RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 FTOQ9C0B1 505 aaKnown RBP eCLIP16.55■□□□□ 0.246e-10■□□□□ 9.5
LSS-201ENST00000356396 AKAP2Q9Y2D5 859 aa16.55■□□□□ 0.24
LSS-201ENST00000356396 RIMBP2O15034 1052 aa16.55■□□□□ 0.24
LSS-201ENST00000356396 PUM3Q15397 648 aaKnown RBP16.55■□□□□ 0.24
LSS-201ENST00000356396 ZMYM1Q5SVZ6 1142 aa16.55■□□□□ 0.24
LSS-201ENST00000356396 LIMCH1Q9UPQ0 1083 aa16.55■□□□□ 0.24
LSS-201ENST00000356396 CIAO1O76071 339 aa16.54■□□□□ 0.24
LSS-201ENST00000356396 SYT1P21579 422 aa16.54■□□□□ 0.24
LSS-201ENST00000356396 NARFQ9UHQ1 456 aa16.54■□□□□ 0.24
LSS-201ENST00000356396 SMC3Q9UQE7 1217 aa16.54■□□□□ 0.24
LSS-201ENST00000356396 ZNF652Q9Y2D9 606 aa16.54■□□□□ 0.24
LSS-201ENST00000356396 SPATA31A6Q5VVP1 1343 aa16.54■□□□□ 0.24
LSS-201ENST00000356396 MINDY4BA8MYZ0 360 aa16.54■□□□□ 0.24
LSS-201ENST00000356396 E7EWF7 191 aa16.54■□□□□ 0.24
LSS-201ENST00000356396 PDE6AP16499 860 aa16.54■□□□□ 0.24
LSS-201ENST00000356396 PRDX5P30044 214 aa16.54■□□□□ 0.24
LSS-201ENST00000356396 LCORLQ8N3X6 602 aa16.54■□□□□ 0.24
LSS-201ENST00000356396 NLRP3Q96P20 1036 aa16.54■□□□□ 0.24
LSS-201ENST00000356396 PLA2G12BQ9BX93 195 aa16.54■□□□□ 0.24
LSS-201ENST00000356396 ZSWIM6Q9HCJ5 1215 aa16.54■□□□□ 0.24
LSS-201ENST00000356396 TACC3Q9Y6A5 838 aa16.54■□□□□ 0.24
LSS-201ENST00000356396 CDHR2Q9BYE9 1310 aa16.54■□□□□ 0.24
LSS-201ENST00000356396 F8W031 263 aaPredicted RBP16.53■□□□□ 0.24
LSS-201ENST00000356396 TXNRD1Q16881 649 aa16.53■□□□□ 0.24
LSS-201ENST00000356396 PIBF1Q8WXW3 757 aa16.53■□□□□ 0.24
LSS-201ENST00000356396 MXD3Q9BW11 206 aa16.53■□□□□ 0.24
LSS-201ENST00000356396 BAZ2BQ9UIF8 2168 aaKnown RBP16.53■□□□□ 0.24
LSS-201ENST00000356396 CDC37L1Q7L3B6 337 aa16.53■□□□□ 0.24
LSS-201ENST00000356396 B4E1Z4 1266 aa16.53■□□□□ 0.24
LSS-201ENST00000356396 DEFB132Q7Z7B7 95 aa16.53■□□□□ 0.24
LSS-201ENST00000356396 LPIN2Q92539 896 aa16.53■□□□□ 0.24
LSS-201ENST00000356396 SPEF2Q9C093 1822 aa16.52■□□□□ 0.24
LSS-201ENST00000356396 hCG_1642624A0A1W2PR95 340 aa16.52■□□□□ 0.24
LSS-201ENST00000356396 RPS6KB1P23443 525 aa16.52■□□□□ 0.24
LSS-201ENST00000356396 RPS8P62241 208 aaKnown RBP16.52■□□□□ 0.23
LSS-201ENST00000356396 EN1Q05925 392 aaPredicted RBP16.52■□□□□ 0.23
LSS-201ENST00000356396 TBC1D10CQ8IV04 446 aa16.52■□□□□ 0.23
LSS-201ENST00000356396 AIFM3Q96NN9 605 aa16.52■□□□□ 0.23
LSS-201ENST00000356396 BCL11BQ9C0K0 894 aaPredicted RBP16.52■□□□□ 0.23
LSS-201ENST00000356396 SLC5A1P13866 664 aa16.51■□□□□ 0.23
LSS-201ENST00000356396 DNM1Q05193 864 aaKnown RBP16.51■□□□□ 0.23
LSS-201ENST00000356396 AIDAQ96BJ3 306 aa16.51■□□□□ 0.23
LSS-201ENST00000356396 GYS1P13807 737 aa16.51■□□□□ 0.23
LSS-201ENST00000356396 DDR1Q08345 913 aa16.51■□□□□ 0.23
LSS-201ENST00000356396 DIXDC1Q155Q3 683 aa16.51■□□□□ 0.23
LSS-201ENST00000356396 POTEAQ6S8J7 498 aa16.51■□□□□ 0.23
LSS-201ENST00000356396 TPTE2Q6XPS3 522 aa16.51■□□□□ 0.23
LSS-201ENST00000356396 CNBD1Q8NA66 436 aa16.51■□□□□ 0.23
LSS-201ENST00000356396 GPT2Q8TD30 523 aa16.51■□□□□ 0.23
LSS-201ENST00000356396 FGFR2P21802 821 aa16.5■□□□□ 0.23
LSS-201ENST00000356396 TCHHQ07283 1943 aa16.5■□□□□ 0.23
LSS-201ENST00000356396 ANAPC15P60006 121 aa16.5■□□□□ 0.23
LSS-201ENST00000356396 PARP10Q53GL7 1025 aa16.5■□□□□ 0.23
LSS-201ENST00000356396 PRR5LQ6MZQ0 368 aa16.5■□□□□ 0.23
LSS-201ENST00000356396 RNF214Q8ND24 703 aa16.5■□□□□ 0.23
LSS-201ENST00000356396 ZNF384Q8TF68 577 aa16.5■□□□□ 0.23
LSS-201ENST00000356396 NBPF3Q9H094 633 aa16.5■□□□□ 0.23
LSS-201ENST00000356396 FAM84BQ96KN1 310 aaPredicted RBP16.5■□□□□ 0.23
LSS-201ENST00000356396 EPB41L4AQ9HCS5 686 aaPredicted RBP16.5■□□□□ 0.23
LSS-201ENST00000356396 AATFQ9NY61 560 aaKnown RBP eCLIP16.5■□□□□ 0.234e-6■□□□□ 10.1
LSS-201ENST00000356396 BTAF1O14981 1849 aa16.49■□□□□ 0.23
LSS-201ENST00000356396 CYP7A1P22680 504 aa16.49■□□□□ 0.23
LSS-201ENST00000356396 SCRN1Q12765 414 aa16.49■□□□□ 0.23
LSS-201ENST00000356396 RPAP1Q9BWH6 1393 aaPredicted RBP16.49■□□□□ 0.23
LSS-201ENST00000356396 SERPINB2P05120 415 aa16.49■□□□□ 0.23
LSS-201ENST00000356396 ADD2P35612 726 aa16.49■□□□□ 0.23
LSS-201ENST00000356396 GBP4Q96PP9 640 aa16.49■□□□□ 0.23
LSS-201ENST00000356396 A0A087WWV3 80 aa16.48■□□□□ 0.23
LSS-201ENST00000356396 RNF20Q5VTR2 975 aa16.48■□□□□ 0.23
LSS-201ENST00000356396 HIP1O00291 1037 aa16.48■□□□□ 0.23
LSS-201ENST00000356396 LARP1BQ659C4 914 aaKnown RBP16.48■□□□□ 0.23
LSS-201ENST00000356396 CYB5R4Q7L1T6 521 aa16.48■□□□□ 0.23
LSS-201ENST00000356396 CUL4AQ13619 759 aa16.47■□□□□ 0.23
LSS-201ENST00000356396 COL23A1Q86Y22 540 aaPredicted RBP16.47■□□□□ 0.23
LSS-201ENST00000356396 LMBRD1Q9NUN5 540 aa16.47■□□□□ 0.23
LSS-201ENST00000356396 CYP2D6P10635 497 aa16.47■□□□□ 0.23
LSS-201ENST00000356396 TM4SF1P30408 202 aa16.47■□□□□ 0.23
LSS-201ENST00000356396 MICU3Q86XE3 530 aa16.47■□□□□ 0.23
LSS-201ENST00000356396 APPBP2Q92624 585 aa16.47■□□□□ 0.23
LSS-201ENST00000356396 CDC5LQ99459 802 aaKnown RBP16.47■□□□□ 0.23
LSS-201ENST00000356396 KCNQ5Q9NR82 932 aa16.47■□□□□ 0.23
LSS-201ENST00000356396 SLC4A4Q9Y6R1 1079 aa16.47■□□□□ 0.23
LSS-201ENST00000356396 NEDD4P46934 1319 aa16.47■□□□□ 0.23
LSS-201ENST00000356396 STX6O43752 255 aa16.47■□□□□ 0.23
LSS-201ENST00000356396 EZH2Q15910 746 aaKnown RBP16.46■□□□□ 0.23
LSS-201ENST00000356396 USP48Q86UV5 1035 aa16.46■□□□□ 0.23
LSS-201ENST00000356396 PHKBQ93100 1093 aa16.46■□□□□ 0.23
LSS-201ENST00000356396 ANO8Q9HCE9 1232 aaPredicted RBP16.46■□□□□ 0.23
LSS-201ENST00000356396 GPR108Q9NPR9 543 aa16.46■□□□□ 0.23
LSS-201ENST00000356396 RGS17Q9UGC6 210 aaPredicted RBP16.46■□□□□ 0.23
LSS-201ENST00000356396 SCAF8Q9UPN6 1271 aaKnown RBP16.46■□□□□ 0.23
LSS-201ENST00000356396 ZNF213O14771 459 aa16.46■□□□□ 0.23
LSS-201ENST00000356396 NMT2O60551 498 aa16.46■□□□□ 0.23
LSS-201ENST00000356396 ADD1P35611 737 aaKnown RBP16.46■□□□□ 0.23
LSS-201ENST00000356396 MROH5Q6ZUA9 1318 aa16.45■□□□□ 0.22
LSS-201ENST00000356396 C6orf229H3BNL8 230 aa16.45■□□□□ 0.22
LSS-201ENST00000356396 TDO2P48775 406 aa16.45■□□□□ 0.22
LSS-201ENST00000356396 ANTXR2P58335 489 aa16.45■□□□□ 0.22
LSS-201ENST00000356396 ERCC4Q92889 916 aaPredicted RBP16.45■□□□□ 0.22
LSS-201ENST00000356396 PPP1R1BQ9UD71 204 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms