RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TRAPPC3LQ5T215 181 aa8.24□□□□□ -1.09
TRIM55-203ENST00000350034 TPTE2Q6XPS3 522 aa8.24□□□□□ -1.09
TRIM55-203ENST00000350034 DHX32Q7L7V1 743 aaKnown RBP8.24□□□□□ -1.09
TRIM55-203ENST00000350034 FBXL16Q8N461 479 aa8.24□□□□□ -1.09
TRIM55-203ENST00000350034 SPATA5Q8NB90 893 aa8.24□□□□□ -1.09
TRIM55-203ENST00000350034 LARP6Q9BRS8 491 aaKnown RBP8.24□□□□□ -1.09
TRIM55-203ENST00000350034 PUS7LQ9H0K6 701 aaKnown RBP8.24□□□□□ -1.09
TRIM55-203ENST00000350034 LMBRD1Q9NUN5 540 aa8.24□□□□□ -1.09
TRIM55-203ENST00000350034 CTNNA3Q9UI47 895 aa8.24□□□□□ -1.09
TRIM55-203ENST00000350034 MINPP1Q9UNW1 487 aa8.24□□□□□ -1.09
TRIM55-203ENST00000350034 AKAP11Q9UKA4 1901 aa8.24□□□□□ -1.09
TRIM55-203ENST00000350034 WDR33Q9C0J8 1336 aaKnown RBP8.24□□□□□ -1.09
TRIM55-203ENST00000350034 A0A0G2JLW4 131 aa8.23□□□□□ -1.09
TRIM55-203ENST00000350034 FSD2A1L4K1 749 aa8.23□□□□□ -1.09
TRIM55-203ENST00000350034 GOLGA6L22H0YM25 854 aa8.23□□□□□ -1.09
TRIM55-203ENST00000350034 SNAP23O00161 211 aa8.23□□□□□ -1.09
TRIM55-203ENST00000350034 GPAA1O43292 621 aa8.23□□□□□ -1.09
TRIM55-203ENST00000350034 PDIA4P13667 645 aaKnown RBP8.23□□□□□ -1.09
TRIM55-203ENST00000350034 RPS8P62241 208 aaKnown RBP8.23□□□□□ -1.09
TRIM55-203ENST00000350034 NFIXQ14938 502 aa8.23□□□□□ -1.09
TRIM55-203ENST00000350034 R3HDM1Q15032 1099 aaKnown RBP8.23□□□□□ -1.09
TRIM55-203ENST00000350034 ALX1Q15699 326 aa8.23□□□□□ -1.09
TRIM55-203ENST00000350034 WASHC4Q2M389 1173 aa8.23□□□□□ -1.09
TRIM55-203ENST00000350034 BICDL1Q6ZP65 573 aa8.23□□□□□ -1.09
TRIM55-203ENST00000350034 KRT27Q7Z3Y8 459 aa8.23□□□□□ -1.09
TRIM55-203ENST00000350034 NBPF5PQ86XG9 351 aaPredicted RBP8.23□□□□□ -1.09
TRIM55-203ENST00000350034 CCDC83Q8IWF9 413 aa8.23□□□□□ -1.09
TRIM55-203ENST00000350034 CELF1Q92879 486 aaKnown RBP8.23□□□□□ -1.09
TRIM55-203ENST00000350034 NLRP3Q96P20 1036 aa8.23□□□□□ -1.09
TRIM55-203ENST00000350034 SMC3Q9UQE7 1217 aa8.23□□□□□ -1.09
TRIM55-203ENST00000350034 TAF1LQ8IZX4 1826 aa8.23□□□□□ -1.09
TRIM55-203ENST00000350034 E7EWF7 191 aa8.22□□□□□ -1.09
TRIM55-203ENST00000350034 FGAP02671 866 aa8.22□□□□□ -1.09
TRIM55-203ENST00000350034 SYT1P21579 422 aa8.22□□□□□ -1.09
TRIM55-203ENST00000350034 RFC4P35249 363 aa8.22□□□□□ -1.09
TRIM55-203ENST00000350034 BCAMP50895 628 aa8.22□□□□□ -1.09
TRIM55-203ENST00000350034 EVCP57679 992 aa8.22□□□□□ -1.09
TRIM55-203ENST00000350034 KLHL40Q2TBA0 621 aa8.22□□□□□ -1.09
TRIM55-203ENST00000350034 SLC9C2Q5TAH2 1124 aa8.22□□□□□ -1.09
TRIM55-203ENST00000350034 TTLL5Q6EMB2 1281 aa8.22□□□□□ -1.09
TRIM55-203ENST00000350034 FBXO33Q7Z6M2 555 aa8.22□□□□□ -1.09
TRIM55-203ENST00000350034 TCEANC2Q96MN5 208 aa8.22□□□□□ -1.09
TRIM55-203ENST00000350034 STRBPQ96SI9 672 aaKnown RBP8.22□□□□□ -1.09
TRIM55-203ENST00000350034 WWC3Q9ULE0 1092 aa8.22□□□□□ -1.09
TRIM55-203ENST00000350034 ZMYM6O95789 1325 aa8.22□□□□□ -1.09
TRIM55-203ENST00000350034 PDS5AQ29RF7 1337 aaKnown RBP8.22□□□□□ -1.09
TRIM55-203ENST00000350034 WDR19Q8NEZ3 1342 aa8.22□□□□□ -1.09
TRIM55-203ENST00000350034 ZNF532Q9HCE3 1301 aa8.22□□□□□ -1.09
TRIM55-203ENST00000350034 IRS2Q9Y4H2 1338 aa8.22□□□□□ -1.09
TRIM55-203ENST00000350034 CARMIL3Q8ND23 1372 aa8.22□□□□□ -1.09
TRIM55-203ENST00000350034 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.21□□□□□ -1.1
TRIM55-203ENST00000350034 SEMA3EO15041 775 aa8.21□□□□□ -1.1
TRIM55-203ENST00000350034 STX6O43752 255 aa8.21□□□□□ -1.1
TRIM55-203ENST00000350034 PFKFB2O60825 505 aa8.21□□□□□ -1.1
TRIM55-203ENST00000350034 IDH1O75874 414 aaKnown RBP8.21□□□□□ -1.1
TRIM55-203ENST00000350034 ZSCAN22P10073 491 aaPredicted RBP8.21□□□□□ -1.1
TRIM55-203ENST00000350034 HMGB2P26583 209 aaKnown RBP8.21□□□□□ -1.1
TRIM55-203ENST00000350034 GJB2P29033 226 aa8.21□□□□□ -1.1
TRIM55-203ENST00000350034 GTF2E1P29083 439 aaPredicted RBP8.21□□□□□ -1.1
TRIM55-203ENST00000350034 MAP3K12Q12852 859 aa8.21□□□□□ -1.1
TRIM55-203ENST00000350034 MCTP1Q6DN14 999 aa8.21□□□□□ -1.1
TRIM55-203ENST00000350034 Q6ZUG5 572 aa8.21□□□□□ -1.1
TRIM55-203ENST00000350034 MB21D2Q8IYB1 491 aaPredicted RBP8.21□□□□□ -1.1
TRIM55-203ENST00000350034 NECAB1Q8N987 351 aa8.21□□□□□ -1.1
TRIM55-203ENST00000350034 TMEM87AQ8NBN3 555 aa8.21□□□□□ -1.1
TRIM55-203ENST00000350034 GTF3C6Q969F1 213 aa8.21□□□□□ -1.1
TRIM55-203ENST00000350034 FAM84BQ96KN1 310 aaPredicted RBP8.21□□□□□ -1.1
TRIM55-203ENST00000350034 ANKRD2Q9GZV1 360 aa8.21□□□□□ -1.1
TRIM55-203ENST00000350034 MTMR6Q9Y217 621 aa8.21□□□□□ -1.1
TRIM55-203ENST00000350034 PNPLA7Q6ZV29 1317 aa8.21□□□□□ -1.1
TRIM55-203ENST00000350034 C4AP0C0L4 1744 aa8.2□□□□□ -1.1
TRIM55-203ENST00000350034 F13A1P00488 732 aa8.2□□□□□ -1.1
TRIM55-203ENST00000350034 GYS1P13807 737 aa8.2□□□□□ -1.1
TRIM55-203ENST00000350034 C1QBPQ07021 282 aaKnown RBP8.2□□□□□ -1.1
TRIM55-203ENST00000350034 IMMTQ16891 758 aaKnown RBP8.2□□□□□ -1.1
TRIM55-203ENST00000350034 PROM2Q8N271 834 aa8.2□□□□□ -1.1
TRIM55-203ENST00000350034 SMARCC2Q8TAQ2 1214 aa8.2□□□□□ -1.1
TRIM55-203ENST00000350034 CHAMP1Q96JM3 812 aa8.2□□□□□ -1.1
TRIM55-203ENST00000350034 LLPHQ9BRT6 129 aaKnown RBP8.2□□□□□ -1.1
TRIM55-203ENST00000350034 NBPF3Q9H094 633 aa8.2□□□□□ -1.1
TRIM55-203ENST00000350034 GNL3LQ9NVN8 582 aaKnown RBP8.2□□□□□ -1.1
TRIM55-203ENST00000350034 PPP1R1BQ9UD71 204 aaPredicted RBP8.2□□□□□ -1.1
TRIM55-203ENST00000350034 ISY1Q9ULR0 285 aaKnown RBP8.2□□□□□ -1.1
TRIM55-203ENST00000350034 COL1A1P02452 1464 aaPredicted RBP8.19□□□□□ -1.1
TRIM55-203ENST00000350034 WTIPA6NIX2 430 aaPredicted RBP8.19□□□□□ -1.1
TRIM55-203ENST00000350034 PATL2C9JE40 543 aaKnown RBP8.19□□□□□ -1.1
TRIM55-203ENST00000350034 IGSF3O75054 1194 aa8.19□□□□□ -1.1
TRIM55-203ENST00000350034 PRPF40AO75400 957 aaKnown RBP8.19□□□□□ -1.1
TRIM55-203ENST00000350034 PHF14O94880 888 aa8.19□□□□□ -1.1
TRIM55-203ENST00000350034 TRIM37O94972 964 aa8.19□□□□□ -1.1
TRIM55-203ENST00000350034 PDCP20941 246 aa8.19□□□□□ -1.1
TRIM55-203ENST00000350034 GYG1P46976 350 aa8.19□□□□□ -1.1
TRIM55-203ENST00000350034 ANTXR2P58335 489 aa8.19□□□□□ -1.1
TRIM55-203ENST00000350034 GRAPQ13588 217 aa8.19□□□□□ -1.1
TRIM55-203ENST00000350034 CRY2Q49AN0 593 aa8.19□□□□□ -1.1
TRIM55-203ENST00000350034 PRR5LQ6MZQ0 368 aa8.19□□□□□ -1.1
TRIM55-203ENST00000350034 C15orf52Q6ZUT6 534 aaKnown RBP8.19□□□□□ -1.1
TRIM55-203ENST00000350034 MAGEB6Q8N7X4 407 aa8.19□□□□□ -1.1
TRIM55-203ENST00000350034 GRAPLQ8TC17 118 aaPredicted RBP8.19□□□□□ -1.1
TRIM55-203ENST00000350034 BRF1Q92994 677 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms