RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 MST1RQ04912 1400 aa13.25□□□□□ -0.29
CAPN9-202ENST00000354537 SCN11AQ9UI33 1791 aa13.25□□□□□ -0.29
CAPN9-202ENST00000354537 NEDD4P46934 1319 aa13.25□□□□□ -0.29
CAPN9-202ENST00000354537 CCT2P78371 535 aaKnown RBP13.25□□□□□ -0.29
CAPN9-202ENST00000354537 FBXO18Q8NFZ0 1043 aa13.25□□□□□ -0.29
CAPN9-202ENST00000354537 IFNKQ9P0W0 207 aa13.25□□□□□ -0.29
CAPN9-202ENST00000354537 IL15P40933 162 aaPredicted RBP13.24□□□□□ -0.29
CAPN9-202ENST00000354537 ETF1P62495 437 aaKnown RBP13.24□□□□□ -0.29
CAPN9-202ENST00000354537 NCAPHQ15003 741 aa13.24□□□□□ -0.29
CAPN9-202ENST00000354537 DPCR1Q3MIW9 517 aa13.24□□□□□ -0.29
CAPN9-202ENST00000354537 TMC6Q7Z403 805 aa13.24□□□□□ -0.29
CAPN9-202ENST00000354537 ATG3Q9NT62 314 aa13.24□□□□□ -0.29
CAPN9-202ENST00000354537 ARGLU1Q9NWB6 273 aaPredicted RBP13.24□□□□□ -0.29
CAPN9-202ENST00000354537 FAM237AA0A1B0GTK4 181 aa13.24□□□□□ -0.29
CAPN9-202ENST00000354537 A0A1B0GVL5 298 aa13.24□□□□□ -0.29
CAPN9-202ENST00000354537 SMC2O95347 1197 aa13.24□□□□□ -0.29
CAPN9-202ENST00000354537 MYSM1Q5VVJ2 828 aa13.24□□□□□ -0.29
CAPN9-202ENST00000354537 PLBD2Q8NHP8 589 aa13.24□□□□□ -0.29
CAPN9-202ENST00000354537 C8orf76Q96K31 380 aa13.24□□□□□ -0.29
CAPN9-202ENST00000354537 TMX1Q9H3N1 280 aa13.24□□□□□ -0.29
CAPN9-202ENST00000354537 TUBE1Q9UJT0 475 aa13.24□□□□□ -0.29
CAPN9-202ENST00000354537 H7C1W4 665 aa13.23□□□□□ -0.29
CAPN9-202ENST00000354537 ZNF202O95125 648 aa13.23□□□□□ -0.29
CAPN9-202ENST00000354537 MYL6BP14649 208 aa13.23□□□□□ -0.29
CAPN9-202ENST00000354537 UBE3BQ7Z3V4 1068 aa13.23□□□□□ -0.29
CAPN9-202ENST00000354537 ELOA2Q8IYF1 753 aaPredicted RBP13.23□□□□□ -0.29
CAPN9-202ENST00000354537 ZNF446Q9NWS9 450 aa13.23□□□□□ -0.29
CAPN9-202ENST00000354537 A0A087WZG4 1122 aa13.23□□□□□ -0.29
CAPN9-202ENST00000354537 GOLIM4O00461 696 aa13.23□□□□□ -0.29
CAPN9-202ENST00000354537 CIAO1O76071 339 aa13.23□□□□□ -0.29
CAPN9-202ENST00000354537 ZFYP08048 801 aaPredicted RBP13.23□□□□□ -0.29
CAPN9-202ENST00000354537 SYNE3Q6ZMZ3 975 aa13.23□□□□□ -0.29
CAPN9-202ENST00000354537 ATG9AQ7Z3C6 839 aa13.23□□□□□ -0.29
CAPN9-202ENST00000354537 NCOA5Q9HCD5 579 aaKnown RBP13.23□□□□□ -0.29
CAPN9-202ENST00000354537 KDM6AO15550 1401 aaPredicted RBP13.23□□□□□ -0.29
CAPN9-202ENST00000354537 MAST3O60307 1309 aa13.23□□□□□ -0.29
CAPN9-202ENST00000354537 IGSF3O75054 1194 aa13.22□□□□□ -0.29
CAPN9-202ENST00000354537 FOXO4P98177 505 aa13.22□□□□□ -0.29
CAPN9-202ENST00000354537 FANCCQ00597 558 aa13.22□□□□□ -0.29
CAPN9-202ENST00000354537 ESCO1Q5FWF5 840 aa13.22□□□□□ -0.29
CAPN9-202ENST00000354537 AXDND1Q5T1B0 1012 aaPredicted RBP13.22□□□□□ -0.29
CAPN9-202ENST00000354537 SYT10Q6XYQ8 523 aa13.22□□□□□ -0.29
CAPN9-202ENST00000354537 CALCOCO1Q9P1Z2 691 aa13.22□□□□□ -0.29
CAPN9-202ENST00000354537 CLIC4Q9Y696 253 aa13.22□□□□□ -0.29
CAPN9-202ENST00000354537 AFDNP55196 1824 aaKnown RBP13.22□□□□□ -0.29
CAPN9-202ENST00000354537 SLC39A14Q15043 492 aa13.22□□□□□ -0.29
CAPN9-202ENST00000354537 ANO1Q5XXA6 986 aa13.22□□□□□ -0.29
CAPN9-202ENST00000354537 ARFGEF2Q9Y6D5 1785 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 GOLGA6L9A6NEM1 432 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 ZSCAN12O43309 604 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 PPP6R2O75170 966 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 PHKG2P15735 406 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 ERCC6LQ2NKX8 1250 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 JMYQ8N9B5 988 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 FMNL2Q96PY5 1086 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.21□□□□□ -0.29
CAPN9-202ENST00000354537 FHOD1Q9Y613 1164 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 NDUFB9Q9Y6M9 179 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 V9GYY5 206 aaPredicted RBP13.21□□□□□ -0.29
CAPN9-202ENST00000354537 ABCC12Q96J65 1359 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 EFCAB8A8MWE9 144 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 ZRANB2O95218 330 aaKnown RBP eCLIP13.21□□□□□ -0.29
CAPN9-202ENST00000354537 CHGBP05060 677 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 IMMTQ16891 758 aaKnown RBP13.21□□□□□ -0.29
CAPN9-202ENST00000354537 LMBR1LQ6UX01 489 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 RAPGEF4Q8WZA2 1011 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 ZNF496Q96IT1 587 aaPredicted RBP13.21□□□□□ -0.29
CAPN9-202ENST00000354537 NOL10Q9BSC4 688 aaKnown RBP13.21□□□□□ -0.29
CAPN9-202ENST00000354537 DNAI1Q9UI46 699 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 FBXO3Q9UK99 471 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 HPSEQ9Y251 543 aa13.21□□□□□ -0.29
CAPN9-202ENST00000354537 IFIT1P09914 478 aaKnown RBP13.2□□□□□ -0.3
CAPN9-202ENST00000354537 CLCN6P51797 869 aa13.2□□□□□ -0.3
CAPN9-202ENST00000354537 FOSBP53539 338 aa13.2□□□□□ -0.3
CAPN9-202ENST00000354537 GUCY1B3Q02153 619 aa13.2□□□□□ -0.3
CAPN9-202ENST00000354537 SLC39A6Q13433 755 aa13.2□□□□□ -0.3
CAPN9-202ENST00000354537 UBXN4Q92575 508 aa13.2□□□□□ -0.3
CAPN9-202ENST00000354537 MPHOSPH8Q99549 860 aa13.2□□□□□ -0.3
CAPN9-202ENST00000354537 ORC3Q9UBD5 711 aaPredicted RBP13.2□□□□□ -0.3
CAPN9-202ENST00000354537 A0A087WWV3 80 aa13.2□□□□□ -0.3
CAPN9-202ENST00000354537 PFKFB1P16118 471 aa13.2□□□□□ -0.3
CAPN9-202ENST00000354537 MYL5Q02045 173 aa13.2□□□□□ -0.3
CAPN9-202ENST00000354537 KIF23Q02241 960 aaPredicted RBP13.2□□□□□ -0.3
CAPN9-202ENST00000354537 TRIM65Q6PJ69 517 aa13.2□□□□□ -0.3
CAPN9-202ENST00000354537 MB21D2Q8IYB1 491 aaPredicted RBP13.2□□□□□ -0.3
CAPN9-202ENST00000354537 IFNL2Q8IZJ0 200 aa13.2□□□□□ -0.3
CAPN9-202ENST00000354537 TTC5Q8N0Z6 440 aa13.2□□□□□ -0.3
CAPN9-202ENST00000354537 SETD1BQ9UPS6 1966 aaKnown RBP13.2□□□□□ -0.3
CAPN9-202ENST00000354537 FER1L4A9Z1Z3 1794 aa13.2□□□□□ -0.3
CAPN9-202ENST00000354537 EYA2O00167 538 aa13.19□□□□□ -0.3
CAPN9-202ENST00000354537 TATP17735 454 aaPredicted RBP13.19□□□□□ -0.3
CAPN9-202ENST00000354537 CYP2C19P33261 490 aa13.19□□□□□ -0.3
CAPN9-202ENST00000354537 ARHGAP29Q52LW3 1261 aa13.19□□□□□ -0.3
CAPN9-202ENST00000354537 CCDC158Q5M9N0 1113 aa13.19□□□□□ -0.3
CAPN9-202ENST00000354537 TMCO3Q6UWJ1 677 aa13.19□□□□□ -0.3
CAPN9-202ENST00000354537 HOMER1Q86YM7 354 aa13.19□□□□□ -0.3
CAPN9-202ENST00000354537 VSTM4Q8IW00 320 aa13.19□□□□□ -0.3
CAPN9-202ENST00000354537 NFATC2IPQ8NCF5 419 aa13.19□□□□□ -0.3
CAPN9-202ENST00000354537 DCAF5Q96JK2 942 aa13.19□□□□□ -0.3
CAPN9-202ENST00000354537 NEUROD6Q96NK8 337 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms