RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 CCDC184Q52MB2 194 aa14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 TMX3Q96JJ7 454 aa14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 BCAP29Q9UHQ4 241 aa14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 IFIT3O14879 490 aaKnown RBP14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 RLBP1P12271 317 aa14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 VPS52Q8N1B4 723 aa14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 FAM169AQ9Y6X4 670 aa14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 BMP2KLQ5H9B9 411 aa14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 SEPT10Q9P0V9 454 aa14.84□□□□□ -0.03
SRGAP3-201ENST00000360413 SETD1BQ9UPS6 1966 aaKnown RBP14.83□□□□□ -0.03
SRGAP3-201ENST00000360413 SDCCAG8Q86SQ7 713 aaPredicted RBP14.83□□□□□ -0.03
SRGAP3-201ENST00000360413 CROCCP2Q86T23 111 aa14.83□□□□□ -0.03
SRGAP3-201ENST00000360413 NCOA2Q15596 1464 aa14.83□□□□□ -0.03
SRGAP3-201ENST00000360413 RBM26Q5T8P6 1007 aaKnown RBP14.83□□□□□ -0.04
SRGAP3-201ENST00000360413 RAB11FIP4Q86YS3 637 aa14.83□□□□□ -0.04
SRGAP3-201ENST00000360413 ARHGAP24Q8N264 748 aa14.83□□□□□ -0.04
SRGAP3-201ENST00000360413 MFSD6Q6ZSS7 791 aa14.83□□□□□ -0.04
SRGAP3-201ENST00000360413 KRT23Q9C075 422 aa14.83□□□□□ -0.04
SRGAP3-201ENST00000360413 STAT6P42226 847 aa14.83□□□□□ -0.04
SRGAP3-201ENST00000360413 CABS1Q96KC9 395 aa14.83□□□□□ -0.04
SRGAP3-201ENST00000360413 CRNKL1Q9BZJ0 848 aaKnown RBP14.83□□□□□ -0.04
SRGAP3-201ENST00000360413 MTUS1Q9ULD2 1270 aa14.83□□□□□ -0.04
SRGAP3-201ENST00000360413 MUM1L1Q5H9M0 696 aa14.83□□□□□ -0.04
SRGAP3-201ENST00000360413 OGFOD1Q8N543 542 aa14.83□□□□□ -0.04
SRGAP3-201ENST00000360413 IFNKQ9P0W0 207 aa14.83□□□□□ -0.04
SRGAP3-201ENST00000360413 TRPC3Q13507 836 aa14.83□□□□□ -0.04
SRGAP3-201ENST00000360413 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.83□□□□□ -0.04
SRGAP3-201ENST00000360413 HGSO14964 777 aaPredicted RBP14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 TACO1Q9BSH4 297 aaKnown RBP14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 STK24Q9Y6E0 443 aa14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 RTL1A6NKG5 1358 aa14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 HSPA1LP34931 641 aa14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 UBXN1Q04323 297 aa14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 RSPH3Q86UC2 560 aa14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 CAPN7Q9Y6W3 813 aa14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 CUL4BQ13620 913 aa14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 PTPRCP08575 1304 aa14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 GOLGA6BA6NDN3 693 aa14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 PSMA7O14818 248 aa14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 IARSP41252 1262 aaKnown RBP14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 INF2Q27J81 1249 aa14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 ALDH1L2Q3SY69 923 aa14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 MRPS27Q92552 414 aaKnown RBP14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 EVI5LQ96CN4 794 aa14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 USP16Q9Y5T5 823 aa14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 PSMD6Q15008 389 aa14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 CCDC26Q8TAB7 109 aa14.82□□□□□ -0.04
SRGAP3-201ENST00000360413 PPP1R2P41236 205 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 RUFY3Q7L099 469 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 KIFAP3Q92845 792 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 HAUS7Q99871 368 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 TACC3Q9Y6A5 838 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 MGEA5O60502 916 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 PPP1R42Q7Z4L9 355 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 C16orf71Q8IYS4 520 aaPredicted RBP14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 STK38LQ9Y2H1 464 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 E7EVH7 732 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 CALML3P27482 149 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 BAG1Q99933 345 aaPredicted RBP14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 ORC3Q9UBD5 711 aaPredicted RBP14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 FRMD3A2A2Y4 597 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 OPHN1O60890 802 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 BRDTQ58F21 947 aaPredicted RBP14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 ANKRD24Q8TF21 1146 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 PFDN4Q9NQP4 134 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 CALCOCO2Q13137 446 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 VSIG1Q86XK7 387 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 RIPOR2Q9Y4F9 1068 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 METAP2P50579 478 aaKnown RBP eCLIP14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 PLCB3Q01970 1234 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 DNM1Q05193 864 aaKnown RBP14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 DBN1Q16643 649 aa14.81□□□□□ -0.04
SRGAP3-201ENST00000360413 CALM1P0DP23 149 aa14.8□□□□□ -0.04
SRGAP3-201ENST00000360413 CALM2P0DP24 149 aa14.8□□□□□ -0.04
SRGAP3-201ENST00000360413 CALM3P0DP25 149 aa14.8□□□□□ -0.04
SRGAP3-201ENST00000360413 PLCG2P16885 1265 aa14.8□□□□□ -0.04
SRGAP3-201ENST00000360413 RARSP54136 660 aaKnown RBP14.8□□□□□ -0.04
SRGAP3-201ENST00000360413 HAUS8Q9BT25 410 aa14.8□□□□□ -0.04
SRGAP3-201ENST00000360413 LUC7L3O95232 432 aaKnown RBP14.8□□□□□ -0.04
SRGAP3-201ENST00000360413 EEF2P13639 858 aaKnown RBP14.8□□□□□ -0.04
SRGAP3-201ENST00000360413 RILPL1Q5EBL4 403 aa14.8□□□□□ -0.04
SRGAP3-201ENST00000360413 GJC1P36383 396 aa14.8□□□□□ -0.04
SRGAP3-201ENST00000360413 NFE2L2Q16236 605 aa14.8□□□□□ -0.04
SRGAP3-201ENST00000360413 CDK19Q9BWU1 502 aa14.8□□□□□ -0.04
SRGAP3-201ENST00000360413 CERS3Q8IU89 383 aa14.8□□□□□ -0.04
SRGAP3-201ENST00000360413 HVCN1Q96D96 273 aa14.8□□□□□ -0.04
SRGAP3-201ENST00000360413 CAMSAP2Q08AD1 1489 aa14.8□□□□□ -0.04
SRGAP3-201ENST00000360413 UTP11Q9Y3A2 253 aaKnown RBP14.8□□□□□ -0.04
SRGAP3-201ENST00000360413 IRX4P78413 519 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 CCDC122Q5T0U0 273 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 SLC8A1P32418 973 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 GEN1Q17RS7 908 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 HS2ST1Q7LGA3 356 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 UAP1Q16222 522 aaPredicted RBP14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 TSPY2A6NKD2 308 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 SPDYE3A6NKU9 549 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 MICU3Q86XE3 530 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 VTI1AQ96AJ9 217 aa14.79□□□□□ -0.04
SRGAP3-201ENST00000360413 XAB2Q9HCS7 855 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms