RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 N4BP2L2Q92802 583 aaPredicted RBP15.21■□□□□ 0.02
IFT88-202ENST00000351808 BAG1Q99933 345 aaPredicted RBP15.21■□□□□ 0.02
IFT88-202ENST00000351808 ACBD3Q9H3P7 528 aa15.21■□□□□ 0.02
IFT88-202ENST00000351808 PREX1Q8TCU6 1659 aa15.2■□□□□ 0.02
IFT88-202ENST00000351808 MYO1FO00160 1098 aa15.2■□□□□ 0.02
IFT88-202ENST00000351808 IBSPP21815 317 aaPredicted RBP15.2■□□□□ 0.02
IFT88-202ENST00000351808 PDILTQ8N807 584 aa15.2■□□□□ 0.02
IFT88-202ENST00000351808 IGSF22Q8N9C0 903 aa15.2■□□□□ 0.02
IFT88-202ENST00000351808 CABS1Q96KC9 395 aa15.2■□□□□ 0.02
IFT88-202ENST00000351808 SIL1Q9H173 461 aa15.2■□□□□ 0.02
IFT88-202ENST00000351808 EHD4Q9H223 541 aa15.2■□□□□ 0.02
IFT88-202ENST00000351808 HSD3B7Q9H2F3 369 aa15.2■□□□□ 0.02
IFT88-202ENST00000351808 DEPDC5O75140 1603 aa15.2■□□□□ 0.02
IFT88-202ENST00000351808 SLC27A2O14975 620 aa15.2■□□□□ 0.02
IFT88-202ENST00000351808 PRPF6O94906 941 aaKnown RBP15.2■□□□□ 0.02
IFT88-202ENST00000351808 PRPF38AQ8NAV1 312 aaKnown RBP15.2■□□□□ 0.02
IFT88-202ENST00000351808 SMARCC1Q92922 1105 aaPredicted RBP15.2■□□□□ 0.02
IFT88-202ENST00000351808 VEZTQ9HBM0 779 aa15.2■□□□□ 0.02
IFT88-202ENST00000351808 A1CFQ9NQ94 594 aaKnown RBP15.2■□□□□ 0.02
IFT88-202ENST00000351808 HSP90B1P14625 803 aaKnown RBP15.19■□□□□ 0.02
IFT88-202ENST00000351808 HDGFL2Q7Z4V5 671 aaPredicted RBP15.19■□□□□ 0.02
IFT88-202ENST00000351808 VSTM4Q8IW00 320 aa15.19■□□□□ 0.02
IFT88-202ENST00000351808 CEP112Q8N8E3 955 aa15.19■□□□□ 0.02
IFT88-202ENST00000351808 CDC23Q9UJX2 597 aa15.19■□□□□ 0.02
IFT88-202ENST00000351808 RPS6KB1P23443 525 aa15.19■□□□□ 0.02
IFT88-202ENST00000351808 NDUFA8P51970 172 aa15.19■□□□□ 0.02
IFT88-202ENST00000351808 POTEDQ86YR6 584 aa15.19■□□□□ 0.02
IFT88-202ENST00000351808 TBC1D22AQ8WUA7 517 aa15.19■□□□□ 0.02
IFT88-202ENST00000351808 KAT14Q9H8E8 782 aa15.19■□□□□ 0.02
IFT88-202ENST00000351808 MCM8Q9UJA3 840 aa15.19■□□□□ 0.02
IFT88-202ENST00000351808 H0YHG0 523 aa15.18■□□□□ 0.02
IFT88-202ENST00000351808 ATP2B2Q01814 1243 aa15.18■□□□□ 0.02
IFT88-202ENST00000351808 MTX1Q13505 466 aa15.18■□□□□ 0.02
IFT88-202ENST00000351808 MRPS27Q92552 414 aaKnown RBP15.18■□□□□ 0.02
IFT88-202ENST00000351808 ZKSCAN4Q969J2 545 aaPredicted RBP15.18■□□□□ 0.02
IFT88-202ENST00000351808 MRPL44Q9H9J2 332 aaKnown RBP15.18■□□□□ 0.02
IFT88-202ENST00000351808 LZTFL1Q9NQ48 299 aa15.18■□□□□ 0.02
IFT88-202ENST00000351808 MINK1Q8N4C8 1332 aaPredicted RBP15.18■□□□□ 0.02
IFT88-202ENST00000351808 RDXP35241 583 aaKnown RBP15.18■□□□□ 0.02
IFT88-202ENST00000351808 NLRP12P59046 1061 aa15.18■□□□□ 0.02
IFT88-202ENST00000351808 JMYQ8N9B5 988 aa15.18■□□□□ 0.02
IFT88-202ENST00000351808 GBP3Q9H0R5 595 aa15.18■□□□□ 0.02
IFT88-202ENST00000351808 PCDHA7Q9UN72 937 aa15.18■□□□□ 0.02
IFT88-202ENST00000351808 SETD1AO15047 1707 aaKnown RBP15.18■□□□□ 0.02
IFT88-202ENST00000351808 RPGRIP1LQ68CZ1 1315 aa15.18■□□□□ 0.02
IFT88-202ENST00000351808 IRAK1P51617 712 aa15.18■□□□□ 0.02
IFT88-202ENST00000351808 ADKP55263 362 aaKnown RBP15.18■□□□□ 0.02
IFT88-202ENST00000351808 TACO1Q9BSH4 297 aaKnown RBP15.18■□□□□ 0.02
IFT88-202ENST00000351808 CDHR2Q9BYE9 1310 aa15.18■□□□□ 0.02
IFT88-202ENST00000351808 SLC3A2P08195 630 aaKnown RBP15.17■□□□□ 0.02
IFT88-202ENST00000351808 C11orf91Q3C1V1 193 aa15.17■□□□□ 0.02
IFT88-202ENST00000351808 BCAS4Q8TDM0 211 aa15.17■□□□□ 0.02
IFT88-202ENST00000351808 FANCLQ9NW38 375 aa15.17■□□□□ 0.02
IFT88-202ENST00000351808 ABCA9Q8IUA7 1624 aa15.17■□□□□ 0.02
IFT88-202ENST00000351808 CBFA2T2O43439 604 aa15.17■□□□□ 0.02
IFT88-202ENST00000351808 CALRP27797 417 aaKnown RBP15.17■□□□□ 0.02
IFT88-202ENST00000351808 NF2P35240 595 aa15.17■□□□□ 0.02
IFT88-202ENST00000351808 PPP1R42Q7Z4L9 355 aa15.17■□□□□ 0.02
IFT88-202ENST00000351808 SSH3Q8TE77 659 aa15.17■□□□□ 0.02
IFT88-202ENST00000351808 FAM227BQ96M60 508 aa15.17■□□□□ 0.02
IFT88-202ENST00000351808 SAMM50Q9Y512 469 aa15.17■□□□□ 0.02
IFT88-202ENST00000351808 ANKRD26Q9UPS8 1709 aa15.17■□□□□ 0.02
IFT88-202ENST00000351808 A0A0U1RQJ8 604 aa15.16■□□□□ 0.02
IFT88-202ENST00000351808 SARNPP82979 210 aaKnown RBP15.16■□□□□ 0.02
IFT88-202ENST00000351808 DDR1Q08345 913 aa15.16■□□□□ 0.02
IFT88-202ENST00000351808 MTF1Q14872 753 aa15.16■□□□□ 0.02
IFT88-202ENST00000351808 ATRIPQ8WXE1 791 aa15.16■□□□□ 0.02
IFT88-202ENST00000351808 MAP4K1Q92918 833 aa15.16■□□□□ 0.02
IFT88-202ENST00000351808 RBM28Q9NW13 759 aaKnown RBP15.16■□□□□ 0.02
IFT88-202ENST00000351808 CABP1Q9NZU7 370 aa15.16■□□□□ 0.02
IFT88-202ENST00000351808 CAMSAP1Q5T5Y3 1602 aa15.16■□□□□ 0.02
IFT88-202ENST00000351808 PPFIA3O75145 1194 aa15.16■□□□□ 0.02
IFT88-202ENST00000351808 EFCAB2Q5VUJ9 269 aa15.16■□□□□ 0.02
IFT88-202ENST00000351808 ODF2LQ9ULJ1 636 aa15.16■□□□□ 0.02
IFT88-202ENST00000351808 ABCC3O15438 1527 aa15.16■□□□□ 0.02
IFT88-202ENST00000351808 KIF3CO14782 793 aa15.15■□□□□ 0.02
IFT88-202ENST00000351808 STX10O60499 249 aa15.15■□□□□ 0.02
IFT88-202ENST00000351808 SHOX2O60902 331 aaPredicted RBP15.15■□□□□ 0.02
IFT88-202ENST00000351808 GLRX3O76003 335 aaKnown RBP15.15■□□□□ 0.02
IFT88-202ENST00000351808 INHBEP58166 350 aa15.15■□□□□ 0.02
IFT88-202ENST00000351808 KIF4BQ2VIQ3 1234 aa15.15■□□□□ 0.02
IFT88-202ENST00000351808 HSP90AA4PQ58FG1 418 aa15.15■□□□□ 0.02
IFT88-202ENST00000351808 CALR3Q96L12 384 aaKnown RBP15.15■□□□□ 0.02
IFT88-202ENST00000351808 CHUKO15111 745 aa15.15■□□□□ 0.02
IFT88-202ENST00000351808 UBTFL1P0CB47 393 aaPredicted RBP15.15■□□□□ 0.02
IFT88-202ENST00000351808 GCFC2P16383 781 aaKnown RBP15.15■□□□□ 0.02
IFT88-202ENST00000351808 FNTAP49354 379 aa15.15■□□□□ 0.02
IFT88-202ENST00000351808 AARSP49588 968 aaKnown RBP eCLIP15.15■□□□□ 0.02
IFT88-202ENST00000351808 GUCY1B3Q02153 619 aa15.15■□□□□ 0.02
IFT88-202ENST00000351808 SEMA3FQ13275 785 aa15.15■□□□□ 0.02
IFT88-202ENST00000351808 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.15■□□□□ 0.02
IFT88-202ENST00000351808 TEX11Q8IYF3 940 aa15.15■□□□□ 0.02
IFT88-202ENST00000351808 NOA1Q8NC60 698 aaKnown RBP15.15■□□□□ 0.02
IFT88-202ENST00000351808 NECTIN2Q92692 538 aa15.15■□□□□ 0.02
IFT88-202ENST00000351808 GDAP1L1Q96MZ0 367 aa15.15■□□□□ 0.02
IFT88-202ENST00000351808 ZNF396Q96N95 335 aaPredicted RBP15.15■□□□□ 0.02
IFT88-202ENST00000351808 USP44Q9H0E7 712 aa15.15■□□□□ 0.02
IFT88-202ENST00000351808 NEDD4P46934 1319 aa15.15■□□□□ 0.02
IFT88-202ENST00000351808 IKBKBO14920 756 aa15.14■□□□□ 0.01
IFT88-202ENST00000351808 TC2NQ8N9U0 490 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms