RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 CCDC144CPQ8IYA2 1237 aa22.88■■□□□ 1.25
COL13A1-201ENST00000354547 GLI3P10071 1580 aa22.87■■□□□ 1.25
COL13A1-201ENST00000354547 CHAF1AQ13111 956 aaPredicted RBP22.87■■□□□ 1.25
COL13A1-201ENST00000354547 C8orf76Q96K31 380 aa22.87■■□□□ 1.25
COL13A1-201ENST00000354547 GPAA1O43292 621 aa22.87■■□□□ 1.25
COL13A1-201ENST00000354547 CNNM1Q9NRU3 951 aa22.87■■□□□ 1.25
COL13A1-201ENST00000354547 ORC3Q9UBD5 711 aaPredicted RBP22.87■■□□□ 1.25
COL13A1-201ENST00000354547 CTNNA3Q9UI47 895 aa22.87■■□□□ 1.25
COL13A1-201ENST00000354547 PCDHA7Q9UN72 937 aa22.87■■□□□ 1.25
COL13A1-201ENST00000354547 CLIC4Q9Y696 253 aa22.87■■□□□ 1.25
COL13A1-201ENST00000354547 A0A0G2JS52 829 aa22.87■■□□□ 1.25
COL13A1-201ENST00000354547 ATP2B3Q16720 1220 aa22.87■■□□□ 1.25
COL13A1-201ENST00000354547 ZSCAN25Q6NSZ9 544 aa22.87■■□□□ 1.25
COL13A1-201ENST00000354547 GREM2Q9H772 168 aa22.87■■□□□ 1.25
COL13A1-201ENST00000354547 PKD1L3Q7Z443 1732 aa22.86■■□□□ 1.25
COL13A1-201ENST00000354547 SALL1Q9NSC2 1324 aa22.86■■□□□ 1.25
COL13A1-201ENST00000354547 RIOK3O14730 519 aaKnown RBP22.86■■□□□ 1.25
COL13A1-201ENST00000354547 ZNF213O14771 459 aa22.86■■□□□ 1.25
COL13A1-201ENST00000354547 IDH1O75874 414 aaKnown RBP22.86■■□□□ 1.25
COL13A1-201ENST00000354547 STK38Q15208 465 aa22.86■■□□□ 1.25
COL13A1-201ENST00000354547 SYTL4Q96C24 671 aaPredicted RBP22.86■■□□□ 1.25
COL13A1-201ENST00000354547 ATG3Q9NT62 314 aa22.86■■□□□ 1.25
COL13A1-201ENST00000354547 CACTINQ8WUQ7 758 aaKnown RBP22.86■■□□□ 1.25
COL13A1-201ENST00000354547 FAM160A1Q05DH4 1040 aa22.85■■□□□ 1.25
COL13A1-201ENST00000354547 IQCB1Q15051 598 aa22.85■■□□□ 1.25
COL13A1-201ENST00000354547 STX1AQ16623 288 aa22.85■■□□□ 1.25
COL13A1-201ENST00000354547 FILIP1Q7Z7B0 1213 aa22.85■■□□□ 1.25
COL13A1-201ENST00000354547 KLHL34Q8N239 644 aa22.85■■□□□ 1.25
COL13A1-201ENST00000354547 STRCP1A6NGW2 1772 aa22.85■■□□□ 1.25
COL13A1-201ENST00000354547 ITGA6P23229 1130 aa22.85■■□□□ 1.25
COL13A1-201ENST00000354547 HELBQ8NG08 1087 aaPredicted RBP22.85■■□□□ 1.25
COL13A1-201ENST00000354547 PIGBQ92521 554 aa22.85■■□□□ 1.25
COL13A1-201ENST00000354547 MCAMP43121 646 aa22.84■■□□□ 1.25
COL13A1-201ENST00000354547 LRRFIP1Q32MZ4 808 aaKnown RBP22.84■■□□□ 1.25
COL13A1-201ENST00000354547 SLC9C2Q5TAH2 1124 aa22.84■■□□□ 1.25
COL13A1-201ENST00000354547 APPBP2Q92624 585 aa22.84■■□□□ 1.25
COL13A1-201ENST00000354547 BIN1O00499 593 aa22.84■■□□□ 1.25
COL13A1-201ENST00000354547 ANTXR2P58335 489 aa22.84■■□□□ 1.25
COL13A1-201ENST00000354547 NKX2-3Q8TAU0 364 aa22.84■■□□□ 1.25
COL13A1-201ENST00000354547 MAP7D2Q96T17 732 aa22.84■■□□□ 1.25
COL13A1-201ENST00000354547 KCPQ6ZWJ8 1503 aa22.84■■□□□ 1.25
COL13A1-201ENST00000354547 ZNF710Q8N1W2 664 aa22.84■■□□□ 1.25
COL13A1-201ENST00000354547 NCOA7Q8NI08 942 aa22.84■■□□□ 1.25
COL13A1-201ENST00000354547 AIFM3Q96NN9 605 aa22.84■■□□□ 1.25
COL13A1-201ENST00000354547 CARD10Q9BWT7 1032 aa22.84■■□□□ 1.25
COL13A1-201ENST00000354547 NKX1-1Q15270 411 aaPredicted RBP22.83■■□□□ 1.25
COL13A1-201ENST00000354547 AOPEPQ8N6M6 819 aa22.83■■□□□ 1.25
COL13A1-201ENST00000354547 PCCAP05165 728 aaPredicted RBP22.83■■□□□ 1.24
COL13A1-201ENST00000354547 NDUFA8P51970 172 aa22.83■■□□□ 1.24
COL13A1-201ENST00000354547 ZBTB38Q8NAP3 1195 aaPredicted RBP22.83■■□□□ 1.24
COL13A1-201ENST00000354547 ENGASEQ8NFI3 743 aa22.83■■□□□ 1.24
COL13A1-201ENST00000354547 LAMB4A4D0S4 1761 aa22.83■■□□□ 1.24
COL13A1-201ENST00000354547 ISM2Q6H9L7 571 aa22.82■■□□□ 1.24
COL13A1-201ENST00000354547 MRPS27Q92552 414 aaKnown RBP22.82■■□□□ 1.24
COL13A1-201ENST00000354547 HPS5Q9UPZ3 1129 aa22.82■■□□□ 1.24
COL13A1-201ENST00000354547 TJP1Q07157 1748 aa22.82■■□□□ 1.24
COL13A1-201ENST00000354547 CTAGE5O15320 804 aa22.82■■□□□ 1.24
COL13A1-201ENST00000354547 ZFYP08048 801 aaPredicted RBP22.82■■□□□ 1.24
COL13A1-201ENST00000354547 ZNF592Q92610 1267 aa22.82■■□□□ 1.24
COL13A1-201ENST00000354547 INCENPQ9NQS7 918 aa22.82■■□□□ 1.24
COL13A1-201ENST00000354547 MB21D2Q8IYB1 491 aaPredicted RBP22.82■■□□□ 1.24
COL13A1-201ENST00000354547 SNAP23O00161 211 aa22.81■■□□□ 1.24
COL13A1-201ENST00000354547 STK11IPQ8N1F8 1099 aa22.81■■□□□ 1.24
COL13A1-201ENST00000354547 BCL2L12Q9HB09 334 aa22.81■■□□□ 1.24
COL13A1-201ENST00000354547 TRMT112Q9UI30 125 aaKnown RBP22.81■■□□□ 1.24
COL13A1-201ENST00000354547 COL5A2P05997 1499 aaPredicted RBP22.81■■□□□ 1.24
COL13A1-201ENST00000354547 STARD3NLO95772 234 aa22.81■■□□□ 1.24
COL13A1-201ENST00000354547 TBC1D2BQ9UPU7 963 aa22.81■■□□□ 1.24
COL13A1-201ENST00000354547 KIF28PB7ZC32 967 aa22.8■■□□□ 1.24
COL13A1-201ENST00000354547 MARCKSP29966 332 aaPredicted RBP22.8■■□□□ 1.24
COL13A1-201ENST00000354547 TRDNQ13061 729 aa22.8■■□□□ 1.24
COL13A1-201ENST00000354547 ZRSR1Q15695 479 aaKnown RBP22.8■■□□□ 1.24
COL13A1-201ENST00000354547 TPD52L1Q16890 204 aaPredicted RBP22.8■■□□□ 1.24
COL13A1-201ENST00000354547 SYNE3Q6ZMZ3 975 aa22.8■■□□□ 1.24
COL13A1-201ENST00000354547 TTLL11Q8NHH1 800 aa22.8■■□□□ 1.24
COL13A1-201ENST00000354547 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.8■■□□□ 1.24
COL13A1-201ENST00000354547 SLAIN2Q9P270 581 aa22.8■■□□□ 1.24
COL13A1-201ENST00000354547 DCCP43146 1447 aa22.8■■□□□ 1.24
COL13A1-201ENST00000354547 ANO10Q9NW15 660 aa22.8■■□□□ 1.24
COL13A1-201ENST00000354547 DHX40Q8IX18 779 aaKnown RBP22.79■■□□□ 1.24
COL13A1-201ENST00000354547 LINC00301Q8NCQ3 95 aa22.79■■□□□ 1.24
COL13A1-201ENST00000354547 FBXO18Q8NFZ0 1043 aa22.79■■□□□ 1.24
COL13A1-201ENST00000354547 SENP2Q9HC62 589 aa22.79■■□□□ 1.24
COL13A1-201ENST00000354547 DHX16O60231 1041 aaKnown RBP22.79■■□□□ 1.24
COL13A1-201ENST00000354547 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.79■■□□□ 1.24
COL13A1-201ENST00000354547 ZMYND15Q9H091 742 aa22.79■■□□□ 1.24
COL13A1-201ENST00000354547 PIH1D3Q9NQM4 214 aaKnown RBP22.79■■□□□ 1.24
COL13A1-201ENST00000354547 RIPOR2Q9Y4F9 1068 aa22.79■■□□□ 1.24
COL13A1-201ENST00000354547 IRS4O14654 1257 aaPredicted RBP22.79■■□□□ 1.24
COL13A1-201ENST00000354547 CSF1RP07333 972 aa22.79■■□□□ 1.24
COL13A1-201ENST00000354547 NUP188Q5SRE5 1749 aa22.79■■□□□ 1.24
COL13A1-201ENST00000354547 PHKBQ93100 1093 aa22.79■■□□□ 1.24
COL13A1-201ENST00000354547 MYL10Q9BUA6 226 aa22.79■■□□□ 1.24
COL13A1-201ENST00000354547 RTEL1Q9NZ71 1219 aa22.79■■□□□ 1.24
COL13A1-201ENST00000354547 TNNT1P13805 278 aa22.78■■□□□ 1.24
COL13A1-201ENST00000354547 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.78■■□□□ 1.24
COL13A1-201ENST00000354547 NLRP10Q86W26 655 aa22.78■■□□□ 1.24
COL13A1-201ENST00000354547 MICU3Q86XE3 530 aa22.78■■□□□ 1.24
COL13A1-201ENST00000354547 CEP57L1Q8IYX8 460 aa22.78■■□□□ 1.24
COL13A1-201ENST00000354547 FMR1NBQ8N0W7 255 aaPredicted RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms