RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 STK26Q9P289 416 aa15.29■□□□□ 0.04
SPTSSB-201ENST00000359175 ABCC6O95255 1503 aa15.29■□□□□ 0.04
SPTSSB-201ENST00000359175 KIF3CO14782 793 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 STX10O60499 249 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 LIG3P49916 1009 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 POTEDQ86YR6 584 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 USP44Q9H0E7 712 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 VIPAS39Q9H9C1 493 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 PIK3C2BO00750 1634 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 MINK1Q8N4C8 1332 aaPredicted RBP15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 SHOX2O60902 331 aaPredicted RBP15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 PHACTR2O75167 634 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 WDHD1O75717 1129 aaPredicted RBP15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 HSP90B1P14625 803 aaKnown RBP15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 LMOD1P29536 600 aaPredicted RBP15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 DDR1Q08345 913 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 FBXW10Q5XX13 1052 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 CCDC12Q8WUD4 166 aaPredicted RBP15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 TCEANC2Q96MN5 208 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 FTOQ9C0B1 505 aaKnown RBP eCLIP15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 GNL3LQ9NVN8 582 aaKnown RBP15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 PXDNLA1KZ92 1463 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 NPHP4O75161 1426 aaPredicted RBP15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 NEDD4P46934 1319 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 A0A1W2PQ27 194 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 A0A1W2PQ64 194 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 A0A1W2PQD8 194 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 PRPF6O94906 941 aaKnown RBP15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 UBTFL1P0CB47 393 aaPredicted RBP15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 TOP1P11387 765 aaKnown RBP15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 FLIIQ13045 1269 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 WWC2Q6AWC2 1192 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 MIEF2Q96C03 454 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 FAXDC2Q96IV6 333 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 FMNL2Q96PY5 1086 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 BAG1Q99933 345 aaPredicted RBP15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 CDC23Q9UJX2 597 aa15.28■□□□□ 0.04
SPTSSB-201ENST00000359175 RNF40O75150 1001 aa15.27■□□□□ 0.04
SPTSSB-201ENST00000359175 ME1P48163 572 aa15.27■□□□□ 0.04
SPTSSB-201ENST00000359175 ADALQ6DHV7 355 aa15.27■□□□□ 0.04
SPTSSB-201ENST00000359175 PPP1R42Q7Z4L9 355 aa15.27■□□□□ 0.04
SPTSSB-201ENST00000359175 JMYQ8N9B5 988 aa15.27■□□□□ 0.04
SPTSSB-201ENST00000359175 RBM28Q9NW13 759 aaKnown RBP15.27■□□□□ 0.04
SPTSSB-201ENST00000359175 NPATQ14207 1427 aa15.27■□□□□ 0.04
SPTSSB-201ENST00000359175 ATP1A3P13637 1013 aa15.27■□□□□ 0.03
SPTSSB-201ENST00000359175 SETQ01105 290 aaPredicted RBP15.27■□□□□ 0.03
SPTSSB-201ENST00000359175 PRPF38AQ8NAV1 312 aaKnown RBP15.27■□□□□ 0.03
SPTSSB-201ENST00000359175 CTCFLQ8NI51 663 aaPredicted RBP15.27■□□□□ 0.03
SPTSSB-201ENST00000359175 SMARCC2Q8TAQ2 1214 aa15.27■□□□□ 0.03
SPTSSB-201ENST00000359175 DPF2Q92785 391 aa15.27■□□□□ 0.03
SPTSSB-201ENST00000359175 CLIC6Q96NY7 704 aa15.27■□□□□ 0.03
SPTSSB-201ENST00000359175 STK31Q9BXU1 1019 aa15.27■□□□□ 0.03
SPTSSB-201ENST00000359175 ZSWIM4Q9H7M6 989 aa15.27■□□□□ 0.03
SPTSSB-201ENST00000359175 FAM169AQ9Y6X4 670 aa15.27■□□□□ 0.03
SPTSSB-201ENST00000359175 MYO1BO43795 1136 aa15.26■□□□□ 0.03
SPTSSB-201ENST00000359175 GBP6Q6ZN66 633 aa15.26■□□□□ 0.03
SPTSSB-201ENST00000359175 LRRIQ3A6PVS8 624 aaPredicted RBP15.26■□□□□ 0.03
SPTSSB-201ENST00000359175 SYF2O95926 243 aaKnown RBP15.26■□□□□ 0.03
SPTSSB-201ENST00000359175 EVI5LQ96CN4 794 aa15.26■□□□□ 0.03
SPTSSB-201ENST00000359175 EBAG9O00559 213 aa15.26■□□□□ 0.03
SPTSSB-201ENST00000359175 VSNL1P62760 191 aa15.26■□□□□ 0.03
SPTSSB-201ENST00000359175 TBX2Q13207 712 aaPredicted RBP15.26■□□□□ 0.03
SPTSSB-201ENST00000359175 CPLX2Q6PUV4 134 aaKnown RBP15.26■□□□□ 0.03
SPTSSB-201ENST00000359175 TOGARAM2Q6ZUX3 1019 aa15.26■□□□□ 0.03
SPTSSB-201ENST00000359175 PCDHA7Q9UN72 937 aa15.26■□□□□ 0.03
SPTSSB-201ENST00000359175 SERPINC1P01008 464 aa15.25■□□□□ 0.03
SPTSSB-201ENST00000359175 GPTP24298 496 aa15.25■□□□□ 0.03
SPTSSB-201ENST00000359175 GOLGA8FQ08AF8 430 aa15.25■□□□□ 0.03
SPTSSB-201ENST00000359175 GOLGA8DPQ0D2H9 430 aa15.25■□□□□ 0.03
SPTSSB-201ENST00000359175 CFAP100Q494V2 611 aa15.25■□□□□ 0.03
SPTSSB-201ENST00000359175 LLPHQ9BRT6 129 aaKnown RBP15.25■□□□□ 0.03
SPTSSB-201ENST00000359175 CDK19Q9BWU1 502 aa15.25■□□□□ 0.03
SPTSSB-201ENST00000359175 HMG20BQ9P0W2 317 aa15.25■□□□□ 0.03
SPTSSB-201ENST00000359175 PUF60Q9UHX1 559 aaKnown RBP15.25■□□□□ 0.03
SPTSSB-201ENST00000359175 HIP1O00291 1037 aa15.25■□□□□ 0.03
SPTSSB-201ENST00000359175 HSP90AB4PQ58FF6 505 aa15.25■□□□□ 0.03
SPTSSB-201ENST00000359175 GIMAP7Q8NHV1 300 aa15.25■□□□□ 0.03
SPTSSB-201ENST00000359175 SLC3A2P08195 630 aaKnown RBP15.24■□□□□ 0.03
SPTSSB-201ENST00000359175 NDUFA8P51970 172 aa15.24■□□□□ 0.03
SPTSSB-201ENST00000359175 SCRN1Q12765 414 aa15.24■□□□□ 0.03
SPTSSB-201ENST00000359175 MCM8Q9UJA3 840 aa15.24■□□□□ 0.03
SPTSSB-201ENST00000359175 FAM208AQ9UK61 1670 aaKnown RBP15.24■□□□□ 0.03
SPTSSB-201ENST00000359175 A0A1B0GVL5 298 aa15.24■□□□□ 0.03
SPTSSB-201ENST00000359175 CALRP27797 417 aaKnown RBP15.24■□□□□ 0.03
SPTSSB-201ENST00000359175 ELF1P32519 619 aa15.24■□□□□ 0.03
SPTSSB-201ENST00000359175 JPH2Q9BR39 696 aaPredicted RBP15.24■□□□□ 0.03
SPTSSB-201ENST00000359175 CDHR2Q9BYE9 1310 aa15.24■□□□□ 0.03
SPTSSB-201ENST00000359175 NEDD9Q14511 834 aa15.23■□□□□ 0.03
SPTSSB-201ENST00000359175 ISM2Q6H9L7 571 aa15.23■□□□□ 0.03
SPTSSB-201ENST00000359175 WDR93Q6P2C0 686 aa15.23■□□□□ 0.03
SPTSSB-201ENST00000359175 CABS1Q96KC9 395 aa15.23■□□□□ 0.03
SPTSSB-201ENST00000359175 NRKQ7Z2Y5 1582 aa15.23■□□□□ 0.03
SPTSSB-201ENST00000359175 CACNA1FO60840 1977 aa15.23■□□□□ 0.03
SPTSSB-201ENST00000359175 INPP5BP32019 993 aa15.23■□□□□ 0.03
SPTSSB-201ENST00000359175 ECHDC1Q9NTX5 307 aa15.23■□□□□ 0.03
SPTSSB-201ENST00000359175 CCT5P48643 541 aa15.23■□□□□ 0.03
SPTSSB-201ENST00000359175 ATXN2Q99700 1313 aaKnown RBP15.23■□□□□ 0.03
SPTSSB-201ENST00000359175 BIN1O00499 593 aa15.22■□□□□ 0.03
SPTSSB-201ENST00000359175 INHBEP58166 350 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms