RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 USP44Q9H0E7 712 aa15.63■□□□□ 0.09
VCP-201ENST00000358901 CLSTN2Q9H4D0 955 aa15.63■□□□□ 0.09
VCP-201ENST00000358901 CTAGE9A4FU28 777 aa15.62■□□□□ 0.09
VCP-201ENST00000358901 EYA2O00167 538 aa15.62■□□□□ 0.09
VCP-201ENST00000358901 JAK2O60674 1132 aa15.62■□□□□ 0.09
VCP-201ENST00000358901 TSPY3P0CV98 308 aa15.62■□□□□ 0.09
VCP-201ENST00000358901 TSPY8P0CW00 308 aa15.62■□□□□ 0.09
VCP-201ENST00000358901 MAP2K1Q02750 393 aaPredicted RBP15.62■□□□□ 0.09
VCP-201ENST00000358901 KRI1Q8N9T8 703 aaKnown RBP15.62■□□□□ 0.09
VCP-201ENST00000358901 SUCLG2Q96I99 432 aa15.62■□□□□ 0.09
VCP-201ENST00000358901 BABAM1Q9NWV8 329 aa15.62■□□□□ 0.09
VCP-201ENST00000358901 IRS4O14654 1257 aaPredicted RBP15.62■□□□□ 0.09
VCP-201ENST00000358901 TNIP1Q15025 636 aa15.62■□□□□ 0.09
VCP-201ENST00000358901 CUL5Q93034 780 aa15.62■□□□□ 0.09
VCP-201ENST00000358901 HELLSQ9NRZ9 838 aa15.62■□□□□ 0.09
VCP-201ENST00000358901 PUF60Q9UHX1 559 aaKnown RBP15.62■□□□□ 0.09
VCP-201ENST00000358901 GOLGA1Q92805 767 aa15.62■□□□□ 0.09
VCP-201ENST00000358901 NBPF6Q5VWK0 638 aa15.61■□□□□ 0.09
VCP-201ENST00000358901 NBPF5PQ86XG9 351 aaPredicted RBP15.61■□□□□ 0.09
VCP-201ENST00000358901 NBPF4Q96M43 638 aa15.61■□□□□ 0.09
VCP-201ENST00000358901 MMRN2Q9H8L6 949 aa15.61■□□□□ 0.09
VCP-201ENST00000358901 NIP7Q9Y221 180 aaKnown RBP eCLIP15.61■□□□□ 0.09
VCP-201ENST00000358901 POTEJP0CG39 1038 aa15.61■□□□□ 0.09
VCP-201ENST00000358901 CKAP4Q07065 602 aaKnown RBP15.61■□□□□ 0.09
VCP-201ENST00000358901 CTNNBL1Q8WYA6 563 aaPredicted RBP15.61■□□□□ 0.09
VCP-201ENST00000358901 EDC3Q96F86 508 aaKnown RBP15.61■□□□□ 0.09
VCP-201ENST00000358901 B4E1Z4 1266 aa15.61■□□□□ 0.09
VCP-201ENST00000358901 PHACTR2O75167 634 aa15.61■□□□□ 0.09
VCP-201ENST00000358901 GNAQP50148 359 aa15.61■□□□□ 0.09
VCP-201ENST00000358901 METTL22Q9BUU2 404 aaPredicted RBP15.61■□□□□ 0.09
VCP-201ENST00000358901 GUCA1BQ9UMX6 200 aa15.61■□□□□ 0.09
VCP-201ENST00000358901 SBNO1A3KN83 1393 aa15.61■□□□□ 0.09
VCP-201ENST00000358901 ZNF569Q5MCW4 686 aa15.61■□□□□ 0.09
VCP-201ENST00000358901 ZNF75DP51815 510 aa15.6■□□□□ 0.09
VCP-201ENST00000358901 CETN1Q12798 172 aa15.6■□□□□ 0.09
VCP-201ENST00000358901 U2AF2P26368 475 aaKnown RBP eCLIP15.6■□□□□ 0.092e-9■□□□□ 11.2
VCP-201ENST00000358901 ANO1Q5XXA6 986 aa15.6■□□□□ 0.09
VCP-201ENST00000358901 CEP112Q8N8E3 955 aa15.6■□□□□ 0.09
VCP-201ENST00000358901 KBTBD3Q8NAB2 608 aa15.6■□□□□ 0.09
VCP-201ENST00000358901 ELP1O95163 1332 aa15.6■□□□□ 0.09
VCP-201ENST00000358901 ZRSR2Q15696 482 aaKnown RBP15.6■□□□□ 0.09
VCP-201ENST00000358901 ZNF594Q96JF6 807 aaPredicted RBP15.6■□□□□ 0.09
VCP-201ENST00000358901 LLPHQ9BRT6 129 aaKnown RBP15.6■□□□□ 0.09
VCP-201ENST00000358901 MAGEB6P1A0A0J9YX57 407 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 GBP2P32456 591 aaPredicted RBP15.59■□□□□ 0.09
VCP-201ENST00000358901 KIF5AQ12840 1032 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.59■□□□□ 0.09
VCP-201ENST00000358901 DZIP3Q86Y13 1208 aaKnown RBP15.59■□□□□ 0.09
VCP-201ENST00000358901 FEZ1Q99689 392 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 BAG1Q99933 345 aaPredicted RBP15.59■□□□□ 0.09
VCP-201ENST00000358901 CABP5Q9NP86 173 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 PODXL2Q9NZ53 605 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 MBD4O95243 580 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 ME3Q16798 604 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 IQUBQ8NA54 791 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 SIRT1Q96EB6 747 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 ACSBG1Q96GR2 724 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 CCDC42Q96M95 316 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 ZNF219Q9P2Y4 722 aaPredicted RBP15.59■□□□□ 0.09
VCP-201ENST00000358901 TBX22Q9Y458 520 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 RHOXF2BP0C7M4 288 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 NAPAP54920 295 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 MYRIPQ8NFW9 859 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 RHOXF2Q9BQY4 288 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 KRT86O43790 486 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 GNAT2P19087 354 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 CALML3P27482 149 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 MCM7P33993 719 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 PAF1Q8N7H5 531 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 SSH3Q8TE77 659 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 NGLY1Q96IV0 654 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 NLRP3Q96P20 1036 aa15.59■□□□□ 0.09
VCP-201ENST00000358901 MAST1Q9Y2H9 1570 aa15.58■□□□□ 0.09
VCP-201ENST00000358901 TACC1O75410 805 aa15.58■□□□□ 0.09
VCP-201ENST00000358901 CD2BP2O95400 341 aaKnown RBP15.58■□□□□ 0.09
VCP-201ENST00000358901 CAPN2P17655 700 aa15.58■□□□□ 0.09
VCP-201ENST00000358901 UBXN1Q04323 297 aa15.58■□□□□ 0.09
VCP-201ENST00000358901 MICALCLQ6ZW33 695 aa15.58■□□□□ 0.09
VCP-201ENST00000358901 GTF3C6Q969F1 213 aa15.58■□□□□ 0.09
VCP-201ENST00000358901 TM6SF1Q9BZW5 370 aa15.58■□□□□ 0.09
VCP-201ENST00000358901 LRRC27Q9C0I9 530 aa15.58■□□□□ 0.09
VCP-201ENST00000358901 ATP6V1AP38606 617 aa15.58■□□□□ 0.08
VCP-201ENST00000358901 TSC1Q92574 1164 aa15.58■□□□□ 0.08
VCP-201ENST00000358901 ERO1AQ96HE7 468 aa15.58■□□□□ 0.08
VCP-201ENST00000358901 PLIN2Q99541 437 aa15.58■□□□□ 0.08
VCP-201ENST00000358901 RSPH14Q9UHP6 348 aa15.58■□□□□ 0.08
VCP-201ENST00000358901 KIAA0232Q92628 1395 aa15.58■□□□□ 0.08
VCP-201ENST00000358901 IL2RBP14784 551 aa15.58■□□□□ 0.08
VCP-201ENST00000358901 KRT2P35908 639 aa15.58■□□□□ 0.08
VCP-201ENST00000358901 EVCP57679 992 aa15.58■□□□□ 0.08
VCP-201ENST00000358901 ARID5AQ03989 594 aa15.58■□□□□ 0.08
VCP-201ENST00000358901 GCKRQ14397 625 aa15.58■□□□□ 0.08
VCP-201ENST00000358901 CAPZA3Q96KX2 299 aa15.58■□□□□ 0.08
VCP-201ENST00000358901 VWA3AA6NCI4 1184 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 PLBD2Q8NHP8 589 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 MCM9Q9NXL9 1143 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 OGFRQ9NZT2 677 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 KCNH3Q9ULD8 1083 aa15.57■□□□□ 0.08
VCP-201ENST00000358901 ANGEL1Q9UNK9 670 aaKnown RBP15.57■□□□□ 0.08
VCP-201ENST00000358901 LUC7L2Q9Y383 392 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms