RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 HAND2P61296 217 aa10.89□□□□□ -0.67
GTF3C2-202ENST00000359541 PUM3Q15397 648 aaKnown RBP10.89□□□□□ -0.67
GTF3C2-202ENST00000359541 SLC9C2Q5TAH2 1124 aa10.89□□□□□ -0.67
GTF3C2-202ENST00000359541 AIDAQ96BJ3 306 aa10.89□□□□□ -0.67
GTF3C2-202ENST00000359541 PAPPAQ13219 1627 aa10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 KLF18A0A0U1RQI7 1052 aa10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 CYP19A1P11511 503 aaPredicted RBP10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 LIG1P18858 919 aa10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 PDIA3P30101 505 aaKnown RBP10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 CEBPZQ03701 1054 aaKnown RBP10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 MAP3K12Q12852 859 aa10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 CHAF1AQ13111 956 aaPredicted RBP10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 GREM2Q9H772 168 aa10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 R3HCC1Q9Y3T6 440 aaKnown RBP10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 WDR19Q8NEZ3 1342 aa10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 NUP188Q5SRE5 1749 aa10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 CKAP2LQ8IYA6 745 aa10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 FBXL16Q8N461 479 aa10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 LPIN2Q92539 896 aa10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 PDE8BO95263 885 aa10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 IGHMBP2P38935 993 aaKnown RBP10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 TRIM29Q14134 588 aa10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 STK38Q15208 465 aa10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 UBE3CQ15386 1083 aa10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 NAT10Q9H0A0 1025 aaKnown RBP10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 ZBTB1Q9Y2K1 713 aa10.88□□□□□ -0.67
GTF3C2-202ENST00000359541 BECN2A8MW95 431 aa10.87□□□□□ -0.67
GTF3C2-202ENST00000359541 FGAP02671 866 aa10.87□□□□□ -0.67
GTF3C2-202ENST00000359541 CHGBP05060 677 aa10.87□□□□□ -0.67
GTF3C2-202ENST00000359541 PARP10Q53GL7 1025 aa10.87□□□□□ -0.67
GTF3C2-202ENST00000359541 NACAP1Q9BZK3 213 aa10.87□□□□□ -0.67
GTF3C2-202ENST00000359541 RIPOR2Q9Y4F9 1068 aa10.87□□□□□ -0.67
GTF3C2-202ENST00000359541 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.87□□□□□ -0.67
GTF3C2-202ENST00000359541 ORC3Q9UBD5 711 aaPredicted RBP10.87□□□□□ -0.67
GTF3C2-202ENST00000359541 ZNF652Q9Y2D9 606 aa10.87□□□□□ -0.67
GTF3C2-202ENST00000359541 TTLL5Q6EMB2 1281 aa10.87□□□□□ -0.67
GTF3C2-202ENST00000359541 NFXL1Q6ZNB6 911 aa10.87□□□□□ -0.67
GTF3C2-202ENST00000359541 BRAPQ7Z569 592 aa10.87□□□□□ -0.67
GTF3C2-202ENST00000359541 CCAR1Q8IX12 1150 aaKnown RBP10.87□□□□□ -0.67
GTF3C2-202ENST00000359541 FUCA2Q9BTY2 467 aa10.87□□□□□ -0.67
GTF3C2-202ENST00000359541 BCL9O00512 1426 aa10.87□□□□□ -0.67
GTF3C2-202ENST00000359541 TCHHQ07283 1943 aa10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 ADD2P35612 726 aa10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 SART3Q15020 963 aaKnown RBP10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 HLFQ16534 295 aa10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 CCDC152Q4G0S7 254 aa10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 ANO6Q4KMQ2 910 aa10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 CHST3Q7LGC8 479 aa10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 UTP14AQ9BVJ6 771 aaKnown RBP10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 TRIM5Q9C035 493 aa10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 CARMIL3Q8ND23 1372 aa10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 ZNF165P49910 485 aa10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 TPM4P67936 248 aa10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 DDB1Q16531 1140 aa10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 STX1AQ16623 288 aa10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 KCNG4Q8TDN1 519 aa10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 NCOA5Q9HCD5 579 aaKnown RBP10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 RCOR1Q9UKL0 485 aa10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 IGSF3O75054 1194 aa10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 TJP1Q07157 1748 aa10.86□□□□□ -0.67
GTF3C2-202ENST00000359541 SLFNL1Q499Z3 407 aa10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 JMYQ8N9B5 988 aa10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 TMEM87BQ96K49 555 aa10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 SDF4Q9BRK5 362 aa10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 NAPBQ9H115 298 aa10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 CCDC87Q9NVE4 849 aa10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 ANO10Q9NW15 660 aa10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 GUCY1B3Q02153 619 aa10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 CCDC102BQ68D86 513 aa10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 PUS7LQ9H0K6 701 aaKnown RBP10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 CNNM2Q9H8M5 875 aa10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 ANGEL1Q9UNK9 670 aaKnown RBP10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 ERICH2A1L162 156 aa10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 MCAMP43121 646 aa10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 METAP2P50579 478 aaKnown RBP eCLIP10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 EVCP57679 992 aa10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 FAM160A1Q05DH4 1040 aa10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 FSIP1Q8NA03 581 aa10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 PIBF1Q8WXW3 757 aa10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 THRAP3Q9Y2W1 955 aaKnown RBP10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 MRVI1Q9Y6F6 885 aa10.85□□□□□ -0.67
GTF3C2-202ENST00000359541 NR1I2O75469 434 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 GNAT2P19087 354 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 COL9A3Q14050 684 aaPredicted RBP10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 CEP57L1Q8IYX8 460 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 RGS22Q8NE09 1264 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 MRPS27Q92552 414 aaKnown RBP10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 SMARCC1Q92922 1105 aaPredicted RBP10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 GNL3LQ9NVN8 582 aaKnown RBP10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 XIRP1Q702N8 1843 aaKnown RBP10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 ATP6V1AP38606 617 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 MB21D2Q8IYB1 491 aaPredicted RBP10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 BBXQ8WY36 941 aaPredicted RBP10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 WASF1Q92558 559 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 ARID4AP29374 1257 aaPredicted RBP10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 SCARF1Q14162 830 aa10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 CDC5LQ99459 802 aaKnown RBP10.84□□□□□ -0.67
GTF3C2-202ENST00000359541 ABCA3Q99758 1704 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms