RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 PREX2Q70Z35 1606 aa10.27□□□□□ -0.77
UBE2D3-204ENST00000349311 M0R082 166 aa10.27□□□□□ -0.77
UBE2D3-204ENST00000349311 NFKBIEO00221 500 aa10.27□□□□□ -0.77
UBE2D3-204ENST00000349311 MARSP56192 900 aaKnown RBP10.27□□□□□ -0.77
UBE2D3-204ENST00000349311 TBC1D8BQ0IIM8 1120 aa10.27□□□□□ -0.77
UBE2D3-204ENST00000349311 C8orf86Q6ZUL3 223 aa10.27□□□□□ -0.77
UBE2D3-204ENST00000349311 HFE2Q6ZVN8 426 aa10.27□□□□□ -0.77
UBE2D3-204ENST00000349311 ZNF417Q8TAU3 575 aa10.27□□□□□ -0.77
UBE2D3-204ENST00000349311 NSUN5Q96P11 429 aaKnown RBP10.27□□□□□ -0.77
UBE2D3-204ENST00000349311 ZNF587Q96SQ5 575 aaPredicted RBP10.27□□□□□ -0.77
UBE2D3-204ENST00000349311 ABCC10Q5T3U5 1492 aa10.27□□□□□ -0.77
UBE2D3-204ENST00000349311 CROCC2H7BZ55 1655 aa10.27□□□□□ -0.77
UBE2D3-204ENST00000349311 GCC2Q8IWJ2 1684 aa10.27□□□□□ -0.77
UBE2D3-204ENST00000349311 CNTNAP5Q8WYK1 1306 aa10.27□□□□□ -0.77
UBE2D3-204ENST00000349311 CDC42BPBQ9Y5S2 1711 aa10.27□□□□□ -0.77
UBE2D3-204ENST00000349311 DNMT1P26358 1616 aaKnown RBP10.26□□□□□ -0.77
UBE2D3-204ENST00000349311 PHF20L1A8MW92 1017 aa10.26□□□□□ -0.77
UBE2D3-204ENST00000349311 PHACTR2O75167 634 aa10.26□□□□□ -0.77
UBE2D3-204ENST00000349311 CPB1P15086 417 aa10.26□□□□□ -0.77
UBE2D3-204ENST00000349311 CES1P23141 567 aa10.26□□□□□ -0.77
UBE2D3-204ENST00000349311 AFF1P51825 1210 aaKnown RBP10.26□□□□□ -0.77
UBE2D3-204ENST00000349311 NIF3L1Q9GZT8 377 aa10.26□□□□□ -0.77
UBE2D3-204ENST00000349311 DNAJC25Q9H1X3 360 aa10.26□□□□□ -0.77
UBE2D3-204ENST00000349311 ADGBQ8N7X0 1667 aa10.25□□□□□ -0.77
UBE2D3-204ENST00000349311 AMPD1P23109 780 aa10.25□□□□□ -0.77
UBE2D3-204ENST00000349311 GSK3AP49840 483 aa10.25□□□□□ -0.77
UBE2D3-204ENST00000349311 FMR1Q06787 632 aaKnown RBP eCLIP10.25□□□□□ -0.77
UBE2D3-204ENST00000349311 ORC1Q13415 861 aa10.25□□□□□ -0.77
UBE2D3-204ENST00000349311 GALNT12Q8IXK2 581 aa10.25□□□□□ -0.77
UBE2D3-204ENST00000349311 TRIM11Q96F44 468 aa10.25□□□□□ -0.77
UBE2D3-204ENST00000349311 USP35Q9P2H5 1018 aa10.25□□□□□ -0.77
UBE2D3-204ENST00000349311 KANSL3Q9P2N6 904 aa10.25□□□□□ -0.77
UBE2D3-204ENST00000349311 MKL2Q9ULH7 1088 aa10.25□□□□□ -0.77
UBE2D3-204ENST00000349311 AKNAQ7Z591 1439 aa10.24□□□□□ -0.77
UBE2D3-204ENST00000349311 PEAR1Q5VY43 1037 aaPredicted RBP10.24□□□□□ -0.77
UBE2D3-204ENST00000349311 BEND7Q8N7W2 519 aaPredicted RBP10.24□□□□□ -0.77
UBE2D3-204ENST00000349311 PLD4Q96BZ4 506 aa10.24□□□□□ -0.77
UBE2D3-204ENST00000349311 SCARF2Q96GP6 870 aaPredicted RBP10.24□□□□□ -0.77
UBE2D3-204ENST00000349311 IPO9Q96P70 1041 aaKnown RBP10.24□□□□□ -0.77
UBE2D3-204ENST00000349311 AMOTL2Q9Y2J4 779 aa10.24□□□□□ -0.77
UBE2D3-204ENST00000349311 WASHC2AQ641Q2 1341 aa10.24□□□□□ -0.77
UBE2D3-204ENST00000349311 RAB3GAP2Q9H2M9 1393 aa10.24□□□□□ -0.77
UBE2D3-204ENST00000349311 SETD5Q9C0A6 1442 aa10.24□□□□□ -0.77
UBE2D3-204ENST00000349311 GPATCH8Q9UKJ3 1502 aaKnown RBP10.23□□□□□ -0.77
UBE2D3-204ENST00000349311 LILRB5O75023 590 aa10.23□□□□□ -0.77
UBE2D3-204ENST00000349311 RGS9O75916 674 aaPredicted RBP10.23□□□□□ -0.77
UBE2D3-204ENST00000349311 USPL1Q5W0Q7 1092 aa10.23□□□□□ -0.77
UBE2D3-204ENST00000349311 ELMSAN1Q6PJG2 1045 aa10.23□□□□□ -0.77
UBE2D3-204ENST00000349311 ZSCAN29Q8IWY8 852 aaPredicted RBP10.23□□□□□ -0.77
UBE2D3-204ENST00000349311 CSRNP1Q96S65 589 aa10.23□□□□□ -0.77
UBE2D3-204ENST00000349311 SMG9Q9H0W8 520 aaKnown RBP10.23□□□□□ -0.77
UBE2D3-204ENST00000349311 DZANK1Q9NVP4 752 aa10.23□□□□□ -0.77
UBE2D3-204ENST00000349311 ARAP3Q8WWN8 1544 aa10.23□□□□□ -0.77
UBE2D3-204ENST00000349311 ZBTB7CA1YPR0 619 aa10.22□□□□□ -0.77
UBE2D3-204ENST00000349311 PLEKHD1A6NEE1 506 aa10.22□□□□□ -0.77
UBE2D3-204ENST00000349311 GNB5O14775 395 aa10.22□□□□□ -0.77
UBE2D3-204ENST00000349311 CPNE3O75131 537 aaKnown RBP10.22□□□□□ -0.77
UBE2D3-204ENST00000349311 GHRHP01286 108 aa10.22□□□□□ -0.77
UBE2D3-204ENST00000349311 ADAMTSL4Q6UY14 1074 aa10.22□□□□□ -0.77
UBE2D3-204ENST00000349311 NUDT8Q8WV74 236 aa10.22□□□□□ -0.77
UBE2D3-204ENST00000349311 CCDC136Q96JN2 1154 aa10.22□□□□□ -0.77
UBE2D3-204ENST00000349311 PBX4Q9BYU1 374 aa10.22□□□□□ -0.77
UBE2D3-204ENST00000349311 JPH1Q9HDC5 661 aaPredicted RBP10.22□□□□□ -0.77
UBE2D3-204ENST00000349311 EIF1AYO14602 144 aaKnown RBP10.21□□□□□ -0.77
UBE2D3-204ENST00000349311 ACPPP15309 386 aa10.21□□□□□ -0.77
UBE2D3-204ENST00000349311 EIF2AK2P19525 551 aaKnown RBP10.21□□□□□ -0.77
UBE2D3-204ENST00000349311 BAG6P46379 1132 aa10.21□□□□□ -0.77
UBE2D3-204ENST00000349311 ATP11AP98196 1134 aa10.21□□□□□ -0.77
UBE2D3-204ENST00000349311 HNRNPUQ00839 825 aaKnown RBP eCLIP10.21□□□□□ -0.77
UBE2D3-204ENST00000349311 KCNMA1Q12791 1236 aa10.21□□□□□ -0.77
UBE2D3-204ENST00000349311 COL19A1Q14993 1142 aa10.21□□□□□ -0.77
UBE2D3-204ENST00000349311 NCAPG2Q86XI2 1143 aa10.21□□□□□ -0.77
UBE2D3-204ENST00000349311 TMC1Q8TDI8 760 aa10.21□□□□□ -0.77
UBE2D3-204ENST00000349311 RASSF4Q9H2L5 321 aa10.21□□□□□ -0.77
UBE2D3-204ENST00000349311 RRAGCQ9HB90 399 aa10.21□□□□□ -0.77
UBE2D3-204ENST00000349311 ARHGEF5Q12774 1597 aa10.21□□□□□ -0.78
UBE2D3-204ENST00000349311 RIMBP3CA6NJZ7 1639 aa10.2□□□□□ -0.78
UBE2D3-204ENST00000349311 RIMBP3BA6NNM3 1639 aa10.2□□□□□ -0.78
UBE2D3-204ENST00000349311 EDN3P14138 238 aa10.2□□□□□ -0.78
UBE2D3-204ENST00000349311 PLCB3Q01970 1234 aa10.2□□□□□ -0.78
UBE2D3-204ENST00000349311 ENOX2Q16206 610 aaKnown RBP10.2□□□□□ -0.78
UBE2D3-204ENST00000349311 TTC37Q6PGP7 1564 aa10.2□□□□□ -0.78
UBE2D3-204ENST00000349311 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.2□□□□□ -0.786e-33■□□□□ 10.7
UBE2D3-204ENST00000349311 RIMBP3Q9UFD9 1639 aa10.2□□□□□ -0.78
UBE2D3-204ENST00000349311 ABCA9Q8IUA7 1624 aa10.19□□□□□ -0.78
UBE2D3-204ENST00000349311 CAMSAP2Q08AD1 1489 aa10.19□□□□□ -0.78
UBE2D3-204ENST00000349311 WASHC2CQ9Y4E1 1318 aa10.19□□□□□ -0.78
UBE2D3-204ENST00000349311 CACTIN-AS1Q8N1I8 211 aa10.19□□□□□ -0.78
UBE2D3-204ENST00000349311 TMEM102Q8N9M5 508 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-204ENST00000349311 SPACA7Q96KW9 195 aa10.19□□□□□ -0.78
UBE2D3-204ENST00000349311 ADAM19Q9H013 955 aa10.19□□□□□ -0.78
UBE2D3-204ENST00000349311 RBSNQ9H1K0 784 aa10.19□□□□□ -0.78
UBE2D3-204ENST00000349311 SUV39H2Q9H5I1 410 aa10.19□□□□□ -0.78
UBE2D3-204ENST00000349311 HFM1A2PYH4 1435 aa10.18□□□□□ -0.78
UBE2D3-204ENST00000349311 PIK3R2O00459 728 aa10.18□□□□□ -0.78
UBE2D3-204ENST00000349311 COL8A1P27658 744 aa10.18□□□□□ -0.78
UBE2D3-204ENST00000349311 CCDC27Q2M243 656 aa10.18□□□□□ -0.78
UBE2D3-204ENST00000349311 KIAA0319Q5VV43 1072 aa10.18□□□□□ -0.78
UBE2D3-204ENST00000349311 MSL1Q68DK7 614 aa10.18□□□□□ -0.78
UBE2D3-204ENST00000349311 PODNQ7Z5L7 613 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 1320.6 ms