RNA–Protein interactions for RNA: ENST00000356100.6

PTPRT-201, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-201ENST00000356100 THUMPD2Q9BTF0 503 aaKnown RBP6.8□□□□□ -1.32
PTPRT-201ENST00000356100 ELP1O95163 1332 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 ADGRL2O95490 1459 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 FOXO3O43524 673 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 VAV2P52735 878 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 BRDTQ58F21 947 aaPredicted RBP6.8□□□□□ -1.32
PTPRT-201ENST00000356100 KIFAP3Q92845 792 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 CCDC42Q96M95 316 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 SMARCA5O60264 1052 aaPredicted RBP6.8□□□□□ -1.32
PTPRT-201ENST00000356100 PRPF4BQ13523 1007 aaKnown RBP6.8□□□□□ -1.32
PTPRT-201ENST00000356100 FAM184BQ9ULE4 1060 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 TOM1O60784 492 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 DKC1O60832 514 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTPRT-201ENST00000356100 SSFA2P28290 1259 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 SMTNP53814 917 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 SLC8A3P57103 927 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 RBM10P98175 930 aaKnown RBP6.8□□□□□ -1.32
PTPRT-201ENST00000356100 MSL1Q68DK7 614 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 ESYT1Q9BSJ8 1104 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 SKILP12757 684 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 CCT2P78371 535 aaKnown RBP6.8□□□□□ -1.32
PTPRT-201ENST00000356100 TPTE2Q6XPS3 522 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 SBNO1A3KN83 1393 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 ERICH4A6NGS2 130 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 NEK11Q8NG66 645 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 ALG1Q9BT22 464 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 KIF24Q5T7B8 1368 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 SPTLC2O15270 562 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 SLU7O95391 586 aaKnown RBP6.8□□□□□ -1.32
PTPRT-201ENST00000356100 F13A1P00488 732 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 ATP8B2P98198 1209 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 GPR161Q8N6U8 529 aaKnown RBP6.8□□□□□ -1.32
PTPRT-201ENST00000356100 ANAPC4Q9UJX5 808 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 CCDC117Q8IWD4 279 aaPredicted RBP6.8□□□□□ -1.32
PTPRT-201ENST00000356100 MPNDQ8N594 471 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 SLC4A4Q9Y6R1 1079 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 FBF1Q8TES7 1133 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 ZBTB3Q9H5J0 574 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 HELLSQ9NRZ9 838 aa6.8□□□□□ -1.32
PTPRT-201ENST00000356100 RNF113AO15541 343 aaKnown RBP6.79□□□□□ -1.32
PTPRT-201ENST00000356100 PARP10Q53GL7 1025 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 EXOC7Q9UPT5 735 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 SDSP20132 328 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 SYT1P21579 422 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 DHX32Q7L7V1 743 aaKnown RBP6.79□□□□□ -1.32
PTPRT-201ENST00000356100 TMOD4Q9NZQ9 345 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 BRF1Q92994 677 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 MTUS1Q9ULD2 1270 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 ZCRB1Q8TBF4 217 aaKnown RBP6.79□□□□□ -1.32
PTPRT-201ENST00000356100 FRMD4BQ9Y2L6 1034 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 PHACTR2O75167 634 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 CHPF2Q9P2E5 772 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 MAGEB6P1A0A0J9YX57 407 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 CCDC129Q6ZRS4 1044 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 ATP6V1AP38606 617 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 CNNM4Q6P4Q7 775 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 TTC6Q86TZ1 520 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 TMX3Q96JJ7 454 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 STX10O60499 249 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 FAM160A1Q05DH4 1040 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 CALCOCO2Q13137 446 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 CDAN1Q8IWY9 1227 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 JDP2Q8WYK2 163 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 PUF60Q9UHX1 559 aaKnown RBP6.79□□□□□ -1.32
PTPRT-201ENST00000356100 USH1CQ9Y6N9 552 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 MRPS9P82933 396 aaKnown RBP6.79□□□□□ -1.32
PTPRT-201ENST00000356100 SEL1L2Q5TEA6 688 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 SMC5Q8IY18 1101 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 SYNMO15061 1565 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 SAMD9Q5K651 1589 aa6.79□□□□□ -1.32
PTPRT-201ENST00000356100 ATP10BO94823 1461 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 F6X3S4 739 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 FAM13AO94988 1023 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 CYP7A1P22680 504 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 POLD1P28340 1107 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 RNF187Q5TA31 235 aaPredicted RBP6.78□□□□□ -1.32
PTPRT-201ENST00000356100 TMEM87BQ96K49 555 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 SAMD15Q9P1V8 674 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 TSKSQ9UJT2 592 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 DENND2AQ9ULE3 1009 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 ERCC6LQ2NKX8 1250 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 STK10O94804 968 aaKnown RBP6.78□□□□□ -1.32
PTPRT-201ENST00000356100 EPB41P11171 864 aaKnown RBP6.78□□□□□ -1.32
PTPRT-201ENST00000356100 SLC9C2Q5TAH2 1124 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 HEATR3Q7Z4Q2 680 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 UBL4BQ8N7F7 174 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 DDX23Q9BUQ8 820 aaKnown RBP6.78□□□□□ -1.32
PTPRT-201ENST00000356100 NUCKS1Q9H1E3 243 aaKnown RBP6.78□□□□□ -1.32
PTPRT-201ENST00000356100 C19orf44Q9H6X5 657 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 ATP6V0A2Q9Y487 856 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 TAOK1Q7L7X3 1001 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 TXNDC16Q9P2K2 825 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 NEO1Q92859 1461 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 PARP1P09874 1014 aaKnown RBP6.78□□□□□ -1.32
PTPRT-201ENST00000356100 DDB1Q16531 1140 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 Q6ZUG5 572 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 STIM2Q9P246 746 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 LUC7L2Q9Y383 392 aaKnown RBP6.78□□□□□ -1.32
PTPRT-201ENST00000356100 SETDB1Q15047 1291 aa6.78□□□□□ -1.32
PTPRT-201ENST00000356100 MKRN1Q9UHC7 482 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms