RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 RTL9Q8NET4 1388 aa15.04■□□□□ -0
RTFDC1-202ENST00000357348 PTMAP06454 111 aaKnown RBP15.04■□□□□ -0
RTFDC1-202ENST00000357348 HMGN5P82970 282 aaKnown RBP15.04■□□□□ -0
RTFDC1-202ENST00000357348 GORABQ5T7V8 394 aa15.04■□□□□ -0
RTFDC1-202ENST00000357348 ILDR2Q71H61 639 aa15.04■□□□□ -0
RTFDC1-202ENST00000357348 VGLL2Q8N8G2 317 aa15.04■□□□□ -0
RTFDC1-202ENST00000357348 EDC3Q96F86 508 aaKnown RBP15.04■□□□□ -0
RTFDC1-202ENST00000357348 XAGE2Q96GT9 111 aa15.04■□□□□ -0
RTFDC1-202ENST00000357348 FBXO3Q9UK99 471 aa15.04■□□□□ -0
RTFDC1-202ENST00000357348 ATF5Q9Y2D1 282 aaPredicted RBP15.04■□□□□ -0
RTFDC1-202ENST00000357348 UTRNP46939 3433 aa15.04■□□□□ -0
RTFDC1-202ENST00000357348 CACNA1SQ13698 1873 aa15.03■□□□□ -0
RTFDC1-202ENST00000357348 TTC41PQ6P2S7 1318 aa15.03■□□□□ -0
RTFDC1-202ENST00000357348 MROH5Q6ZUA9 1318 aa15.03■□□□□ -0
RTFDC1-202ENST00000357348 TTC14Q96N46 770 aa15.03■□□□□ -0
RTFDC1-202ENST00000357348 DNAJC2Q99543 621 aaKnown RBP15.03■□□□□ -0
RTFDC1-202ENST00000357348 BSDC1Q9NW68 430 aaPredicted RBP15.03■□□□□ -0
RTFDC1-202ENST00000357348 MINPP1Q9UNW1 487 aa15.03■□□□□ -0
RTFDC1-202ENST00000357348 AKAP2Q9Y2D5 859 aa15.03■□□□□ -0
RTFDC1-202ENST00000357348 LRP5O75197 1615 aa15.03■□□□□ -0
RTFDC1-202ENST00000357348 GLRX3O76003 335 aaKnown RBP15.02■□□□□ -0
RTFDC1-202ENST00000357348 NOLC1Q14978 699 aaKnown RBP eCLIP15.02■□□□□ -02e-9■■□□□ 13.8
RTFDC1-202ENST00000357348 FUCA2Q9BTY2 467 aa15.02■□□□□ -0
RTFDC1-202ENST00000357348 CCDC94Q9BW85 323 aaPredicted RBP15.02□□□□□ -0.01
RTFDC1-202ENST00000357348 BRIP1Q9BX63 1249 aa15.02□□□□□ -0.01
RTFDC1-202ENST00000357348 NRXN2Q9P2S2 1712 aa15.02□□□□□ -0.01
RTFDC1-202ENST00000357348 UBE2HP62256 183 aa15.01□□□□□ -0.01
RTFDC1-202ENST00000357348 GRAPQ13588 217 aa15.01□□□□□ -0.01
RTFDC1-202ENST00000357348 CRY2Q49AN0 593 aa15.01□□□□□ -0.01
RTFDC1-202ENST00000357348 GRAPLQ8TC17 118 aaPredicted RBP15.01□□□□□ -0.01
RTFDC1-202ENST00000357348 UPF3BQ9BZI7 483 aaKnown RBP15.01□□□□□ -0.01
RTFDC1-202ENST00000357348 IL25Q9H293 177 aa15.01□□□□□ -0.01
RTFDC1-202ENST00000357348 GDPD2Q9HCC8 539 aa15.01□□□□□ -0.01
RTFDC1-202ENST00000357348 GPR108Q9NPR9 543 aa15.01□□□□□ -0.01
RTFDC1-202ENST00000357348 SNRKQ9NRH2 765 aa15.01□□□□□ -0.01
RTFDC1-202ENST00000357348 RAD50Q92878 1312 aa15.01□□□□□ -0.01
RTFDC1-202ENST00000357348 ZSCAN22P10073 491 aaPredicted RBP15.01□□□□□ -0.01
RTFDC1-202ENST00000357348 PUM3Q15397 648 aaKnown RBP15.01□□□□□ -0.01
RTFDC1-202ENST00000357348 ZNF622Q969S3 477 aaKnown RBP eCLIP15.01□□□□□ -0.017e-9■□□□□ 9.4
RTFDC1-202ENST00000357348 RBM17Q96I25 401 aaKnown RBP15.01□□□□□ -0.01
RTFDC1-202ENST00000357348 ADCY5O95622 1261 aa15□□□□□ -0.01
RTFDC1-202ENST00000357348 CHRNA5P30532 468 aa15□□□□□ -0.01
RTFDC1-202ENST00000357348 TTC39AQ5SRH9 613 aa15□□□□□ -0.01
RTFDC1-202ENST00000357348 PI16Q6UXB8 463 aa15□□□□□ -0.01
RTFDC1-202ENST00000357348 USP25Q9UHP3 1055 aa15□□□□□ -0.01
RTFDC1-202ENST00000357348 WWC3Q9ULE0 1092 aa15□□□□□ -0.01
RTFDC1-202ENST00000357348 A0A1B0GUL6 1792 aa15□□□□□ -0.01
RTFDC1-202ENST00000357348 SGSM2O43147 1006 aa15□□□□□ -0.01
RTFDC1-202ENST00000357348 KDM4AO75164 1064 aa15□□□□□ -0.01
RTFDC1-202ENST00000357348 OLFM4Q6UX06 510 aa15□□□□□ -0.01
RTFDC1-202ENST00000357348 ANKIB1Q9P2G1 1089 aa15□□□□□ -0.01
RTFDC1-202ENST00000357348 COL11A2P13942 1736 aaPredicted RBP14.99□□□□□ -0.01
RTFDC1-202ENST00000357348 SRGNP10124 158 aa14.99□□□□□ -0.01
RTFDC1-202ENST00000357348 KLRK1P26718 216 aa14.99□□□□□ -0.01
RTFDC1-202ENST00000357348 FKBP4Q02790 459 aaKnown RBP eCLIP14.99□□□□□ -0.01
RTFDC1-202ENST00000357348 SCARF1Q14162 830 aa14.99□□□□□ -0.01
RTFDC1-202ENST00000357348 CCDC158Q5M9N0 1113 aa14.99□□□□□ -0.01
RTFDC1-202ENST00000357348 ZNF710Q8N1W2 664 aa14.99□□□□□ -0.01
RTFDC1-202ENST00000357348 LPIN2Q92539 896 aa14.99□□□□□ -0.01
RTFDC1-202ENST00000357348 ZNF219Q9P2Y4 722 aaPredicted RBP14.99□□□□□ -0.01
RTFDC1-202ENST00000357348 IQSEC3Q9UPP2 1182 aaPredicted RBP14.99□□□□□ -0.01
RTFDC1-202ENST00000357348 IFIT1P09914 478 aaKnown RBP14.98□□□□□ -0.01
RTFDC1-202ENST00000357348 ATP5JP18859 108 aa14.98□□□□□ -0.01
RTFDC1-202ENST00000357348 FGFR2P21802 821 aa14.98□□□□□ -0.01
RTFDC1-202ENST00000357348 PDE6BP35913 854 aa14.98□□□□□ -0.01
RTFDC1-202ENST00000357348 PHKA1P46020 1223 aa14.98□□□□□ -0.01
RTFDC1-202ENST00000357348 KCNJ4P48050 445 aa14.98□□□□□ -0.01
RTFDC1-202ENST00000357348 NOL8Q76FK4 1167 aaKnown RBP14.98□□□□□ -0.01
RTFDC1-202ENST00000357348 CNTROBQ8N137 903 aa14.98□□□□□ -0.01
RTFDC1-202ENST00000357348 GPR101Q96P66 508 aaPredicted RBP14.98□□□□□ -0.01
RTFDC1-202ENST00000357348 LSG1Q9H089 658 aaKnown RBP14.98□□□□□ -0.01
RTFDC1-202ENST00000357348 PPP1R1BQ9UD71 204 aaPredicted RBP14.98□□□□□ -0.01
RTFDC1-202ENST00000357348 CNPY2Q9Y2B0 182 aa14.98□□□□□ -0.01
RTFDC1-202ENST00000357348 SNX14Q9Y5W7 946 aa14.98□□□□□ -0.01
RTFDC1-202ENST00000357348 CHGBP05060 677 aa14.98□□□□□ -0.01
RTFDC1-202ENST00000357348 SLC5A1P13866 664 aa14.98□□□□□ -0.01
RTFDC1-202ENST00000357348 BCAMP50895 628 aa14.98□□□□□ -0.01
RTFDC1-202ENST00000357348 C2CD5Q86YS7 1000 aa14.98□□□□□ -0.01
RTFDC1-202ENST00000357348 GOLIM4O00461 696 aa14.97□□□□□ -0.01
RTFDC1-202ENST00000357348 STX6O43752 255 aa14.97□□□□□ -0.01
RTFDC1-202ENST00000357348 F13A1P00488 732 aa14.97□□□□□ -0.01
RTFDC1-202ENST00000357348 GYG1P46976 350 aa14.97□□□□□ -0.01
RTFDC1-202ENST00000357348 UTP14CQ5TAP6 766 aaKnown RBP14.97□□□□□ -0.01
RTFDC1-202ENST00000357348 CCDC102BQ68D86 513 aa14.97□□□□□ -0.01
RTFDC1-202ENST00000357348 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.97□□□□□ -0.01
RTFDC1-202ENST00000357348 KLRG2A4D1S0 409 aaPredicted RBP14.97□□□□□ -0.01
RTFDC1-202ENST00000357348 SYT1P21579 422 aa14.97□□□□□ -0.01
RTFDC1-202ENST00000357348 SLC16A10Q8TF71 515 aa14.97□□□□□ -0.01
RTFDC1-202ENST00000357348 LIMCH1Q9UPQ0 1083 aa14.97□□□□□ -0.01
RTFDC1-202ENST00000357348 ATP6V1DQ9Y5K8 247 aa14.97□□□□□ -0.01
RTFDC1-202ENST00000357348 TPM3P06753 285 aa14.96□□□□□ -0.01
RTFDC1-202ENST00000357348 RUFY3Q7L099 469 aa14.96□□□□□ -0.01
RTFDC1-202ENST00000357348 FSD1Q9BTV5 496 aa14.96□□□□□ -0.01
RTFDC1-202ENST00000357348 H0YIN7 160 aa14.96□□□□□ -0.02
RTFDC1-202ENST00000357348 HOXA10P31260 410 aaPredicted RBP14.96□□□□□ -0.02
RTFDC1-202ENST00000357348 MCAMP43121 646 aa14.96□□□□□ -0.02
RTFDC1-202ENST00000357348 AK2P54819 239 aa14.96□□□□□ -0.02
RTFDC1-202ENST00000357348 ZNF830Q96NB3 372 aaPredicted RBP14.96□□□□□ -0.02
RTFDC1-202ENST00000357348 TTC12Q9H892 705 aaPredicted RBP14.96□□□□□ -0.02
RTFDC1-202ENST00000357348 MYO5AQ9Y4I1 1855 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms