RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 TMEM63CQ9P1W3 806 aa17.65■□□□□ 0.42
GABPB1-202ENST00000359031 RBM27Q9P2N5 1060 aaKnown RBP17.65■□□□□ 0.42
GABPB1-202ENST00000359031 NIP7Q9Y221 180 aaKnown RBP eCLIP17.65■□□□□ 0.42
GABPB1-202ENST00000359031 CNTNAP4Q9C0A0 1308 aa17.64■□□□□ 0.42
GABPB1-202ENST00000359031 COL24A1Q17RW2 1714 aa17.64■□□□□ 0.41
GABPB1-202ENST00000359031 SBF2Q86WG5 1849 aa17.64■□□□□ 0.41
GABPB1-202ENST00000359031 MYO5AQ9Y4I1 1855 aaKnown RBP17.64■□□□□ 0.41
GABPB1-202ENST00000359031 VPS37CA5D8V6 355 aaPredicted RBP17.64■□□□□ 0.41
GABPB1-202ENST00000359031 E7EWF7 191 aa17.64■□□□□ 0.41
GABPB1-202ENST00000359031 HCLS1P14317 486 aaPredicted RBP17.64■□□□□ 0.41
GABPB1-202ENST00000359031 LARP1BQ659C4 914 aaKnown RBP17.64■□□□□ 0.41
GABPB1-202ENST00000359031 CLEC4GQ6UXB4 293 aa17.64■□□□□ 0.41
GABPB1-202ENST00000359031 ZNF784Q8NCA9 323 aaPredicted RBP17.64■□□□□ 0.41
GABPB1-202ENST00000359031 AGXT2Q9BYV1 514 aa17.64■□□□□ 0.41
GABPB1-202ENST00000359031 CNPY2Q9Y2B0 182 aa17.64■□□□□ 0.41
GABPB1-202ENST00000359031 ADD2P35612 726 aa17.63■□□□□ 0.41
GABPB1-202ENST00000359031 FGD1P98174 961 aa17.63■□□□□ 0.41
GABPB1-202ENST00000359031 EXOSC10Q01780 885 aaKnown RBP17.63■□□□□ 0.41
GABPB1-202ENST00000359031 CCDC102BQ68D86 513 aa17.63■□□□□ 0.41
GABPB1-202ENST00000359031 MPHOSPH8Q99549 860 aa17.63■□□□□ 0.41
GABPB1-202ENST00000359031 LLPHQ9BRT6 129 aaKnown RBP17.63■□□□□ 0.41
GABPB1-202ENST00000359031 NSFL1CQ9UNZ2 370 aaKnown RBP17.63■□□□□ 0.41
GABPB1-202ENST00000359031 PHF14O94880 888 aa17.62■□□□□ 0.41
GABPB1-202ENST00000359031 UBE2HP62256 183 aa17.62■□□□□ 0.41
GABPB1-202ENST00000359031 UBE3CQ15386 1083 aa17.62■□□□□ 0.41
GABPB1-202ENST00000359031 TXNRD1Q16881 649 aa17.62■□□□□ 0.41
GABPB1-202ENST00000359031 IMMTQ16891 758 aaKnown RBP17.62■□□□□ 0.41
GABPB1-202ENST00000359031 LRSAM1Q6UWE0 723 aa17.62■□□□□ 0.41
GABPB1-202ENST00000359031 PI16Q6UXB8 463 aa17.62■□□□□ 0.41
GABPB1-202ENST00000359031 FBXL16Q8N461 479 aa17.62■□□□□ 0.41
GABPB1-202ENST00000359031 BRF1Q92994 677 aa17.62■□□□□ 0.41
GABPB1-202ENST00000359031 CHMP4CQ96CF2 233 aa17.62■□□□□ 0.41
GABPB1-202ENST00000359031 PFKFB2O60825 505 aa17.61■□□□□ 0.41
GABPB1-202ENST00000359031 IGHMBP2P38935 993 aaKnown RBP17.61■□□□□ 0.41
GABPB1-202ENST00000359031 PTGER2P43116 358 aa17.61■□□□□ 0.41
GABPB1-202ENST00000359031 NASPP49321 788 aaPredicted RBP17.61■□□□□ 0.41
GABPB1-202ENST00000359031 FOXD4L6Q3SYB3 417 aaPredicted RBP17.61■□□□□ 0.41
GABPB1-202ENST00000359031 FOXD4L3Q6VB84 417 aaPredicted RBP17.61■□□□□ 0.41
GABPB1-202ENST00000359031 LINC00116Q8NCU8 138 aa17.61■□□□□ 0.41
GABPB1-202ENST00000359031 FHDC1Q9C0D6 1143 aaPredicted RBP17.61■□□□□ 0.41
GABPB1-202ENST00000359031 GDPD2Q9HCC8 539 aa17.61■□□□□ 0.41
GABPB1-202ENST00000359031 MYH15Q9Y2K3 1946 aa17.61■□□□□ 0.41
GABPB1-202ENST00000359031 FOXP2O15409 715 aa17.61■□□□□ 0.41
GABPB1-202ENST00000359031 GPAA1O43292 621 aa17.61■□□□□ 0.41
GABPB1-202ENST00000359031 PHKA1P46020 1223 aa17.61■□□□□ 0.41
GABPB1-202ENST00000359031 STK3Q13188 491 aa17.61■□□□□ 0.41
GABPB1-202ENST00000359031 PROM2Q8N271 834 aa17.61■□□□□ 0.41
GABPB1-202ENST00000359031 LY75O60449 1722 aa17.6■□□□□ 0.41
GABPB1-202ENST00000359031 GADD45BO75293 160 aaPredicted RBP17.6■□□□□ 0.41
GABPB1-202ENST00000359031 SLC15A2Q16348 729 aa17.6■□□□□ 0.41
GABPB1-202ENST00000359031 CDC37L1Q7L3B6 337 aa17.6■□□□□ 0.41
GABPB1-202ENST00000359031 SMARCC2Q8TAQ2 1214 aa17.6■□□□□ 0.41
GABPB1-202ENST00000359031 PUS7LQ9H0K6 701 aaKnown RBP17.6■□□□□ 0.41
GABPB1-202ENST00000359031 PIH1D3Q9NQM4 214 aaKnown RBP17.6■□□□□ 0.41
GABPB1-202ENST00000359031 WDR19Q8NEZ3 1342 aa17.59■□□□□ 0.41
GABPB1-202ENST00000359031 FAM177BA6PVY3 158 aa17.59■□□□□ 0.41
GABPB1-202ENST00000359031 FIBPO43427 364 aa17.59■□□□□ 0.41
GABPB1-202ENST00000359031 KLHL34Q8N239 644 aa17.59■□□□□ 0.41
GABPB1-202ENST00000359031 FAM43AQ8N2R8 423 aa17.59■□□□□ 0.41
GABPB1-202ENST00000359031 CDC5LQ99459 802 aaKnown RBP17.59■□□□□ 0.41
GABPB1-202ENST00000359031 SYT17Q9BSW7 474 aa17.59■□□□□ 0.41
GABPB1-202ENST00000359031 MTFR1LQ9H019 292 aa17.59■□□□□ 0.41
GABPB1-202ENST00000359031 SEC31BQ9NQW1 1179 aa17.59■□□□□ 0.41
GABPB1-202ENST00000359031 TAF1LQ8IZX4 1826 aa17.58■□□□□ 0.41
GABPB1-202ENST00000359031 SYCE3A1L190 88 aa17.58■□□□□ 0.41
GABPB1-202ENST00000359031 KRT85P78386 507 aa17.58■□□□□ 0.41
GABPB1-202ENST00000359031 HMGN5P82970 282 aaKnown RBP17.58■□□□□ 0.41
GABPB1-202ENST00000359031 DNM1Q05193 864 aaKnown RBP17.58■□□□□ 0.41
GABPB1-202ENST00000359031 SCRN1Q12765 414 aa17.58■□□□□ 0.41
GABPB1-202ENST00000359031 SLC9C2Q5TAH2 1124 aa17.58■□□□□ 0.41
GABPB1-202ENST00000359031 TTLL5Q6EMB2 1281 aa17.58■□□□□ 0.41
GABPB1-202ENST00000359031 ANP32BQ92688 251 aaKnown RBP17.58■□□□□ 0.41
GABPB1-202ENST00000359031 ZNF274Q96GC6 653 aaPredicted RBP17.58■□□□□ 0.41
GABPB1-202ENST00000359031 KIF3AQ9Y496 699 aa17.58■□□□□ 0.41
GABPB1-202ENST00000359031 ZMYM6O95789 1325 aa17.58■□□□□ 0.4
GABPB1-202ENST00000359031 A0A0G2JLW4 131 aa17.58■□□□□ 0.4
GABPB1-202ENST00000359031 FGAP02671 866 aa17.58■□□□□ 0.4
GABPB1-202ENST00000359031 PDE6AP16499 860 aa17.58■□□□□ 0.4
GABPB1-202ENST00000359031 CCDC173Q0VFZ6 552 aa17.58■□□□□ 0.4
GABPB1-202ENST00000359031 CCDC183Q5T5S1 534 aa17.58■□□□□ 0.4
GABPB1-202ENST00000359031 RC3H1Q5TC82 1133 aaKnown RBP17.58■□□□□ 0.4
GABPB1-202ENST00000359031 SPATA5Q8NB90 893 aa17.58■□□□□ 0.4
GABPB1-202ENST00000359031 LRRC2Q9BYS8 371 aa17.58■□□□□ 0.4
GABPB1-202ENST00000359031 TIAM2Q8IVF5 1701 aa17.57■□□□□ 0.4
GABPB1-202ENST00000359031 CHD4Q14839 1912 aa17.57■□□□□ 0.4
GABPB1-202ENST00000359031 ELP1O95163 1332 aa17.57■□□□□ 0.4
GABPB1-202ENST00000359031 JAK2O60674 1132 aa17.57■□□□□ 0.4
GABPB1-202ENST00000359031 IDH1O75874 414 aaKnown RBP17.57■□□□□ 0.4
GABPB1-202ENST00000359031 EVCP57679 992 aa17.57■□□□□ 0.4
GABPB1-202ENST00000359031 HELBQ8NG08 1087 aaPredicted RBP17.57■□□□□ 0.4
GABPB1-202ENST00000359031 ZNF532Q9HCE3 1301 aa17.56■□□□□ 0.4
GABPB1-202ENST00000359031 TCRBV5S4A2TA0A5A2 114 aa17.56■□□□□ 0.4
GABPB1-202ENST00000359031 ZNF213O14771 459 aa17.56■□□□□ 0.4
GABPB1-202ENST00000359031 LETM1O95202 739 aaPredicted RBP17.56■□□□□ 0.4
GABPB1-202ENST00000359031 APOBRQ0VD83 1088 aa17.56■□□□□ 0.4
GABPB1-202ENST00000359031 SF3B3Q15393 1217 aaKnown RBP17.56■□□□□ 0.4
GABPB1-202ENST00000359031 MB21D2Q8IYB1 491 aaPredicted RBP17.56■□□□□ 0.4
GABPB1-202ENST00000359031 NCOA7Q8NI08 942 aa17.56■□□□□ 0.4
GABPB1-202ENST00000359031 COL4A1P02462 1669 aa17.55■□□□□ 0.4
GABPB1-202ENST00000359031 MCM5P33992 734 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms