RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 C17orf53Q8N3J3 647 aaPredicted RBP12.65□□□□□ -0.38
SND1-201ENST00000354725 STK31Q9BXU1 1019 aa12.65□□□□□ -0.38
SND1-201ENST00000354725 ADCY9O60503 1353 aa12.65□□□□□ -0.39
SND1-201ENST00000354725 DEF6Q9H4E7 631 aa12.64□□□□□ -0.39
SND1-201ENST00000354725 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.64□□□□□ -0.39
SND1-201ENST00000354725 SNX14Q9Y5W7 946 aa12.64□□□□□ -0.39
SND1-201ENST00000354725 KCNQ3O43525 872 aa12.64□□□□□ -0.39
SND1-201ENST00000354725 SLC4A10Q6U841 1118 aa12.64□□□□□ -0.39
SND1-201ENST00000354725 GOLGA6L1Q8N7Z2 621 aa12.64□□□□□ -0.39
SND1-201ENST00000354725 KCNV2Q8TDN2 545 aa12.64□□□□□ -0.39
SND1-201ENST00000354725 LAMA4Q16363 1823 aa12.64□□□□□ -0.39
SND1-201ENST00000354725 WDR33Q9C0J8 1336 aaKnown RBP12.64□□□□□ -0.39
SND1-201ENST00000354725 ANKRD62A6NC57 917 aa12.64□□□□□ -0.39
SND1-201ENST00000354725 TAF7Q15545 349 aaPredicted RBP12.64□□□□□ -0.39
SND1-201ENST00000354725 DDX46Q7L014 1031 aaKnown RBP12.64□□□□□ -0.39
SND1-201ENST00000354725 ITFG2Q969R8 447 aa12.64□□□□□ -0.39
SND1-201ENST00000354725 AKT1S1Q96B36 256 aa12.64□□□□□ -0.39
SND1-201ENST00000354725 TMOD3Q9NYL9 352 aa12.64□□□□□ -0.39
SND1-201ENST00000354725 GADD45BO75293 160 aaPredicted RBP12.63□□□□□ -0.39
SND1-201ENST00000354725 EZH2Q15910 746 aaKnown RBP12.63□□□□□ -0.39
SND1-201ENST00000354725 BEND3Q5T5X7 828 aa12.63□□□□□ -0.39
SND1-201ENST00000354725 SH3BP5O60239 455 aa12.63□□□□□ -0.39
SND1-201ENST00000354725 RBM5P52756 815 aaKnown RBP eCLIP12.63□□□□□ -0.39
SND1-201ENST00000354725 ITPK1Q13572 414 aa12.63□□□□□ -0.39
SND1-201ENST00000354725 ZNF790Q6PG37 636 aa12.63□□□□□ -0.39
SND1-201ENST00000354725 DEFB132Q7Z7B7 95 aa12.63□□□□□ -0.39
SND1-201ENST00000354725 FAM184AQ8NB25 1140 aa12.63□□□□□ -0.39
SND1-201ENST00000354725 NRXN2Q9P2S2 1712 aa12.63□□□□□ -0.39
SND1-201ENST00000354725 TTC41PQ6P2S7 1318 aa12.63□□□□□ -0.39
SND1-201ENST00000354725 A0A1B0GUL7 405 aa12.63□□□□□ -0.39
SND1-201ENST00000354725 CABP4P57796 275 aa12.63□□□□□ -0.39
SND1-201ENST00000354725 SLC27A3Q5K4L6 730 aa12.63□□□□□ -0.39
SND1-201ENST00000354725 USP48Q86UV5 1035 aa12.63□□□□□ -0.39
SND1-201ENST00000354725 MICALL1Q8N3F8 863 aa12.63□□□□□ -0.39
SND1-201ENST00000354725 KLHL42Q9P2K6 505 aa12.63□□□□□ -0.39
SND1-201ENST00000354725 LCMT1Q9UIC8 334 aa12.63□□□□□ -0.39
SND1-201ENST00000354725 KLHL33A6NCF5 533 aa12.62□□□□□ -0.39
SND1-201ENST00000354725 APBA3O96018 575 aa12.62□□□□□ -0.39
SND1-201ENST00000354725 CALRP27797 417 aaKnown RBP12.62□□□□□ -0.39
SND1-201ENST00000354725 ZFYVE27Q5T4F4 411 aa12.62□□□□□ -0.39
SND1-201ENST00000354725 RUFY3Q7L099 469 aa12.62□□□□□ -0.39
SND1-201ENST00000354725 TSPY26PQ9H489 355 aa12.62□□□□□ -0.39
SND1-201ENST00000354725 EN1Q05925 392 aaPredicted RBP12.62□□□□□ -0.39
SND1-201ENST00000354725 SWT1Q5T5J6 900 aaKnown RBP12.62□□□□□ -0.39
SND1-201ENST00000354725 RHPN1Q8TCX5 695 aa12.62□□□□□ -0.39
SND1-201ENST00000354725 UTYO14607 1347 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 MECOMQ03112 1051 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 ST3GAL1Q11201 340 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 PPP2R5AQ15172 486 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 C11orf91Q3C1V1 193 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 JMYQ8N9B5 988 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 ANO2Q9NQ90 1003 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 ST7Q9NRC1 585 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 SUGT1Q9Y2Z0 365 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 ANKRD36CQ5JPF3 1778 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 ATP6V1AP38606 617 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 EIF4A1P60842 406 aaKnown RBP12.61□□□□□ -0.39
SND1-201ENST00000354725 LRP10Q7Z4F1 713 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 AMIGO3Q86WK7 504 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 RASEFQ8IZ41 740 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 TM6SF1Q9BZW5 370 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 TXNRD1Q16881 649 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 PPP1R42Q7Z4L9 355 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 LINC00116Q8NCU8 138 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 HYPKQ9NX55 129 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 GABBR1Q9UBS5 961 aa12.61□□□□□ -0.39
SND1-201ENST00000354725 KIF13BQ9NQT8 1826 aa12.6□□□□□ -0.39
SND1-201ENST00000354725 KIF3CO14782 793 aa12.6□□□□□ -0.39
SND1-201ENST00000354725 ZC3H12AQ5D1E8 599 aaKnown RBP12.6□□□□□ -0.39
SND1-201ENST00000354725 UBTFL1P0CB47 393 aaPredicted RBP12.6□□□□□ -0.39
SND1-201ENST00000354725 ZSCAN22P10073 491 aaPredicted RBP12.6□□□□□ -0.39
SND1-201ENST00000354725 SLC39A6Q13433 755 aa12.6□□□□□ -0.39
SND1-201ENST00000354725 KRBA2Q6ZNG9 492 aa12.6□□□□□ -0.39
SND1-201ENST00000354725 RPAINQ86UA6 219 aa12.6□□□□□ -0.39
SND1-201ENST00000354725 KIF1BPQ96EK5 621 aa12.6□□□□□ -0.39
SND1-201ENST00000354725 TSPAN18Q96SJ8 248 aa12.6□□□□□ -0.39
SND1-201ENST00000354725 PHAXQ9H814 394 aaKnown RBP12.6□□□□□ -0.39
SND1-201ENST00000354725 KIAA1551Q9HCM1 1747 aa12.6□□□□□ -0.39
SND1-201ENST00000354725 LOC102724428A0A0B4J2F2 783 aa12.6□□□□□ -0.39
SND1-201ENST00000354725 SIK1P57059 783 aa12.6□□□□□ -0.39
SND1-201ENST00000354725 E2F4Q16254 413 aa12.6□□□□□ -0.39
SND1-201ENST00000354725 TTC31Q49AM3 519 aaPredicted RBP12.6□□□□□ -0.39
SND1-201ENST00000354725 SMARCC1Q92922 1105 aaPredicted RBP12.6□□□□□ -0.39
SND1-201ENST00000354725 SYAP1Q96A49 352 aaPredicted RBP12.6□□□□□ -0.39
SND1-201ENST00000354725 ARFGEF2Q9Y6D5 1785 aa12.6□□□□□ -0.39
SND1-201ENST00000354725 LRP5O75197 1615 aa12.59□□□□□ -0.39
SND1-201ENST00000354725 BTBD11A6QL63 1104 aa12.59□□□□□ -0.39
SND1-201ENST00000354725 ALDH8A1Q9H2A2 487 aaPredicted RBP12.59□□□□□ -0.39
SND1-201ENST00000354725 AK2P54819 239 aa12.59□□□□□ -0.39
SND1-201ENST00000354725 CCDC183Q5T5S1 534 aa12.59□□□□□ -0.39
SND1-201ENST00000354725 INTS5Q6P9B9 1019 aaKnown RBP12.59□□□□□ -0.39
SND1-201ENST00000354725 ZNF496Q96IT1 587 aaPredicted RBP12.59□□□□□ -0.39
SND1-201ENST00000354725 UPF3BQ9BZI7 483 aaKnown RBP12.59□□□□□ -0.39
SND1-201ENST00000354725 FRMD4BQ9Y2L6 1034 aa12.59□□□□□ -0.39
SND1-201ENST00000354725 CNTNAP4Q9C0A0 1308 aa12.59□□□□□ -0.39
SND1-201ENST00000354725 ZNF827Q17R98 1081 aa12.58□□□□□ -0.39
SND1-201ENST00000354725 TXLNBQ8N3L3 684 aa12.58□□□□□ -0.39
SND1-201ENST00000354725 TTC30BQ8N4P2 665 aa12.58□□□□□ -0.39
SND1-201ENST00000354725 TTC12Q9H892 705 aaPredicted RBP12.58□□□□□ -0.39
SND1-201ENST00000354725 ZSWIM6Q9HCJ5 1215 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms