown RBP25.12■■□□□ 1.61
MAP1LC3A-201ENST00000360668 C10orf71Q711Q0 1435 aa25.11■■□□□ 1.61
MAP1LC3A-201ENST00000360668 CD2BP2O95400 341 aaKnown RBP25.11■■□□□ 1.61
MAP1LC3A-201ENST00000360668 TBC1D16Q8TBP0 767 aa25.11■■□□□ 1.61
MAP1LC3A-201ENST00000360668 ZNF622Q969S3 477 aaKnown RBP eCLIP25.11■■□□□ 1.61
MAP1LC3A-201ENST00000360668 LRP2BPQ9P2M1 347 aa25.11■■□□□ 1.61
MAP1LC3A-201ENST00000360668 HSPD1P10809 573 aaKnown RBP25.1■■□□□ 1.61
MAP1LC3A-201ENST00000360668 TSGA10IPQ3SY00 556 aa25.1■■□□□ 1.61
MAP1LC3A-201ENST00000360668 MAGEB6Q8N7X4 407 aa25.1■■□□□ 1.61
MAP1LC3A-201ENST00000360668 K7ELQ4 463 aaPredicted RBP25.1■■□□□ 1.61
MAP1LC3A-201ENST00000360668 NEK4P51957 841 aa25.1■■□□□ 1.61
MAP1LC3A-201ENST00000360668 TDRD7Q8NHU6 1098 aaKnown RBP25.1■■□□□ 1.61
MAP1LC3A-201ENST00000360668 TM6SF1Q9BZW5 370 aa25.1■■□□□ 1.61
MAP1LC3A-201ENST00000360668 TMX4Q9H1E5 349 aaPredicted RBP25.1■■□□□ 1.61
MAP1LC3A-201ENST00000360668 POLLQ9UGP5 575 aa25.1■■□□□ 1.61
MAP1LC3A-201ENST00000360668 GPAA1O43292 621 aa25.09■■□□□ 1.61
MAP1LC3A-201ENST00000360668 VPS53Q5VIR6 699 aa25.09■■□□□ 1.61
MAP1LC3A-201ENST00000360668 CNKSR1Q969H4 720 aa25.09■■□□□ 1.61
MAP1LC3A-201ENST00000360668 IGSF3O75054 1194 aa25.08■■□□□ 1.61
MAP1LC3A-201ENST00000360668 MCM2P49736 904 aa25.08■■□□□ 1.61
MAP1LC3A-201ENST00000360668 ABCF2Q9UG63 623 aa25.08■■□□□ 1.61
MAP1LC3A-201ENST00000360668 TMED8Q6PL24 325 aaPredicted RBP25.07■■□□□ 1.6
MAP1LC3A-201ENST00000360668 MPNDQ8N594 471 aa25.07■■□□□ 1.6
MAP1LC3A-201ENST00000360668 CACNA1SQ13698 1873 aa25.07■■□□□ 1.6
MAP1LC3A-201ENST00000360668 C6orf229H3BNL8 230 aa25.06■■□□□ 1.6
MAP1LC3A-201ENST00000360668 GPR101Q96P66 508 aaPredicted RBP25.06■■□□□ 1.6
MAP1LC3A-201ENST00000360668 SALL1Q9NSC2 1324 aa25.06■■□□□ 1.6
MAP1LC3A-201ENST00000360668 IL1R1P14778 569 aa25.05■■□□□ 1.6
MAP1LC3A-201ENST00000360668 PSMA5P28066 241 aa25.05■■□□□ 1.6
MAP1LC3A-201ENST00000360668 CHRNA5P30532 468 aa25.05■■□□□ 1.6
MAP1LC3A-201ENST00000360668 KRT32Q14532 448 aa25.05■■□□□ 1.6
MAP1LC3A-201ENST00000360668 ZGPATQ8N5A5 531 aaKnown RBP25.05■■□□□ 1.6
MAP1LC3A-201ENST00000360668 RAI14Q9P0K7 980 aa25.05■■□□□ 1.6
MAP1LC3A-201ENST00000360668 CTNNA3Q9UI47 895 aa25.05■■□□□ 1.6
MAP1LC3A-201ENST00000360668 RPAP1Q9BWH6 1393 aaPredicted RBP25.05■■□□□ 1.6
MAP1LC3A-201ENST00000360668 CHAF1AQ13111 956 aaPredicted RBP25.05■■□□□ 1.6
MAP1LC3A-201ENST00000360668 DPP8Q6V1X1 898 aaPredicted RBP25.05■■□□□ 1.6
MAP1LC3A-201ENST00000360668 WDR66Q8TBY9 1149 aa25.05■■□□□ 1.6
MAP1LC3A-201ENST00000360668 AIDAQ96BJ3 306 aa25.05■■□□□ 1.6
MAP1LC3A-201ENST00000360668 JAKMIP1Q96N16 626 aaKnown RBP25.05■■□□□ 1.6
MAP1LC3A-201ENST00000360668 UPF3BQ9BZI7 483 aaKnown RBP25.05■■□□□ 1.6
MAP1LC3A-201ENST00000360668 ZSWIM6Q9HCJ5 1215 aa25.05■■□□□ 1.6
MAP1LC3A-201ENST00000360668 CD209Q9NNX6 404 aa25.05■■□□□ 1.6
MAP1LC3A-201ENST00000360668 DUOX1Q9NRD9 1551 aa25.05■■□□□ 1.6
MAP1LC3A-201ENST00000360668 DLEC1Q9Y238 1755 aa25.04■■□□□ 1.6
MAP1LC3A-201ENST00000360668 FOXP2O15409 715 aa25.04■■□□□ 1.6
MAP1LC3A-201ENST00000360668 ADCK5Q3MIX3 580 aa25.04■■□□□ 1.6
MAP1LC3A-201ENST00000360668 SPTY2D1Q68D10 685 aaPredicted RBP25.04■■□□□ 1.6
MAP1LC3A-201ENST00000360668 KLHL34Q8N239 644 aa25.04■■□□□ 1.6
MAP1LC3A-201ENST00000360668 STRBPQ96SI9 672 aaKnown RBP25.04■■□□□ 1.6
MAP1LC3A-201ENST00000360668 SLX4Q8IY92 1834 aa25.04■■□□□ 1.6
MAP1LC3A-201ENST00000360668 KIF13BQ9NQT8 1826 aa25.03■■□□□ 1.6
MAP1LC3A-201ENST00000360668 CYP21A2P08686 494 aa25.03■■□□□ 1.6
MAP1LC3A-201ENST00000360668 CASTP20810 708 aaKnown RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms