RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 ACTN4O43707 911 aaKnown RBP14.47□□□□□ -0.09
SMC4-202ENST00000357388 NUCB1Q02818 461 aa14.47□□□□□ -0.09
SMC4-202ENST00000357388 PPP1R7Q15435 360 aa14.47□□□□□ -0.09
SMC4-202ENST00000357388 ZNF365Q70YC5 407 aa14.47□□□□□ -0.09
SMC4-202ENST00000357388 KRT28Q7Z3Y7 464 aa14.47□□□□□ -0.09
SMC4-202ENST00000357388 C16orf71Q8IYS4 520 aaPredicted RBP14.47□□□□□ -0.09
SMC4-202ENST00000357388 CAPZA3Q96KX2 299 aa14.47□□□□□ -0.09
SMC4-202ENST00000357388 ZBTB3Q9H5J0 574 aa14.47□□□□□ -0.09
SMC4-202ENST00000357388 IL16Q14005 1332 aa14.46□□□□□ -0.09
SMC4-202ENST00000357388 INTS4Q96HW7 963 aaKnown RBP14.46□□□□□ -0.09
SMC4-202ENST00000357388 VAT1LQ9HCJ6 419 aa14.46□□□□□ -0.09
SMC4-202ENST00000357388 AMOTL2Q9Y2J4 779 aa14.46□□□□□ -0.09
SMC4-202ENST00000357388 ZBTB17Q13105 803 aa14.46□□□□□ -0.09
SMC4-202ENST00000357388 PPFIA1Q13136 1202 aa14.46□□□□□ -0.09
SMC4-202ENST00000357388 CNNM2Q9H8M5 875 aa14.46□□□□□ -0.09
SMC4-202ENST00000357388 CCDC141Q6ZP82 1450 aa14.46□□□□□ -0.09
SMC4-202ENST00000357388 TLDC2A0PJX2 215 aa14.46□□□□□ -0.09
SMC4-202ENST00000357388 MRPS9P82933 396 aaKnown RBP14.46□□□□□ -0.09
SMC4-202ENST00000357388 IFT20Q8IY31 132 aa14.46□□□□□ -0.09
SMC4-202ENST00000357388 CLEC11AQ9Y240 323 aa14.46□□□□□ -0.09
SMC4-202ENST00000357388 CCDC62Q6P9F0 684 aa14.46□□□□□ -0.1
SMC4-202ENST00000357388 BAG1Q99933 345 aaPredicted RBP14.46□□□□□ -0.1
SMC4-202ENST00000357388 PPP1R12CQ9BZL4 782 aa14.46□□□□□ -0.1
SMC4-202ENST00000357388 AKR1B15C9JRZ8 316 aaPredicted RBP14.45□□□□□ -0.1
SMC4-202ENST00000357388 ATP6V1AP38606 617 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 VWA3BQ502W6 1294 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 C20orf194Q5TEA3 1177 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 VPS52Q8N1B4 723 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 RNF10Q8N5U6 811 aaKnown RBP14.45□□□□□ -0.1
SMC4-202ENST00000357388 MCUR1Q96AQ8 359 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 PLCB1Q9NQ66 1216 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 RASSF2P50749 326 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 MTMR3Q13615 1198 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 AP1ARQ63HQ0 302 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 ODF2LQ9ULJ1 636 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 GKAP1Q5VSY0 366 aaPredicted RBP14.45□□□□□ -0.1
SMC4-202ENST00000357388 PLCD3Q8N3E9 789 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 ALG1Q9BT22 464 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 IMPG2Q9BZV3 1241 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 MMRN2Q9H8L6 949 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 ATP6V0A2Q9Y487 856 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 MAP3K21Q5TCX8 1036 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 PSMD1Q99460 953 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 FAM169AQ9Y6X4 670 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 SPTLC2O15270 562 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 PPFIA3O75145 1194 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 KARSQ15046 597 aaKnown RBP14.45□□□□□ -0.1
SMC4-202ENST00000357388 AFAP1L2Q8N4X5 818 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 GBP5Q96PP8 586 aa14.45□□□□□ -0.1
SMC4-202ENST00000357388 TOM1O60784 492 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 LUC7L3O95232 432 aaKnown RBP14.44□□□□□ -0.1
SMC4-202ENST00000357388 SNRPA1P09661 255 aaKnown RBP14.44□□□□□ -0.1
SMC4-202ENST00000357388 U2AF2P26368 475 aaKnown RBP eCLIP14.44□□□□□ -0.16e-7■■■■■ 34.1
SMC4-202ENST00000357388 UBXN1Q04323 297 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 BRAPQ7Z569 592 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 ARHGAP45Q92619 1136 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 VCX3AQ9NNX9 186 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 LZTFL1Q9NQ48 299 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 NCAPD3P42695 1498 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 TRIM27P14373 513 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 POLD1P28340 1107 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 SLC8A1P32418 973 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 RAB3IPQ96QF0 476 aaPredicted RBP14.44□□□□□ -0.1
SMC4-202ENST00000357388 IMPACTQ9P2X3 320 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 ARL1P40616 181 aaPredicted RBP14.44□□□□□ -0.1
SMC4-202ENST00000357388 AFMP43652 599 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 USHBP1Q8N6Y0 703 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 CABS1Q96KC9 395 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 SNX16P57768 344 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 C8orf74Q6P047 294 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 RAB11FIP4Q86YS3 637 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 IFNKQ9P0W0 207 aa14.44□□□□□ -0.1
SMC4-202ENST00000357388 WASLO00401 505 aaPredicted RBP14.43□□□□□ -0.1
SMC4-202ENST00000357388 ZBTB43O43298 467 aa14.43□□□□□ -0.1
SMC4-202ENST00000357388 CCDC122Q5T0U0 273 aa14.43□□□□□ -0.1
SMC4-202ENST00000357388 WAPLQ7Z5K2 1190 aa14.43□□□□□ -0.1
SMC4-202ENST00000357388 MICU3Q86XE3 530 aa14.43□□□□□ -0.1
SMC4-202ENST00000357388 ZNF354CQ86Y25 554 aa14.43□□□□□ -0.1
SMC4-202ENST00000357388 TSPY3P0CV98 308 aa14.43□□□□□ -0.1
SMC4-202ENST00000357388 TSPY8P0CW00 308 aa14.43□□□□□ -0.1
SMC4-202ENST00000357388 ASIC1P78348 528 aa14.43□□□□□ -0.1
SMC4-202ENST00000357388 CCDC184Q52MB2 194 aa14.43□□□□□ -0.1
SMC4-202ENST00000357388 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.43□□□□□ -0.15e-47■■■■■ 274.1
SMC4-202ENST00000357388 KLF18A0A0U1RQI7 1052 aa14.43□□□□□ -0.1
SMC4-202ENST00000357388 LMOD1P29536 600 aaPredicted RBP14.43□□□□□ -0.1
SMC4-202ENST00000357388 MYL5Q02045 173 aa14.43□□□□□ -0.1
SMC4-202ENST00000357388 SETDB2Q96T68 719 aa14.43□□□□□ -0.1
SMC4-202ENST00000357388 FLIIQ13045 1269 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 VSIG1Q86XK7 387 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 TSKSQ9UJT2 592 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 FAN1Q9Y2M0 1017 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 MRVI1Q9Y6F6 885 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 HECW1Q76N89 1606 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 SMIM23A6NLE4 172 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 WTAPQ15007 396 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 INF2Q27J81 1249 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 NBPF14Q5TI25 921 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 PHLDB3Q6NSJ2 640 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 SEPT14Q6ZU15 432 aa14.42□□□□□ -0.1
SMC4-202ENST00000357388 CCDC117Q8IWD4 279 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms