RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 OAS2P29728 719 aaKnown RBP17.32■□□□□ 0.36
UBAP1-202ENST00000359544 BRF1Q92994 677 aa17.32■□□□□ 0.36
UBAP1-202ENST00000359544 HMG20BQ9P0W2 317 aa17.32■□□□□ 0.36
UBAP1-202ENST00000359544 RSPH14Q9UHP6 348 aa17.32■□□□□ 0.36
UBAP1-202ENST00000359544 TNS1Q9HBL0 1735 aaKnown RBP17.32■□□□□ 0.36
UBAP1-202ENST00000359544 TADA3O75528 432 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 FAM160A1Q05DH4 1040 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 ATL3Q6DD88 541 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 ZNF530Q6P9A1 599 aaPredicted RBP17.31■□□□□ 0.36
UBAP1-202ENST00000359544 MPRIPQ6WCQ1 1025 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 GOLGA5Q8TBA6 731 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 PSD3Q9NYI0 1048 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 DNAI1Q9UI46 699 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 RCOR1Q9UKL0 485 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 SBF2Q86WG5 1849 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 PHKG2P15735 406 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 GORABQ5T7V8 394 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 ARMCX5Q6P1M9 558 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 TMC6Q7Z403 805 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 CCDC191Q8NCU4 936 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 NECTIN2Q92692 538 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 CAMKK2Q96RR4 588 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 BPIFA3Q9BQP9 254 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 YY1AP1Q9H869 796 aa17.31■□□□□ 0.36
UBAP1-202ENST00000359544 STK3Q13188 491 aa17.3■□□□□ 0.36
UBAP1-202ENST00000359544 LRRFIP1Q32MZ4 808 aaKnown RBP17.3■□□□□ 0.36
UBAP1-202ENST00000359544 CHMP4AQ9BY43 222 aa17.3■□□□□ 0.36
UBAP1-202ENST00000359544 MYO1CO00159 1063 aa17.3■□□□□ 0.36
UBAP1-202ENST00000359544 SMC2O95347 1197 aa17.3■□□□□ 0.36
UBAP1-202ENST00000359544 IFIT2P09913 472 aaKnown RBP17.3■□□□□ 0.36
UBAP1-202ENST00000359544 ST5P78524 1137 aa17.3■□□□□ 0.36
UBAP1-202ENST00000359544 SMC1AQ14683 1233 aaKnown RBP17.3■□□□□ 0.36
UBAP1-202ENST00000359544 ERC1Q8IUD2 1116 aa17.3■□□□□ 0.36
UBAP1-202ENST00000359544 KDRP35968 1356 aa17.3■□□□□ 0.36
UBAP1-202ENST00000359544 ZRSR1Q15695 479 aaKnown RBP17.29■□□□□ 0.36
UBAP1-202ENST00000359544 EXOC4Q96A65 974 aa17.29■□□□□ 0.36
UBAP1-202ENST00000359544 GOLPH3LQ9H4A5 285 aa17.29■□□□□ 0.36
UBAP1-202ENST00000359544 MYH15Q9Y2K3 1946 aa17.29■□□□□ 0.36
UBAP1-202ENST00000359544 CASQ1P31415 396 aa17.29■□□□□ 0.36
UBAP1-202ENST00000359544 KRT32Q14532 448 aa17.29■□□□□ 0.36
UBAP1-202ENST00000359544 TSGA10IPQ3SY00 556 aa17.29■□□□□ 0.36
UBAP1-202ENST00000359544 PLEKHO1Q53GL0 409 aaPredicted RBP17.29■□□□□ 0.36
UBAP1-202ENST00000359544 PROM2Q8N271 834 aa17.29■□□□□ 0.36
UBAP1-202ENST00000359544 FBXO18Q8NFZ0 1043 aa17.29■□□□□ 0.36
UBAP1-202ENST00000359544 ZNF396Q96N95 335 aaPredicted RBP17.29■□□□□ 0.36
UBAP1-202ENST00000359544 TBC1D8O95759 1140 aa17.28■□□□□ 0.36
UBAP1-202ENST00000359544 NMIQ13287 307 aaPredicted RBP17.28■□□□□ 0.36
UBAP1-202ENST00000359544 CC2D1AQ6P1N0 951 aaPredicted RBP17.28■□□□□ 0.36
UBAP1-202ENST00000359544 GPR161Q8N6U8 529 aaKnown RBP17.28■□□□□ 0.36
UBAP1-202ENST00000359544 GOLGA6L1Q8N7Z2 621 aa17.28■□□□□ 0.36
UBAP1-202ENST00000359544 NFATC2IPQ8NCF5 419 aa17.28■□□□□ 0.36
UBAP1-202ENST00000359544 ENGASEQ8NFI3 743 aa17.28■□□□□ 0.36
UBAP1-202ENST00000359544 XPO4Q9C0E2 1151 aaKnown RBP17.28■□□□□ 0.36
UBAP1-202ENST00000359544 BABAM1Q9NWV8 329 aa17.28■□□□□ 0.36
UBAP1-202ENST00000359544 JAK2O60674 1132 aa17.28■□□□□ 0.36
UBAP1-202ENST00000359544 SEC31AO94979 1220 aaKnown RBP17.28■□□□□ 0.36
UBAP1-202ENST00000359544 NAA16Q6N069 864 aaPredicted RBP17.28■□□□□ 0.36
UBAP1-202ENST00000359544 IFNL2Q8IZJ0 200 aa17.28■□□□□ 0.36
UBAP1-202ENST00000359544 TCEANC2Q96MN5 208 aa17.28■□□□□ 0.36
UBAP1-202ENST00000359544 IFNKQ9P0W0 207 aa17.28■□□□□ 0.36
UBAP1-202ENST00000359544 DOT1LQ8TEK3 1739 aa17.28■□□□□ 0.36
UBAP1-202ENST00000359544 URI1O94763 535 aaPredicted RBP17.27■□□□□ 0.36
UBAP1-202ENST00000359544 IQUBQ8NA54 791 aa17.27■□□□□ 0.36
UBAP1-202ENST00000359544 EVCP57679 992 aa17.27■□□□□ 0.36
UBAP1-202ENST00000359544 CEBPZQ03701 1054 aaKnown RBP17.27■□□□□ 0.36
UBAP1-202ENST00000359544 C10orf67Q8IYJ2 551 aa17.27■□□□□ 0.36
UBAP1-202ENST00000359544 FAM227BQ96M60 508 aa17.27■□□□□ 0.36
UBAP1-202ENST00000359544 ARFGAP3Q9NP61 516 aa17.27■□□□□ 0.36
UBAP1-202ENST00000359544 PKD1L3Q7Z443 1732 aa17.27■□□□□ 0.35
UBAP1-202ENST00000359544 ADD1P35611 737 aaKnown RBP17.26■□□□□ 0.35
UBAP1-202ENST00000359544 NOP2P46087 812 aaKnown RBP17.26■□□□□ 0.35
UBAP1-202ENST00000359544 NOM1Q5C9Z4 860 aaKnown RBP17.26■□□□□ 0.35
UBAP1-202ENST00000359544 SRLQ86TD4 932 aa17.26■□□□□ 0.35
UBAP1-202ENST00000359544 FSIP1Q8NA03 581 aa17.26■□□□□ 0.35
UBAP1-202ENST00000359544 LLPHQ9BRT6 129 aaKnown RBP17.26■□□□□ 0.35
UBAP1-202ENST00000359544 CARD6Q9BX69 1037 aa17.26■□□□□ 0.35
UBAP1-202ENST00000359544 FCHSD1Q86WN1 690 aa17.26■□□□□ 0.35
UBAP1-202ENST00000359544 DDX11Q96FC9 970 aa17.26■□□□□ 0.35
UBAP1-202ENST00000359544 LGR6Q9HBX8 967 aa17.26■□□□□ 0.35
UBAP1-202ENST00000359544 BCL9O00512 1426 aa17.25■□□□□ 0.35
UBAP1-202ENST00000359544 SASH3O75995 380 aa17.25■□□□□ 0.35
UBAP1-202ENST00000359544 NBPF7P0C2Y1 421 aaPredicted RBP17.25■□□□□ 0.35
UBAP1-202ENST00000359544 MTX1Q13505 466 aa17.25■□□□□ 0.35
UBAP1-202ENST00000359544 HDGFL1Q5TGJ6 251 aa17.25■□□□□ 0.35
UBAP1-202ENST00000359544 JAKMIP3Q5VZ66 844 aa17.25■□□□□ 0.35
UBAP1-202ENST00000359544 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.25■□□□□ 0.357e-8■■■□□ 16.8
UBAP1-202ENST00000359544 MED23Q9ULK4 1368 aa17.25■□□□□ 0.35
UBAP1-202ENST00000359544 ZSCAN12O43309 604 aa17.25■□□□□ 0.35
UBAP1-202ENST00000359544 IVLP07476 585 aa17.25■□□□□ 0.35
UBAP1-202ENST00000359544 TRIM65Q6PJ69 517 aa17.25■□□□□ 0.35
UBAP1-202ENST00000359544 MPHOSPH8Q99549 860 aa17.25■□□□□ 0.35
UBAP1-202ENST00000359544 DHX16O60231 1041 aaKnown RBP17.24■□□□□ 0.35
UBAP1-202ENST00000359544 HSP90B1P14625 803 aaKnown RBP17.24■□□□□ 0.35
UBAP1-202ENST00000359544 C1orf141Q5JVX7 400 aa17.24■□□□□ 0.35
UBAP1-202ENST00000359544 PIGBQ92521 554 aa17.24■□□□□ 0.35
UBAP1-202ENST00000359544 SDF4Q9BRK5 362 aa17.24■□□□□ 0.35
UBAP1-202ENST00000359544 RRP15Q9Y3B9 282 aaKnown RBP17.24■□□□□ 0.35
UBAP1-202ENST00000359544 PARP3Q9Y6F1 533 aa17.24■□□□□ 0.35
UBAP1-202ENST00000359544 TOGARAM1Q9Y4F4 1720 aa17.24■□□□□ 0.35
UBAP1-202ENST00000359544 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms