RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 RIPOR2Q9Y4F9 1068 aa21.31■■□□□ 1
APP-203ENST00000354192 TYRO3Q06418 890 aa21.3■■□□□ 1
APP-203ENST00000354192 LRP2BPQ9P2M1 347 aa21.3■■□□□ 1
APP-203ENST00000354192 PDE8AO60658 829 aa21.3■■□□□ 1
APP-203ENST00000354192 PDE8BO95263 885 aa21.3■■□□□ 1
APP-203ENST00000354192 KIAA2012Q0VF49 1180 aa21.3■■□□□ 1
APP-203ENST00000354192 CMTR1Q8N1G2 835 aaKnown RBP21.3■■□□□ 1
APP-203ENST00000354192 NKX2-3Q8TAU0 364 aa21.3■■□□□ 1
APP-203ENST00000354192 ZKSCAN5Q9Y2L8 839 aa21.3■■□□□ 1
APP-203ENST00000354192 CCAR1Q8IX12 1150 aaKnown RBP21.3■■□□□ 1
APP-203ENST00000354192 C8orf76Q96K31 380 aa21.3■■□□□ 1
APP-203ENST00000354192 TRIM5Q9C035 493 aa21.3■■□□□ 1
APP-203ENST00000354192 MINDY4BA8MYZ0 360 aa21.29■■□□□ 1
APP-203ENST00000354192 PRKAB2O43741 272 aa21.29■■□□□ 1
APP-203ENST00000354192 MCM5P33992 734 aa21.29■■□□□ 1
APP-203ENST00000354192 TMEM87AQ8NBN3 555 aa21.29■■□□□ 1
APP-203ENST00000354192 SENP2Q9HC62 589 aa21.29■■□□□ 1
APP-203ENST00000354192 GPR108Q9NPR9 543 aa21.29■■□□□ 1
APP-203ENST00000354192 COL18A1P39060 1754 aa21.29■■□□□ 1
APP-203ENST00000354192 PFKFB2O60825 505 aa21.29■■□□□ 1
APP-203ENST00000354192 NCOA7Q8NI08 942 aa21.29■■□□□ 1
APP-203ENST00000354192 MBD4O95243 580 aa21.28■■□□□ 1
APP-203ENST00000354192 VPS37DQ86XT2 251 aa21.28■■□□□ 1
APP-203ENST00000354192 PDLIM2Q96JY6 352 aa21.28■■□□□ 1
APP-203ENST00000354192 SDF4Q9BRK5 362 aa21.28■■□□□ 1
APP-203ENST00000354192 NOL7Q9UMY1 257 aaKnown RBP21.28■■□□□ 1
APP-203ENST00000354192 BIN1O00499 593 aa21.28■■□□□ 1
APP-203ENST00000354192 TSGA10IPQ3SY00 556 aa21.28■■□□□ 1
APP-203ENST00000354192 C8orf37Q96NL8 207 aa21.28■■□□□ 1
APP-203ENST00000354192 LOC102724428A0A0B4J2F2 783 aa21.28■■□□□ 1
APP-203ENST00000354192 A0A1B0GVL5 298 aa21.28■■□□□ 1
APP-203ENST00000354192 UBE2Q2LH0YL09 131 aa21.28■■□□□ 1
APP-203ENST00000354192 LETM1O95202 739 aaPredicted RBP21.28■■□□□ 1
APP-203ENST00000354192 MARCKSP29966 332 aaPredicted RBP21.28■■□□□ 1
APP-203ENST00000354192 TDO2P48775 406 aa21.28■■□□□ 1
APP-203ENST00000354192 SIK1P57059 783 aa21.28■■□□□ 1
APP-203ENST00000354192 RESTQ13127 1097 aa21.28■■□□□ 1
APP-203ENST00000354192 CCDC73Q6ZRK6 1079 aa21.28■■□□□ 1
APP-203ENST00000354192 KIF3AQ9Y496 699 aa21.28■■□□□ 1
APP-203ENST00000354192 LMTK3Q96Q04 1460 aa21.27■■□□□ 1
APP-203ENST00000354192 STK38Q15208 465 aa21.27■■□□□ 1
APP-203ENST00000354192 NAPBQ9H115 298 aa21.27■■□□□ 1
APP-203ENST00000354192 SIPA1L3O60292 1781 aaPredicted RBP21.27■■□□□ 1
APP-203ENST00000354192 AP5Z1O43299 807 aa21.27■■□□□ 1
APP-203ENST00000354192 PDE6AP16499 860 aa21.27■■□□□ 1
APP-203ENST00000354192 FSIP1Q8NA03 581 aa21.27■■□□□ 1
APP-203ENST00000354192 NUP133Q8WUM0 1156 aa21.27■■□□□ 1
APP-203ENST00000354192 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.27■■□□□ 1
APP-203ENST00000354192 CFAP45Q9UL16 551 aa21.27■■□□□ 1
APP-203ENST00000354192 CSF1RP07333 972 aa21.26■□□□□ 0.99
APP-203ENST00000354192 PIBF1Q8WXW3 757 aa21.26■□□□□ 0.99
APP-203ENST00000354192 UTP14AQ9BVJ6 771 aaKnown RBP21.26■□□□□ 0.99
APP-203ENST00000354192 RAI14Q9P0K7 980 aa21.26■□□□□ 0.99
APP-203ENST00000354192 IGHMBP2P38935 993 aaKnown RBP21.26■□□□□ 0.99
APP-203ENST00000354192 ZRSR1Q15695 479 aaKnown RBP21.26■□□□□ 0.99
APP-203ENST00000354192 CCDC87Q9NVE4 849 aa21.26■□□□□ 0.99
APP-203ENST00000354192 FAM13BQ9NYF5 915 aa21.26■□□□□ 0.99
APP-203ENST00000354192 MTMR7Q9Y216 660 aa21.26■□□□□ 0.99
APP-203ENST00000354192 EXOSC10Q01780 885 aaKnown RBP21.25■□□□□ 0.99
APP-203ENST00000354192 ITPK1Q13572 414 aa21.25■□□□□ 0.99
APP-203ENST00000354192 TBC1D10CQ8IV04 446 aa21.25■□□□□ 0.99
APP-203ENST00000354192 GYG1P46976 350 aa21.25■□□□□ 0.99
APP-203ENST00000354192 RASGRF1Q13972 1273 aa21.25■□□□□ 0.99
APP-203ENST00000354192 PTF1AQ7RTS3 328 aa21.25■□□□□ 0.99
APP-203ENST00000354192 PALLDQ8WX93 1383 aa21.24■□□□□ 0.99
APP-203ENST00000354192 FOXP2O15409 715 aa21.24■□□□□ 0.99
APP-203ENST00000354192 KINO60870 393 aaKnown RBP21.24■□□□□ 0.99
APP-203ENST00000354192 ZFYP08048 801 aaPredicted RBP21.24■□□□□ 0.99
APP-203ENST00000354192 SLC5A1P13866 664 aa21.24■□□□□ 0.99
APP-203ENST00000354192 ZNF165P49910 485 aa21.24■□□□□ 0.99
APP-203ENST00000354192 HMGN5P82970 282 aaKnown RBP21.24■□□□□ 0.99
APP-203ENST00000354192 SYNE3Q6ZMZ3 975 aa21.24■□□□□ 0.99
APP-203ENST00000354192 MARCH10Q8NA82 808 aaPredicted RBP21.24■□□□□ 0.99
APP-203ENST00000354192 VSIG10Q8N0Z9 540 aa21.24■□□□□ 0.99
APP-203ENST00000354192 ARFGEF2Q9Y6D5 1785 aa21.24■□□□□ 0.99
APP-203ENST00000354192 SPATA5Q8NB90 893 aa21.24■□□□□ 0.99
APP-203ENST00000354192 NGLY1Q96IV0 654 aa21.24■□□□□ 0.99
APP-203ENST00000354192 BECN2A8MW95 431 aa21.23■□□□□ 0.99
APP-203ENST00000354192 TRIM28Q13263 835 aaKnown RBP21.23■□□□□ 0.99
APP-203ENST00000354192 PUM3Q15397 648 aaKnown RBP21.23■□□□□ 0.99
APP-203ENST00000354192 MRVI1Q9Y6F6 885 aa21.23■□□□□ 0.99
APP-203ENST00000354192 N4BP2Q86UW6 1770 aaPredicted RBP21.23■□□□□ 0.99
APP-203ENST00000354192 SMIM22K7EJ46 135 aa21.23■□□□□ 0.99
APP-203ENST00000354192 IFIT3O14879 490 aaKnown RBP21.23■□□□□ 0.99
APP-203ENST00000354192 CHAF1AQ13111 956 aaPredicted RBP21.23■□□□□ 0.99
APP-203ENST00000354192 CYB5R4Q7L1T6 521 aa21.23■□□□□ 0.99
APP-203ENST00000354192 SDR42E1Q8WUS8 393 aa21.23■□□□□ 0.99
APP-203ENST00000354192 TSC1Q92574 1164 aa21.23■□□□□ 0.99
APP-203ENST00000354192 KCPQ6ZWJ8 1503 aa21.23■□□□□ 0.99
APP-203ENST00000354192 hCG_1642624A0A1W2PR95 340 aa21.22■□□□□ 0.99
APP-203ENST00000354192 PRDM1O75626 825 aa21.22■□□□□ 0.99
APP-203ENST00000354192 ADD2P35612 726 aa21.22■□□□□ 0.99
APP-203ENST00000354192 METAP2P50579 478 aaKnown RBP eCLIP21.22■□□□□ 0.99
APP-203ENST00000354192 ANTXR2P58335 489 aa21.22■□□□□ 0.99
APP-203ENST00000354192 TMEM67Q5HYA8 995 aa21.22■□□□□ 0.99
APP-203ENST00000354192 CBX8Q9HC52 389 aa21.22■□□□□ 0.99
APP-203ENST00000354192 FDPSP14324 419 aaKnown RBP21.22■□□□□ 0.99
APP-203ENST00000354192 CLIC4Q9Y696 253 aa21.22■□□□□ 0.99
APP-203ENST00000354192 MRC1P22897 1456 aa21.22■□□□□ 0.99
APP-203ENST00000354192 GOLGA6L19H0YKK7 550 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms