RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 EIF6P56537 245 aaKnown RBP14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 SNX21Q969T3 373 aa14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 FEZ1Q99689 392 aa14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 ALG1Q9BT22 464 aa14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 ERBB4Q15303 1308 aa14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 ZSCAN22P10073 491 aaPredicted RBP14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 HMGB2P26583 209 aaKnown RBP14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 KLHL10Q6JEL2 608 aa14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 FILIP1Q7Z7B0 1213 aa14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 NAT10Q9H0A0 1025 aaKnown RBP14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 DIP2AQ14689 1571 aa14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 RAD50Q92878 1312 aa14.36□□□□□ -0.11
PCDHB11-201ENST00000354757 CTDSPL2Q05D32 466 aa14.35□□□□□ -0.11
PCDHB11-201ENST00000354757 ERFEQ4G0M1 354 aa14.35□□□□□ -0.11
PCDHB11-201ENST00000354757 KRT27Q7Z3Y8 459 aa14.35□□□□□ -0.11
PCDHB11-201ENST00000354757 CEP170BQ9Y4F5 1589 aaPredicted RBP14.35□□□□□ -0.11
PCDHB11-201ENST00000354757 TPM1P09493 284 aa14.35□□□□□ -0.11
PCDHB11-201ENST00000354757 SUSD4Q5VX71 490 aa14.35□□□□□ -0.11
PCDHB11-201ENST00000354757 ANKRD2Q9GZV1 360 aa14.35□□□□□ -0.11
PCDHB11-201ENST00000354757 TPM3P06753 285 aa14.35□□□□□ -0.11
PCDHB11-201ENST00000354757 CHRNDQ07001 517 aa14.35□□□□□ -0.11
PCDHB11-201ENST00000354757 OGFOD1Q8N543 542 aa14.35□□□□□ -0.11
PCDHB11-201ENST00000354757 FSIP1Q8NA03 581 aa14.35□□□□□ -0.11
PCDHB11-201ENST00000354757 MARCKSP29966 332 aaPredicted RBP14.34□□□□□ -0.11
PCDHB11-201ENST00000354757 MAP3K11Q16584 847 aa14.34□□□□□ -0.11
PCDHB11-201ENST00000354757 WDR78Q5VTH9 848 aa14.34□□□□□ -0.11
PCDHB11-201ENST00000354757 LAMC1P11047 1609 aa14.34□□□□□ -0.11
PCDHB11-201ENST00000354757 SYT1P21579 422 aa14.34□□□□□ -0.11
PCDHB11-201ENST00000354757 ZNF76P36508 570 aa14.34□□□□□ -0.11
PCDHB11-201ENST00000354757 RTN1Q16799 776 aa14.34□□□□□ -0.11
PCDHB11-201ENST00000354757 GIMAP6Q6P9H5 292 aa14.34□□□□□ -0.11
PCDHB11-201ENST00000354757 SDR42E1Q8WUS8 393 aa14.34□□□□□ -0.11
PCDHB11-201ENST00000354757 GGA1Q9UJY5 639 aa14.34□□□□□ -0.11
PCDHB11-201ENST00000354757 hCG_1642624A0A1W2PR95 340 aa14.34□□□□□ -0.11
PCDHB11-201ENST00000354757 RASEFQ8IZ41 740 aa14.34□□□□□ -0.11
PCDHB11-201ENST00000354757 PTPDC1A2A3K4 754 aa14.34□□□□□ -0.11
PCDHB11-201ENST00000354757 PDE8BO95263 885 aa14.34□□□□□ -0.11
PCDHB11-201ENST00000354757 TTLL12Q14166 644 aaPredicted RBP14.34□□□□□ -0.11
PCDHB11-201ENST00000354757 MAP7D2Q96T17 732 aa14.34□□□□□ -0.11
PCDHB11-201ENST00000354757 CCDC194A0A1B0GVG4 234 aa14.33□□□□□ -0.12
PCDHB11-201ENST00000354757 ECM2O94769 699 aaPredicted RBP14.33□□□□□ -0.12
PCDHB11-201ENST00000354757 CD2BP2O95400 341 aaKnown RBP14.33□□□□□ -0.12
PCDHB11-201ENST00000354757 HLA-DOAP06340 250 aa14.33□□□□□ -0.12
PCDHB11-201ENST00000354757 KRT23Q9C075 422 aa14.33□□□□□ -0.12
PCDHB11-201ENST00000354757 DLC1Q96QB1 1528 aa14.33□□□□□ -0.12
PCDHB11-201ENST00000354757 SERPINC1P01008 464 aa14.33□□□□□ -0.12
PCDHB11-201ENST00000354757 HSPA1LP34931 641 aa14.33□□□□□ -0.12
PCDHB11-201ENST00000354757 IQGAP1P46940 1657 aa14.33□□□□□ -0.12
PCDHB11-201ENST00000354757 ZC3H13Q5T200 1668 aaKnown RBP14.33□□□□□ -0.12
PCDHB11-201ENST00000354757 DPP8Q6V1X1 898 aaPredicted RBP14.33□□□□□ -0.12
PCDHB11-201ENST00000354757 RBM17Q96I25 401 aaKnown RBP14.33□□□□□ -0.12
PCDHB11-201ENST00000354757 GPR101Q96P66 508 aaPredicted RBP14.33□□□□□ -0.12
PCDHB11-201ENST00000354757 DENND2AQ9ULE3 1009 aa14.33□□□□□ -0.12
PCDHB11-201ENST00000354757 MED14O60244 1454 aa14.32□□□□□ -0.12
PCDHB11-201ENST00000354757 GTF2IP78347 998 aa14.32□□□□□ -0.12
PCDHB11-201ENST00000354757 TCP10Q12799 353 aa14.32□□□□□ -0.12
PCDHB11-201ENST00000354757 DOK7Q18PE1 504 aa14.32□□□□□ -0.12
PCDHB11-201ENST00000354757 USP48Q86UV5 1035 aa14.32□□□□□ -0.12
PCDHB11-201ENST00000354757 TEX11Q8IYF3 940 aa14.32□□□□□ -0.12
PCDHB11-201ENST00000354757 ADCK5Q3MIX3 580 aa14.32□□□□□ -0.12
PCDHB11-201ENST00000354757 ZNF589Q86UQ0 364 aaPredicted RBP14.32□□□□□ -0.12
PCDHB11-201ENST00000354757 ZHX1Q9UKY1 873 aaPredicted RBP14.32□□□□□ -0.12
PCDHB11-201ENST00000354757 TECPR2O15040 1411 aa14.32□□□□□ -0.12
PCDHB11-201ENST00000354757 DEPDC5O75140 1603 aa14.32□□□□□ -0.12
PCDHB11-201ENST00000354757 PKP1Q13835 747 aa14.32□□□□□ -0.12
PCDHB11-201ENST00000354757 HELLSQ9NRZ9 838 aa14.32□□□□□ -0.12
PCDHB11-201ENST00000354757 JAK2O60674 1132 aa14.31□□□□□ -0.12
PCDHB11-201ENST00000354757 GSTO1P78417 241 aa14.31□□□□□ -0.12
PCDHB11-201ENST00000354757 MAPKAPK5Q8IW41 473 aa14.31□□□□□ -0.12
PCDHB11-201ENST00000354757 LETM1O95202 739 aaPredicted RBP14.31□□□□□ -0.12
PCDHB11-201ENST00000354757 RPS6KB1P23443 525 aa14.31□□□□□ -0.12
PCDHB11-201ENST00000354757 HSPA4P34932 840 aa14.31□□□□□ -0.12
PCDHB11-201ENST00000354757 TTLL11Q8NHH1 800 aa14.31□□□□□ -0.12
PCDHB11-201ENST00000354757 RICTORQ6R327 1708 aa14.31□□□□□ -0.12
PCDHB11-201ENST00000354757 MROH5Q6ZUA9 1318 aa14.31□□□□□ -0.12
PCDHB11-201ENST00000354757 F13A1P00488 732 aa14.3□□□□□ -0.12
PCDHB11-201ENST00000354757 USP25Q9UHP3 1055 aa14.3□□□□□ -0.12
PCDHB11-201ENST00000354757 CRB1P82279 1406 aa14.3□□□□□ -0.12
PCDHB11-201ENST00000354757 PDE6AP16499 860 aa14.3□□□□□ -0.12
PCDHB11-201ENST00000354757 HSP90AA4PQ58FG1 418 aa14.3□□□□□ -0.12
PCDHB11-201ENST00000354757 HEATR3Q7Z4Q2 680 aa14.3□□□□□ -0.12
PCDHB11-201ENST00000354757 CNNM2Q9H8M5 875 aa14.3□□□□□ -0.12
PCDHB11-201ENST00000354757 CMTR1Q8N1G2 835 aaKnown RBP14.3□□□□□ -0.12
PCDHB11-201ENST00000354757 PHKBQ93100 1093 aa14.3□□□□□ -0.12
PCDHB11-201ENST00000354757 ADCY9O60503 1353 aa14.3□□□□□ -0.12
PCDHB11-201ENST00000354757 CD163L1Q9NR16 1453 aa14.3□□□□□ -0.12
PCDHB11-201ENST00000354757 H0YIN7 160 aa14.3□□□□□ -0.12
PCDHB11-201ENST00000354757 RXRBP28702 533 aa14.3□□□□□ -0.12
PCDHB11-201ENST00000354757 KIF5BP33176 963 aa14.3□□□□□ -0.12
PCDHB11-201ENST00000354757 MARCH10Q8NA82 808 aaPredicted RBP14.3□□□□□ -0.12
PCDHB11-201ENST00000354757 GJA3Q9Y6H8 435 aa14.3□□□□□ -0.12
PCDHB11-201ENST00000354757 CYP19A1P11511 503 aaPredicted RBP14.29□□□□□ -0.12
PCDHB11-201ENST00000354757 CHMP4BP1P59074 171 aa14.29□□□□□ -0.12
PCDHB11-201ENST00000354757 MFSD14BQ5SR56 506 aa14.29□□□□□ -0.12
PCDHB11-201ENST00000354757 JDP2Q8WYK2 163 aa14.29□□□□□ -0.12
PCDHB11-201ENST00000354757 IPO7O95373 1038 aaKnown RBP14.29□□□□□ -0.12
PCDHB11-201ENST00000354757 POLD1P28340 1107 aa14.29□□□□□ -0.12
PCDHB11-201ENST00000354757 SCNN1DP51172 638 aa14.29□□□□□ -0.12
PCDHB11-201ENST00000354757 CEP57L1Q8IYX8 460 aa14.29□□□□□ -0.12
PCDHB11-201ENST00000354757 CABP5Q9NP86 173 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms