RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 NBPF5PQ86XG9 351 aaPredicted RBP12.21□□□□□ -0.46
PKP1-202ENST00000352845 ERCC4Q92889 916 aaPredicted RBP12.21□□□□□ -0.46
PKP1-202ENST00000352845 NBPF4Q96M43 638 aa12.21□□□□□ -0.46
PKP1-202ENST00000352845 LARP6Q9BRS8 491 aaKnown RBP12.21□□□□□ -0.46
PKP1-202ENST00000352845 TM6SF1Q9BZW5 370 aa12.21□□□□□ -0.46
PKP1-202ENST00000352845 LSG1Q9H089 658 aaKnown RBP12.21□□□□□ -0.46
PKP1-202ENST00000352845 L1RE1Q9UN81 338 aa12.21□□□□□ -0.46
PKP1-202ENST00000352845 NALCNQ8IZF0 1738 aa12.2□□□□□ -0.46
PKP1-202ENST00000352845 CRYBG1Q9Y4K1 1723 aa12.2□□□□□ -0.46
PKP1-202ENST00000352845 ANKRD33BA6NCL7 494 aa12.2□□□□□ -0.46
PKP1-202ENST00000352845 EXOC5O00471 708 aa12.2□□□□□ -0.46
PKP1-202ENST00000352845 CHUKO15111 745 aa12.2□□□□□ -0.46
PKP1-202ENST00000352845 SCP2P22307 547 aa12.2□□□□□ -0.46
PKP1-202ENST00000352845 MSANTD4Q8NCY6 345 aa12.2□□□□□ -0.46
PKP1-202ENST00000352845 CTCFLQ8NI51 663 aaPredicted RBP12.2□□□□□ -0.46
PKP1-202ENST00000352845 PI4K2BQ8TCG2 481 aa12.2□□□□□ -0.46
PKP1-202ENST00000352845 FAM210AQ96ND0 272 aa12.2□□□□□ -0.46
PKP1-202ENST00000352845 BPIFA3Q9BQP9 254 aa12.2□□□□□ -0.46
PKP1-202ENST00000352845 TSPYL4Q9UJ04 414 aa12.2□□□□□ -0.46
PKP1-202ENST00000352845 TTC36A6NLP5 189 aa12.19□□□□□ -0.46
PKP1-202ENST00000352845 EBAG9O00559 213 aa12.19□□□□□ -0.46
PKP1-202ENST00000352845 SEMA3FQ13275 785 aa12.19□□□□□ -0.46
PKP1-202ENST00000352845 TMC6Q7Z403 805 aa12.19□□□□□ -0.46
PKP1-202ENST00000352845 AFAP1L1Q8TED9 768 aa12.19□□□□□ -0.46
PKP1-202ENST00000352845 ITFG2Q969R8 447 aa12.19□□□□□ -0.46
PKP1-202ENST00000352845 BICC1Q9H694 974 aaKnown RBP12.19□□□□□ -0.46
PKP1-202ENST00000352845 DTNBO60941 627 aa12.19□□□□□ -0.46
PKP1-202ENST00000352845 KCNA6P17658 529 aa12.19□□□□□ -0.46
PKP1-202ENST00000352845 LIG3P49916 1009 aa12.19□□□□□ -0.46
PKP1-202ENST00000352845 MRPL12P52815 198 aaKnown RBP12.19□□□□□ -0.46
PKP1-202ENST00000352845 SCRN1Q12765 414 aa12.19□□□□□ -0.46
PKP1-202ENST00000352845 FLIIQ13045 1269 aa12.19□□□□□ -0.46
PKP1-202ENST00000352845 MTHFSDQ2M296 383 aaKnown RBP12.19□□□□□ -0.46
PKP1-202ENST00000352845 NBPF3Q9H094 633 aa12.19□□□□□ -0.46
PKP1-202ENST00000352845 VIPAS39Q9H9C1 493 aa12.19□□□□□ -0.46
PKP1-202ENST00000352845 IL1RAPL2Q9NP60 686 aa12.19□□□□□ -0.46
PKP1-202ENST00000352845 RGPD8O14715 1765 aaPredicted RBP12.19□□□□□ -0.46
PKP1-202ENST00000352845 MAP3K19Q56UN5 1328 aa12.19□□□□□ -0.46
PKP1-202ENST00000352845 LRRC37A3O60309 1634 aa12.18□□□□□ -0.46
PKP1-202ENST00000352845 MAP4K4O95819 1239 aaPredicted RBP12.18□□□□□ -0.46
PKP1-202ENST00000352845 INPP5BP32019 993 aa12.18□□□□□ -0.46
PKP1-202ENST00000352845 ST3GAL1Q11201 340 aa12.18□□□□□ -0.46
PKP1-202ENST00000352845 PREPLQ4J6C6 727 aaPredicted RBP12.18□□□□□ -0.46
PKP1-202ENST00000352845 CEP112Q8N8E3 955 aa12.18□□□□□ -0.46
PKP1-202ENST00000352845 USP44Q9H0E7 712 aa12.18□□□□□ -0.46
PKP1-202ENST00000352845 EPC1Q9H2F5 836 aa12.18□□□□□ -0.46
PKP1-202ENST00000352845 ANKRD65E5RJM6 399 aa12.18□□□□□ -0.46
PKP1-202ENST00000352845 CPA1P15085 419 aa12.18□□□□□ -0.46
PKP1-202ENST00000352845 PLEKHO1Q53GL0 409 aaPredicted RBP12.18□□□□□ -0.46
PKP1-202ENST00000352845 FAM43BQ6ZT52 329 aaPredicted RBP12.18□□□□□ -0.46
PKP1-202ENST00000352845 AMOTL1Q8IY63 956 aa12.18□□□□□ -0.46
PKP1-202ENST00000352845 AOPEPQ8N6M6 819 aa12.18□□□□□ -0.46
PKP1-202ENST00000352845 SSH3Q8TE77 659 aa12.18□□□□□ -0.46
PKP1-202ENST00000352845 SYTL4Q96C24 671 aaPredicted RBP12.18□□□□□ -0.46
PKP1-202ENST00000352845 JPH2Q9BR39 696 aaPredicted RBP12.18□□□□□ -0.46
PKP1-202ENST00000352845 TRIM6Q9C030 488 aaPredicted RBP12.18□□□□□ -0.46
PKP1-202ENST00000352845 FAM204AQ9H8W3 233 aa12.18□□□□□ -0.46
PKP1-202ENST00000352845 CFAP45Q9UL16 551 aa12.18□□□□□ -0.46
PKP1-202ENST00000352845 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.18□□□□□ -0.46
PKP1-202ENST00000352845 FAM169AQ9Y6X4 670 aa12.18□□□□□ -0.46
PKP1-202ENST00000352845 SOS1Q07889 1333 aaPredicted RBP12.18□□□□□ -0.46
PKP1-202ENST00000352845 SHOX2O60902 331 aaPredicted RBP12.17□□□□□ -0.46
PKP1-202ENST00000352845 NEBLO76041 1014 aa12.17□□□□□ -0.46
PKP1-202ENST00000352845 AARSP49588 968 aaKnown RBP eCLIP12.17□□□□□ -0.46
PKP1-202ENST00000352845 CDC37L1Q7L3B6 337 aa12.17□□□□□ -0.46
PKP1-202ENST00000352845 SRGAP1Q7Z6B7 1085 aa12.17□□□□□ -0.46
PKP1-202ENST00000352845 ANKLE2Q86XL3 938 aa12.17□□□□□ -0.46
PKP1-202ENST00000352845 SPATS2Q86XZ4 545 aaKnown RBP12.17□□□□□ -0.46
PKP1-202ENST00000352845 CCDC102AQ96A19 550 aa12.17□□□□□ -0.46
PKP1-202ENST00000352845 PGBD1Q96JS3 809 aa12.17□□□□□ -0.46
PKP1-202ENST00000352845 ACEP12821 1306 aa12.17□□□□□ -0.46
PKP1-202ENST00000352845 ARHGAP6O43182 974 aa12.17□□□□□ -0.46
PKP1-202ENST00000352845 CHMP4BP1P59074 171 aa12.17□□□□□ -0.46
PKP1-202ENST00000352845 SF3B2Q13435 895 aaKnown RBP12.17□□□□□ -0.46
PKP1-202ENST00000352845 CACNA1FO60840 1977 aa12.16□□□□□ -0.46
PKP1-202ENST00000352845 PXDNLA1KZ92 1463 aa12.16□□□□□ -0.46
PKP1-202ENST00000352845 A0A1B0GUA9 196 aa12.16□□□□□ -0.46
PKP1-202ENST00000352845 VWA3AA6NCI4 1184 aa12.16□□□□□ -0.46
PKP1-202ENST00000352845 FANCGO15287 622 aa12.16□□□□□ -0.46
PKP1-202ENST00000352845 CLSTN1O94985 981 aa12.16□□□□□ -0.46
PKP1-202ENST00000352845 ICA1Q05084 483 aa12.16□□□□□ -0.46
PKP1-202ENST00000352845 CASP8Q14790 479 aa12.16□□□□□ -0.46
PKP1-202ENST00000352845 FBXW10Q5XX13 1052 aa12.16□□□□□ -0.46
PKP1-202ENST00000352845 N4BP2L2Q92802 583 aaPredicted RBP12.16□□□□□ -0.46
PKP1-202ENST00000352845 XPO4Q9C0E2 1151 aaKnown RBP12.16□□□□□ -0.46
PKP1-202ENST00000352845 CYP46A1Q9Y6A2 500 aa12.16□□□□□ -0.46
PKP1-202ENST00000352845 USP31Q70CQ4 1352 aa12.16□□□□□ -0.46
PKP1-202ENST00000352845 FMN2Q9NZ56 1722 aa12.16□□□□□ -0.46
PKP1-202ENST00000352845 N4BP1O75113 896 aaKnown RBP12.15□□□□□ -0.46
PKP1-202ENST00000352845 GNG11P61952 73 aa12.15□□□□□ -0.46
PKP1-202ENST00000352845 POLA2Q14181 598 aa12.15□□□□□ -0.46
PKP1-202ENST00000352845 CPLX2Q6PUV4 134 aaKnown RBP12.15□□□□□ -0.46
PKP1-202ENST00000352845 CCDC73Q6ZRK6 1079 aa12.15□□□□□ -0.46
PKP1-202ENST00000352845 ZSWIM6Q9HCJ5 1215 aa12.15□□□□□ -0.46
PKP1-202ENST00000352845 CHD2O14647 1828 aaKnown RBP12.15□□□□□ -0.46
PKP1-202ENST00000352845 PLEKHG3A1L390 1219 aa12.15□□□□□ -0.46
PKP1-202ENST00000352845 CBFA2T2O43439 604 aa12.15□□□□□ -0.46
PKP1-202ENST00000352845 KINO60870 393 aaKnown RBP12.15□□□□□ -0.46
PKP1-202ENST00000352845 FSBPO95073 299 aa12.15□□□□□ -0.46
PKP1-202ENST00000352845 KIF4BQ2VIQ3 1234 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms