RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 SSFA2P28290 1259 aa12.78□□□□□ -0.36
SLC6A20-201ENST00000353278 IFI16Q16666 785 aaKnown RBP12.78□□□□□ -0.36
SLC6A20-201ENST00000353278 USP48Q86UV5 1035 aa12.78□□□□□ -0.36
SLC6A20-201ENST00000353278 TESK2Q96S53 571 aa12.78□□□□□ -0.36
SLC6A20-201ENST00000353278 GTPBP4Q9BZE4 634 aaKnown RBP12.78□□□□□ -0.36
SLC6A20-201ENST00000353278 CCDC171Q6TFL3 1326 aa12.78□□□□□ -0.36
SLC6A20-201ENST00000353278 AFMP43652 599 aa12.78□□□□□ -0.36
SLC6A20-201ENST00000353278 TNFAIP1Q13829 316 aa12.78□□□□□ -0.36
SLC6A20-201ENST00000353278 PTPN14Q15678 1187 aa12.78□□□□□ -0.36
SLC6A20-201ENST00000353278 ZNF354CQ86Y25 554 aa12.78□□□□□ -0.36
SLC6A20-201ENST00000353278 CLIP2Q9UDT6 1046 aa12.78□□□□□ -0.36
SLC6A20-201ENST00000353278 AKR1B10O60218 316 aa12.78□□□□□ -0.36
SLC6A20-201ENST00000353278 KRT2P35908 639 aa12.78□□□□□ -0.36
SLC6A20-201ENST00000353278 CEP85Q6P2H3 762 aa12.78□□□□□ -0.36
SLC6A20-201ENST00000353278 NAA15Q9BXJ9 866 aaKnown RBP12.78□□□□□ -0.36
SLC6A20-201ENST00000353278 SSX2IPQ9Y2D8 614 aa12.78□□□□□ -0.36
SLC6A20-201ENST00000353278 PLEKHG3A1L390 1219 aa12.77□□□□□ -0.36
SLC6A20-201ENST00000353278 GSDMDP57764 484 aa12.77□□□□□ -0.36
SLC6A20-201ENST00000353278 PRPF4BQ13523 1007 aaKnown RBP12.77□□□□□ -0.36
SLC6A20-201ENST00000353278 ZBTB21Q9ULJ3 1066 aa12.77□□□□□ -0.36
SLC6A20-201ENST00000353278 COL17A1Q9UMD9 1497 aaPredicted RBP12.77□□□□□ -0.36
SLC6A20-201ENST00000353278 RXRBP28702 533 aa12.77□□□□□ -0.36
SLC6A20-201ENST00000353278 DYDC1Q8WWB3 177 aa12.77□□□□□ -0.36
SLC6A20-201ENST00000353278 CARD14Q9BXL6 1004 aa12.77□□□□□ -0.36
SLC6A20-201ENST00000353278 GLT8D2Q9H1C3 349 aa12.77□□□□□ -0.36
SLC6A20-201ENST00000353278 UBE2HP62256 183 aa12.77□□□□□ -0.37
SLC6A20-201ENST00000353278 PRKG1Q13976 671 aa12.77□□□□□ -0.37
SLC6A20-201ENST00000353278 MAP9Q49MG5 647 aa12.77□□□□□ -0.37
SLC6A20-201ENST00000353278 LPIN2Q92539 896 aa12.77□□□□□ -0.37
SLC6A20-201ENST00000353278 FAM212AQ96EL1 285 aa12.77□□□□□ -0.37
SLC6A20-201ENST00000353278 GDPD2Q9HCC8 539 aa12.77□□□□□ -0.37
SLC6A20-201ENST00000353278 TMX3Q96JJ7 454 aa12.77□□□□□ -0.37
SLC6A20-201ENST00000353278 CCDC113Q9H0I3 377 aa12.77□□□□□ -0.37
SLC6A20-201ENST00000353278 HELLSQ9NRZ9 838 aa12.77□□□□□ -0.37
SLC6A20-201ENST00000353278 NEMFO60524 1076 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 MCM3P25205 808 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 ZNF165P49910 485 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 IRX3P78415 501 aaPredicted RBP12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 CCDC102AQ96A19 550 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 DCTPP1Q9H773 170 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 CSADQ9Y600 493 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 ZBED4O75132 1171 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 TIMM10P62072 90 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 IFFO1Q0D2I5 559 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 DHX32Q7L7V1 743 aaKnown RBP12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 NLGN1Q8N2Q7 840 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 ZFYVE16Q7Z3T8 1539 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 DKC1O60832 514 aaKnown RBP eCLIP12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 CCDC117Q8IWD4 279 aaPredicted RBP12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 CCDC24Q8N4L8 307 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 SMCR8Q8TEV9 937 aaPredicted RBP12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 CNKSR1Q969H4 720 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 TBC1D2Q9BYX2 928 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 IGHDP01880 384 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 ZSCAN22P10073 491 aaPredicted RBP12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 RPS8P62241 208 aaKnown RBP12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 MSANTD4Q8NCY6 345 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 MRPS27Q92552 414 aaKnown RBP12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 GPCPD1Q9NPB8 672 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 TMEM94Q12767 1356 aa12.76□□□□□ -0.37
SLC6A20-201ENST00000353278 IL13P35225 146 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 LMAN1P49257 510 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 MSL1Q68DK7 614 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 ZNF496Q96IT1 587 aaPredicted RBP12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 LGR6Q9HBX8 967 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 CASQ1P31415 396 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 KIF18AQ8NI77 898 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 MRVI1Q9Y6F6 885 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 TCOF1Q13428 1488 aaKnown RBP12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 YEATS2Q9ULM3 1422 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 NOP56O00567 594 aaKnown RBP12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 URI1O94763 535 aaPredicted RBP12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 ISM2Q6H9L7 571 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 ARHGAP27Q6ZUM4 889 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 CTAGE1Q96RT6 745 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 GOPCQ9HD26 462 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 PARD3Q8TEW0 1356 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 MROH5Q6ZUA9 1318 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 ZYXQ15942 572 aaKnown RBP12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 DTHD1Q6ZMT9 781 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 FAM196AQ6ZSG2 479 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 TMC6Q7Z403 805 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 FCHSD1Q86WN1 690 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 XAGE2Q96GT9 111 aa12.75□□□□□ -0.37
SLC6A20-201ENST00000353278 GCOM1H8Y6P7 765 aaPredicted RBP12.74□□□□□ -0.37
SLC6A20-201ENST00000353278 MYZAPP0CAP1 466 aa12.74□□□□□ -0.37
SLC6A20-201ENST00000353278 LTKP29376 864 aa12.74□□□□□ -0.37
SLC6A20-201ENST00000353278 CEP83Q9Y592 693 aa12.74□□□□□ -0.37
SLC6A20-201ENST00000353278 PCDHB15Q9Y5E8 787 aa12.74□□□□□ -0.37
SLC6A20-201ENST00000353278 CTTNBP2Q8WZ74 1663 aa12.74□□□□□ -0.37
SLC6A20-201ENST00000353278 TNNI3KQ59H18 835 aa12.74□□□□□ -0.37
SLC6A20-201ENST00000353278 FPGT-TNNI3KV9GXZ4 949 aa12.74□□□□□ -0.37
SLC6A20-201ENST00000353278 C2CD5Q86YS7 1000 aa12.74□□□□□ -0.37
SLC6A20-201ENST00000353278 PLCD3Q8N3E9 789 aa12.74□□□□□ -0.37
SLC6A20-201ENST00000353278 APPBP2Q92624 585 aa12.74□□□□□ -0.37
SLC6A20-201ENST00000353278 TSNARE1Q96NA8 513 aa12.74□□□□□ -0.37
SLC6A20-201ENST00000353278 SLC5A4Q9NY91 659 aa12.74□□□□□ -0.37
SLC6A20-201ENST00000353278 GOLGA6L9A6NEM1 432 aa12.74□□□□□ -0.37
SLC6A20-201ENST00000353278 SLC1A4P43007 532 aa12.74□□□□□ -0.37
SLC6A20-201ENST00000353278 CREB3L3Q68CJ9 461 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms