RNA–Protein interactions for RNA: ENST00000355693.4

COA4-201, Transcript of cytochrome c oxidase assembly factor 4 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COA4, Length 960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA4-201ENST00000355693 SBF1O95248 1867 aa12.85□□□□□ -0.35
COA4-201ENST00000355693 PPEF1O14829 653 aaPredicted RBP12.84□□□□□ -0.35
COA4-201ENST00000355693 PDE8AO60658 829 aa12.84□□□□□ -0.35
COA4-201ENST00000355693 HOXA10P31260 410 aaPredicted RBP12.84□□□□□ -0.35
COA4-201ENST00000355693 RASSF7Q02833 373 aa12.84□□□□□ -0.35
COA4-201ENST00000355693 RBM17Q96I25 401 aaKnown RBP12.84□□□□□ -0.35
COA4-201ENST00000355693 C9orf78Q9NZ63 289 aaPredicted RBP12.84□□□□□ -0.35
COA4-201ENST00000355693 SNED1Q8TER0 1413 aa12.84□□□□□ -0.35
COA4-201ENST00000355693 GRIN3BO60391 1043 aa12.83□□□□□ -0.36
COA4-201ENST00000355693 NBPF7P0C2Y1 421 aaPredicted RBP12.83□□□□□ -0.36
COA4-201ENST00000355693 SF3B3Q15393 1217 aaKnown RBP12.83□□□□□ -0.36
COA4-201ENST00000355693 DDX46Q7L014 1031 aaKnown RBP12.83□□□□□ -0.36
COA4-201ENST00000355693 DZIP1LQ8IYY4 767 aaKnown RBP12.83□□□□□ -0.36
COA4-201ENST00000355693 SUCLG2Q96I99 432 aa12.83□□□□□ -0.36
COA4-201ENST00000355693 DICER1Q9UPY3 1922 aaKnown RBP12.82□□□□□ -0.36
COA4-201ENST00000355693 PLIN1O60240 522 aa12.82□□□□□ -0.36
COA4-201ENST00000355693 ALDH1B1P30837 517 aa12.82□□□□□ -0.36
COA4-201ENST00000355693 CCT4P50991 539 aaKnown RBP12.82□□□□□ -0.36
COA4-201ENST00000355693 GRAPQ13588 217 aa12.82□□□□□ -0.36
COA4-201ENST00000355693 FAM161AQ3B820 660 aa12.82□□□□□ -0.36
COA4-201ENST00000355693 CCDC152Q4G0S7 254 aa12.82□□□□□ -0.36
COA4-201ENST00000355693 EPHA10Q5JZY3 1008 aa12.82□□□□□ -0.36
COA4-201ENST00000355693 INTS3Q68E01 1043 aaKnown RBP12.82□□□□□ -0.36
COA4-201ENST00000355693 B4GALNT3Q6L9W6 998 aa12.82□□□□□ -0.36
COA4-201ENST00000355693 ARHGAP27Q6ZUM4 889 aa12.82□□□□□ -0.36
COA4-201ENST00000355693 FTSJ3Q8IY81 847 aaKnown RBP12.82□□□□□ -0.36
COA4-201ENST00000355693 NKX2-3Q8TAU0 364 aa12.82□□□□□ -0.36
COA4-201ENST00000355693 GRAPLQ8TC17 118 aaPredicted RBP12.82□□□□□ -0.36
COA4-201ENST00000355693 CELF1Q92879 486 aaKnown RBP12.82□□□□□ -0.36
COA4-201ENST00000355693 CRAMP1Q96RY5 1269 aa12.82□□□□□ -0.36
COA4-201ENST00000355693 GREM2Q9H772 168 aa12.82□□□□□ -0.36
COA4-201ENST00000355693 SEC31BQ9NQW1 1179 aa12.82□□□□□ -0.36
COA4-201ENST00000355693 NFKBIEO00221 500 aa12.81□□□□□ -0.36
COA4-201ENST00000355693 HSP90B1P14625 803 aaKnown RBP12.81□□□□□ -0.36
COA4-201ENST00000355693 CCDC93Q567U6 631 aa12.81□□□□□ -0.36
COA4-201ENST00000355693 SWT1Q5T5J6 900 aaKnown RBP12.81□□□□□ -0.36
COA4-201ENST00000355693 TMEM57Q8N5G2 664 aa12.81□□□□□ -0.36
COA4-201ENST00000355693 TTLL11Q8NHH1 800 aa12.81□□□□□ -0.36
COA4-201ENST00000355693 PLA2G12BQ9BX93 195 aa12.81□□□□□ -0.36
COA4-201ENST00000355693 CHMP3Q9Y3E7 222 aa12.81□□□□□ -0.36
COA4-201ENST00000355693 RBM19Q9Y4C8 960 aaKnown RBP12.81□□□□□ -0.36
COA4-201ENST00000355693 UTYO14607 1347 aa12.81□□□□□ -0.36
COA4-201ENST00000355693 RTL9Q8NET4 1388 aa12.81□□□□□ -0.36
COA4-201ENST00000355693 RLBP1P12271 317 aa12.8□□□□□ -0.36
COA4-201ENST00000355693 GGCXP38435 758 aa12.8□□□□□ -0.36
COA4-201ENST00000355693 COPS2P61201 443 aa12.8□□□□□ -0.36
COA4-201ENST00000355693 FOXO4P98177 505 aa12.8□□□□□ -0.36
COA4-201ENST00000355693 PADI6Q6TGC4 694 aa12.8□□□□□ -0.36
COA4-201ENST00000355693 SLF2Q8IX21 1173 aa12.8□□□□□ -0.36
COA4-201ENST00000355693 MEIS3Q99687 375 aa12.8□□□□□ -0.36
COA4-201ENST00000355693 COL4A5P29400 1685 aa12.8□□□□□ -0.36
COA4-201ENST00000355693 MVPQ14764 893 aaKnown RBP12.79□□□□□ -0.36
COA4-201ENST00000355693 C20orf194Q5TEA3 1177 aa12.79□□□□□ -0.36
COA4-201ENST00000355693 PANK1Q8TE04 598 aa12.79□□□□□ -0.36
COA4-201ENST00000355693 C7orf43Q8WVR3 580 aa12.79□□□□□ -0.36
COA4-201ENST00000355693 KAZALD1Q96I82 304 aa12.79□□□□□ -0.36
COA4-201ENST00000355693 CCDC136Q96JN2 1154 aa12.79□□□□□ -0.36
COA4-201ENST00000355693 USP44Q9H0E7 712 aa12.79□□□□□ -0.36
COA4-201ENST00000355693 BICC1Q9H694 974 aaKnown RBP12.79□□□□□ -0.36
COA4-201ENST00000355693 UBTFL1P0CB47 393 aaPredicted RBP12.78□□□□□ -0.36
COA4-201ENST00000355693 ITGA6P23229 1130 aa12.78□□□□□ -0.36
COA4-201ENST00000355693 PRELPP51888 382 aa12.78□□□□□ -0.36
COA4-201ENST00000355693 AAMPQ13685 434 aa12.78□□□□□ -0.36
COA4-201ENST00000355693 SOGA3Q5TF21 947 aa12.78□□□□□ -0.36
COA4-201ENST00000355693 LMBR1LQ6UX01 489 aa12.78□□□□□ -0.36
COA4-201ENST00000355693 ITPRIPQ8IWB1 547 aa12.78□□□□□ -0.36
COA4-201ENST00000355693 ANKRD44Q8N8A2 993 aa12.78□□□□□ -0.36
COA4-201ENST00000355693 EXOC6Q8TAG9 804 aa12.78□□□□□ -0.36
COA4-201ENST00000355693 TAOK3Q9H2K8 898 aa12.78□□□□□ -0.36
COA4-201ENST00000355693 CHMP4BQ9H444 224 aaKnown RBP12.78□□□□□ -0.36
COA4-201ENST00000355693 DDX19BQ9UMR2 479 aa12.78□□□□□ -0.36
COA4-201ENST00000355693 UTRNP46939 3433 aa12.78□□□□□ -0.36
COA4-201ENST00000355693 SLC4A3P48751 1232 aa12.77□□□□□ -0.37
COA4-201ENST00000355693 ANKRD18AQ8IVF6 992 aa12.77□□□□□ -0.37
COA4-201ENST00000355693 TTC13Q8NBP0 860 aa12.77□□□□□ -0.37
COA4-201ENST00000355693 ATP6V0A2Q9Y487 856 aa12.77□□□□□ -0.37
COA4-201ENST00000355693 LRRFIP2Q9Y608 721 aaKnown RBP12.77□□□□□ -0.37
COA4-201ENST00000355693 CSF1RP07333 972 aa12.76□□□□□ -0.37
COA4-201ENST00000355693 FKBP4Q02790 459 aaKnown RBP eCLIP12.76□□□□□ -0.37
COA4-201ENST00000355693 PAXIP1Q6ZW49 1069 aaPredicted RBP12.76□□□□□ -0.37
COA4-201ENST00000355693 CDC5LQ99459 802 aaKnown RBP12.76□□□□□ -0.37
COA4-201ENST00000355693 RNF181Q9P0P0 153 aa12.76□□□□□ -0.37
COA4-201ENST00000355693 ANKRD18BA2A2Z9 1011 aa12.75□□□□□ -0.37
COA4-201ENST00000355693 BBOX1O75936 387 aa12.75□□□□□ -0.37
COA4-201ENST00000355693 RPS8P62241 208 aaKnown RBP12.75□□□□□ -0.37
COA4-201ENST00000355693 RABL6Q3YEC7 729 aaPredicted RBP12.75□□□□□ -0.37
COA4-201ENST00000355693 C9orf131Q5VYM1 1079 aa12.75□□□□□ -0.37
COA4-201ENST00000355693 ZNF594Q96JF6 807 aaPredicted RBP12.75□□□□□ -0.37
COA4-201ENST00000355693 C1orf115Q9H7X2 142 aa12.75□□□□□ -0.37
COA4-201ENST00000355693 NPDC1Q9NQX5 325 aaPredicted RBP12.75□□□□□ -0.37
COA4-201ENST00000355693 ZNF277Q9NRM2 450 aaPredicted RBP12.75□□□□□ -0.37
COA4-201ENST00000355693 LTBP3Q9NS15 1303 aa12.75□□□□□ -0.37
COA4-201ENST00000355693 COG6Q9Y2V7 657 aa12.75□□□□□ -0.37
COA4-201ENST00000355693 ZBTB7BO15156 539 aaPredicted RBP12.74□□□□□ -0.37
COA4-201ENST00000355693 GNAI3P08754 354 aa12.74□□□□□ -0.37
COA4-201ENST00000355693 LMNB1P20700 586 aa12.74□□□□□ -0.37
COA4-201ENST00000355693 IGHMBP2P38935 993 aaKnown RBP12.74□□□□□ -0.37
COA4-201ENST00000355693 GPSM2P81274 684 aa12.74□□□□□ -0.37
COA4-201ENST00000355693 IFIT5Q13325 482 aaKnown RBP12.74□□□□□ -0.37
COA4-201ENST00000355693 TAF7LQ5H9L4 462 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms