RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 PIK3R4Q99570 1358 aa16.36■□□□□ 0.21
SPPL3-201ENST00000353487 KDM5AP29375 1690 aaKnown RBP16.36■□□□□ 0.21
SPPL3-201ENST00000353487 ATP5J2-PTCD1G3V325 749 aa16.36■□□□□ 0.21
SPPL3-201ENST00000353487 PTCD1O75127 700 aaKnown RBP16.36■□□□□ 0.21
SPPL3-201ENST00000353487 AFMP43652 599 aa16.36■□□□□ 0.21
SPPL3-201ENST00000353487 IL25Q9H293 177 aa16.36■□□□□ 0.21
SPPL3-201ENST00000353487 VEZTQ9HBM0 779 aa16.36■□□□□ 0.21
SPPL3-201ENST00000353487 GOLGA6L9A6NEM1 432 aa16.36■□□□□ 0.21
SPPL3-201ENST00000353487 CHMP4BP1P59074 171 aa16.36■□□□□ 0.21
SPPL3-201ENST00000353487 RBM28Q9NW13 759 aaKnown RBP16.36■□□□□ 0.21
SPPL3-201ENST00000353487 FMNL3Q8IVF7 1028 aa16.35■□□□□ 0.21
SPPL3-201ENST00000353487 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.35■□□□□ 0.21
SPPL3-201ENST00000353487 IMMTQ16891 758 aaKnown RBP16.35■□□□□ 0.21
SPPL3-201ENST00000353487 KCNG4Q8TDN1 519 aa16.35■□□□□ 0.21
SPPL3-201ENST00000353487 NCAPGQ9BPX3 1015 aa16.35■□□□□ 0.21
SPPL3-201ENST00000353487 ZSWIM6Q9HCJ5 1215 aa16.35■□□□□ 0.21
SPPL3-201ENST00000353487 A0A0D9SFI3 127 aa16.35■□□□□ 0.21
SPPL3-201ENST00000353487 DPCR1Q3MIW9 517 aa16.35■□□□□ 0.21
SPPL3-201ENST00000353487 TTC39AQ5SRH9 613 aa16.35■□□□□ 0.21
SPPL3-201ENST00000353487 SERPINA10Q9UK55 444 aa16.35■□□□□ 0.21
SPPL3-201ENST00000353487 TMEM87AQ8NBN3 555 aa16.34■□□□□ 0.21
SPPL3-201ENST00000353487 CTIFO43310 598 aaKnown RBP16.34■□□□□ 0.21
SPPL3-201ENST00000353487 ZNF853P0CG23 659 aa16.34■□□□□ 0.21
SPPL3-201ENST00000353487 HPDP32754 393 aaPredicted RBP16.34■□□□□ 0.21
SPPL3-201ENST00000353487 ESCO1Q5FWF5 840 aa16.34■□□□□ 0.21
SPPL3-201ENST00000353487 IQCEQ6IPM2 695 aa16.34■□□□□ 0.21
SPPL3-201ENST00000353487 CEP83Q9Y592 693 aa16.34■□□□□ 0.21
SPPL3-201ENST00000353487 SHROOM2Q13796 1616 aa16.34■□□□□ 0.21
SPPL3-201ENST00000353487 CLASP1Q7Z460 1538 aa16.34■□□□□ 0.21
SPPL3-201ENST00000353487 MYL5Q02045 173 aa16.34■□□□□ 0.21
SPPL3-201ENST00000353487 UBE3BQ7Z3V4 1068 aa16.34■□□□□ 0.21
SPPL3-201ENST00000353487 RGS22Q8NE09 1264 aa16.34■□□□□ 0.21
SPPL3-201ENST00000353487 N4BP2L2Q92802 583 aaPredicted RBP16.34■□□□□ 0.21
SPPL3-201ENST00000353487 GOPCQ9HD26 462 aa16.34■□□□□ 0.21
SPPL3-201ENST00000353487 TTC41PQ6P2S7 1318 aa16.34■□□□□ 0.21
SPPL3-201ENST00000353487 HMGB1P09429 215 aaKnown RBP16.34■□□□□ 0.21
SPPL3-201ENST00000353487 IFIT1P09914 478 aaKnown RBP16.34■□□□□ 0.21
SPPL3-201ENST00000353487 ACTN2P35609 894 aa16.34■□□□□ 0.21
SPPL3-201ENST00000353487 TRMT44Q8IYL2 757 aaKnown RBP16.34■□□□□ 0.21
SPPL3-201ENST00000353487 NLRP2Q9NX02 1062 aa16.34■□□□□ 0.21
SPPL3-201ENST00000353487 MAGEC2Q9UBF1 373 aaPredicted RBP16.34■□□□□ 0.21
SPPL3-201ENST00000353487 GUCA1BQ9UMX6 200 aa16.34■□□□□ 0.21
SPPL3-201ENST00000353487 ZNF202O95125 648 aa16.33■□□□□ 0.21
SPPL3-201ENST00000353487 SEC62Q99442 399 aaKnown RBP16.33■□□□□ 0.21
SPPL3-201ENST00000353487 DBF4Q9UBU7 674 aaPredicted RBP16.33■□□□□ 0.21
SPPL3-201ENST00000353487 TMCO5BA8MYB1 307 aa16.33■□□□□ 0.2
SPPL3-201ENST00000353487 SYCP1Q15431 976 aa16.33■□□□□ 0.2
SPPL3-201ENST00000353487 DIXDC1Q155Q3 683 aa16.33■□□□□ 0.2
SPPL3-201ENST00000353487 HSF2BPO75031 334 aa16.33■□□□□ 0.2
SPPL3-201ENST00000353487 IDH1O75874 414 aaKnown RBP16.33■□□□□ 0.2
SPPL3-201ENST00000353487 CEP85LQ5SZL2 805 aa16.33■□□□□ 0.2
SPPL3-201ENST00000353487 BCAS4Q8TDM0 211 aa16.33■□□□□ 0.2
SPPL3-201ENST00000353487 PUS7Q96PZ0 661 aaKnown RBP16.33■□□□□ 0.2
SPPL3-201ENST00000353487 SPHKAPQ2M3C7 1700 aa16.32■□□□□ 0.2
SPPL3-201ENST00000353487 CTAGE9A4FU28 777 aa16.32■□□□□ 0.2
SPPL3-201ENST00000353487 ST5P78524 1137 aa16.32■□□□□ 0.2
SPPL3-201ENST00000353487 IRAK4Q9NWZ3 460 aa16.32■□□□□ 0.2
SPPL3-201ENST00000353487 SAMM50Q9Y512 469 aa16.32■□□□□ 0.2
SPPL3-201ENST00000353487 ACEP12821 1306 aa16.32■□□□□ 0.2
SPPL3-201ENST00000353487 CCDC160A6NGH7 325 aa16.32■□□□□ 0.2
SPPL3-201ENST00000353487 N4BP3O15049 544 aa16.32■□□□□ 0.2
SPPL3-201ENST00000353487 BUB1BO60566 1050 aaPredicted RBP16.32■□□□□ 0.2
SPPL3-201ENST00000353487 PAFAH1B1P43034 410 aa16.32■□□□□ 0.2
SPPL3-201ENST00000353487 PLEKHO1Q53GL0 409 aaPredicted RBP16.32■□□□□ 0.2
SPPL3-201ENST00000353487 TRIM22Q8IYM9 498 aa16.32■□□□□ 0.2
SPPL3-201ENST00000353487 PGBD1Q96JS3 809 aa16.32■□□□□ 0.2
SPPL3-201ENST00000353487 CCDC158Q5M9N0 1113 aa16.32■□□□□ 0.2
SPPL3-201ENST00000353487 CPLX4Q7Z7G2 160 aa16.32■□□□□ 0.2
SPPL3-201ENST00000353487 ODF2LQ9ULJ1 636 aa16.32■□□□□ 0.2
SPPL3-201ENST00000353487 MRFAP1Q9Y605 127 aa16.32■□□□□ 0.2
SPPL3-201ENST00000353487 UBE4AQ14139 1066 aa16.31■□□□□ 0.2
SPPL3-201ENST00000353487 ZFYVE27Q5T4F4 411 aa16.31■□□□□ 0.2
SPPL3-201ENST00000353487 TBC1D31Q96DN5 1066 aa16.31■□□□□ 0.2
SPPL3-201ENST00000353487 ALG1Q9BT22 464 aa16.31■□□□□ 0.2
SPPL3-201ENST00000353487 KIAA1468Q9P260 1216 aa16.31■□□□□ 0.2
SPPL3-201ENST00000353487 YTHDC2Q9H6S0 1430 aaKnown RBP16.31■□□□□ 0.2
SPPL3-201ENST00000353487 GOLGA6CA6NDK9 693 aa16.31■□□□□ 0.2
SPPL3-201ENST00000353487 GOLGA6DP0CG33 693 aa16.31■□□□□ 0.2
SPPL3-201ENST00000353487 GOLGA6AQ9NYA3 693 aa16.31■□□□□ 0.2
SPPL3-201ENST00000353487 IMPACTQ9P2X3 320 aa16.31■□□□□ 0.2
SPPL3-201ENST00000353487 SUFUQ9UMX1 484 aa16.31■□□□□ 0.2
SPPL3-201ENST00000353487 TET3O43151 1660 aa16.3■□□□□ 0.2
SPPL3-201ENST00000353487 ATP1A3P13637 1013 aa16.3■□□□□ 0.2
SPPL3-201ENST00000353487 MCM3P25205 808 aa16.3■□□□□ 0.2
SPPL3-201ENST00000353487 NDUFA8P51970 172 aa16.3■□□□□ 0.2
SPPL3-201ENST00000353487 MCMDC2Q4G0Z9 681 aa16.3■□□□□ 0.2
SPPL3-201ENST00000353487 DHX32Q7L7V1 743 aaKnown RBP16.3■□□□□ 0.2
SPPL3-201ENST00000353487 CCDC47Q96A33 483 aaKnown RBP16.3■□□□□ 0.2
SPPL3-201ENST00000353487 EYA1Q99502 592 aa16.3■□□□□ 0.2
SPPL3-201ENST00000353487 CXorf56Q9H5V9 222 aa16.3■□□□□ 0.2
SPPL3-201ENST00000353487 MKRN1Q9UHC7 482 aaKnown RBP16.3■□□□□ 0.2
SPPL3-201ENST00000353487 FAN1Q9Y2M0 1017 aa16.3■□□□□ 0.2
SPPL3-201ENST00000353487 WWC2Q6AWC2 1192 aa16.3■□□□□ 0.2
SPPL3-201ENST00000353487 MCTP2Q6DN12 878 aa16.3■□□□□ 0.2
SPPL3-201ENST00000353487 PLA2G4DQ86XP0 818 aa16.3■□□□□ 0.2
SPPL3-201ENST00000353487 CEP112Q8N8E3 955 aa16.3■□□□□ 0.2
SPPL3-201ENST00000353487 TANGO6Q9C0B7 1094 aa16.3■□□□□ 0.2
SPPL3-201ENST00000353487 SPATS2LQ9NUQ6 558 aaKnown RBP16.3■□□□□ 0.2
SPPL3-201ENST00000353487 ZRSR2Q15696 482 aaKnown RBP16.3■□□□□ 0.2
SPPL3-201ENST00000353487 BRMS1Q9HCU9 246 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms