RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 AKAP12Q02952 1782 aa20.59■□□□□ 0.89
APP-202ENST00000348990 SYKP43405 635 aa20.59■□□□□ 0.89
APP-202ENST00000348990 ILDR1Q86SU0 546 aaPredicted RBP20.59■□□□□ 0.89
APP-202ENST00000348990 RTEL1Q9NZ71 1219 aa20.59■□□□□ 0.89
APP-202ENST00000348990 CARMIL3Q8ND23 1372 aa20.59■□□□□ 0.89
APP-202ENST00000348990 OAS2P29728 719 aaKnown RBP20.59■□□□□ 0.89
APP-202ENST00000348990 HSP90AB3PQ58FF7 597 aa20.59■□□□□ 0.89
APP-202ENST00000348990 KBTBD3Q8NAB2 608 aa20.59■□□□□ 0.89
APP-202ENST00000348990 DPF2Q92785 391 aa20.59■□□□□ 0.89
APP-202ENST00000348990 CEMIPQ8WUJ3 1361 aa20.59■□□□□ 0.89
APP-202ENST00000348990 PFKFB1P16118 471 aa20.59■□□□□ 0.89
APP-202ENST00000348990 PAG1Q9NWQ8 432 aa20.59■□□□□ 0.89
APP-202ENST00000348990 ZSCAN12O43309 604 aa20.58■□□□□ 0.89
APP-202ENST00000348990 CBFA2T2O43439 604 aa20.58■□□□□ 0.88
APP-202ENST00000348990 ST5P78524 1137 aa20.58■□□□□ 0.88
APP-202ENST00000348990 LMBR1LQ6UX01 489 aa20.58■□□□□ 0.88
APP-202ENST00000348990 ANKRD13DQ6ZTN6 518 aa20.58■□□□□ 0.88
APP-202ENST00000348990 LMAN1P49257 510 aa20.57■□□□□ 0.88
APP-202ENST00000348990 KARSQ15046 597 aaKnown RBP20.57■□□□□ 0.88
APP-202ENST00000348990 RALYLQ86SE5 291 aaKnown RBP20.57■□□□□ 0.88
APP-202ENST00000348990 PTPN12Q05209 780 aaKnown RBP20.57■□□□□ 0.88
APP-202ENST00000348990 MYSM1Q5VVJ2 828 aa20.57■□□□□ 0.88
APP-202ENST00000348990 HSPD1P10809 573 aaKnown RBP20.57■□□□□ 0.88
APP-202ENST00000348990 PNOCQ13519 176 aa20.57■□□□□ 0.88
APP-202ENST00000348990 HAUS7Q99871 368 aa20.57■□□□□ 0.88
APP-202ENST00000348990 ARFGAP3Q9NP61 516 aa20.57■□□□□ 0.88
APP-202ENST00000348990 TMEM232C9JQI7 657 aa20.56■□□□□ 0.88
APP-202ENST00000348990 LRRFIP1Q32MZ4 808 aaKnown RBP20.56■□□□□ 0.88
APP-202ENST00000348990 AMOTQ4VCS5 1084 aa20.56■□□□□ 0.88
APP-202ENST00000348990 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.56■□□□□ 0.88
APP-202ENST00000348990 RICTORQ6R327 1708 aa20.56■□□□□ 0.88
APP-202ENST00000348990 RGPD1P0DJD0 1748 aa20.56■□□□□ 0.88
APP-202ENST00000348990 DHX16O60231 1041 aaKnown RBP20.56■□□□□ 0.88
APP-202ENST00000348990 IFIT1P09914 478 aaKnown RBP20.56■□□□□ 0.88
APP-202ENST00000348990 RXRAP19793 462 aa20.56■□□□□ 0.88
APP-202ENST00000348990 SMC1AQ14683 1233 aaKnown RBP20.56■□□□□ 0.88
APP-202ENST00000348990 CCDC93Q567U6 631 aa20.56■□□□□ 0.88
APP-202ENST00000348990 ANO1Q5XXA6 986 aa20.56■□□□□ 0.88
APP-202ENST00000348990 A0A1W2PQ27 194 aa20.55■□□□□ 0.88
APP-202ENST00000348990 A0A1W2PQ64 194 aa20.55■□□□□ 0.88
APP-202ENST00000348990 A0A1W2PQD8 194 aa20.55■□□□□ 0.88
APP-202ENST00000348990 FDPSP14324 419 aaKnown RBP20.55■□□□□ 0.88
APP-202ENST00000348990 ESCO1Q5FWF5 840 aa20.55■□□□□ 0.88
APP-202ENST00000348990 CHMP4CQ96CF2 233 aa20.55■□□□□ 0.88
APP-202ENST00000348990 MYL5Q02045 173 aa20.55■□□□□ 0.88
APP-202ENST00000348990 SMARCE1Q969G3 411 aa20.55■□□□□ 0.88
APP-202ENST00000348990 FANCLQ9NW38 375 aa20.55■□□□□ 0.88
APP-202ENST00000348990 CACNA1FO60840 1977 aa20.55■□□□□ 0.88
APP-202ENST00000348990 SRRTQ9BXP5 876 aaKnown RBP20.55■□□□□ 0.88
APP-202ENST00000348990 PHF8Q9UPP1 1060 aa20.55■□□□□ 0.88
APP-202ENST00000348990 TPM1P09493 284 aa20.54■□□□□ 0.88
APP-202ENST00000348990 DHX8Q14562 1220 aaKnown RBP20.54■□□□□ 0.88
APP-202ENST00000348990 TXLNBQ8N3L3 684 aa20.54■□□□□ 0.88
APP-202ENST00000348990 COPRSQ9NQ92 184 aa20.54■□□□□ 0.88
APP-202ENST00000348990 ATP2B1P20020 1258 aa20.54■□□□□ 0.88
APP-202ENST00000348990 ADKP55263 362 aaKnown RBP20.54■□□□□ 0.88
APP-202ENST00000348990 PPP2R3AQ06190 1150 aa20.54■□□□□ 0.88
APP-202ENST00000348990 MCM6Q14566 821 aa20.54■□□□□ 0.88
APP-202ENST00000348990 DESI2Q9BSY9 194 aa20.54■□□□□ 0.88
APP-202ENST00000348990 FAM53CQ9NYF3 392 aa20.54■□□□□ 0.88
APP-202ENST00000348990 ADAMTS13Q76LX8 1427 aa20.54■□□□□ 0.88
APP-202ENST00000348990 EFCAB8A8MWE9 144 aa20.54■□□□□ 0.88
APP-202ENST00000348990 PRC1O43663 620 aa20.54■□□□□ 0.88
APP-202ENST00000348990 SPECC1Q5M775 1068 aa20.54■□□□□ 0.88
APP-202ENST00000348990 C10orf67Q8IYJ2 551 aa20.54■□□□□ 0.88
APP-202ENST00000348990 CCDC191Q8NCU4 936 aa20.54■□□□□ 0.88
APP-202ENST00000348990 CCDC12Q8WUD4 166 aaPredicted RBP20.54■□□□□ 0.88
APP-202ENST00000348990 ZNF274Q96GC6 653 aaPredicted RBP20.54■□□□□ 0.88
APP-202ENST00000348990 PPP2R2CQ9Y2T4 447 aa20.54■□□□□ 0.88
APP-202ENST00000348990 TADA3O75528 432 aa20.53■□□□□ 0.88
APP-202ENST00000348990 TUBB4AP04350 444 aa20.53■□□□□ 0.88
APP-202ENST00000348990 KCNA6P17658 529 aa20.53■□□□□ 0.88
APP-202ENST00000348990 FBXO18Q8NFZ0 1043 aa20.53■□□□□ 0.88
APP-202ENST00000348990 CPLX3Q8WVH0 158 aa20.53■□□□□ 0.88
APP-202ENST00000348990 METTL22Q9BUU2 404 aaPredicted RBP20.53■□□□□ 0.88
APP-202ENST00000348990 NRXN3Q9Y4C0 1643 aa20.53■□□□□ 0.88
APP-202ENST00000348990 CAPN2P17655 700 aa20.53■□□□□ 0.88
APP-202ENST00000348990 EXOSC10Q01780 885 aaKnown RBP20.53■□□□□ 0.88
APP-202ENST00000348990 RAD51AP2Q09MP3 1159 aa20.53■□□□□ 0.88
APP-202ENST00000348990 NCAPHQ15003 741 aa20.53■□□□□ 0.88
APP-202ENST00000348990 CNNM3Q8NE01 707 aa20.53■□□□□ 0.88
APP-202ENST00000348990 AIFM3Q96NN9 605 aa20.53■□□□□ 0.88
APP-202ENST00000348990 CLIC6Q96NY7 704 aa20.53■□□□□ 0.88
APP-202ENST00000348990 PHLPP2Q6ZVD8 1323 aa20.53■□□□□ 0.88
APP-202ENST00000348990 YEATS4O95619 227 aa20.52■□□□□ 0.88
APP-202ENST00000348990 CCDC85AQ96PX6 553 aaPredicted RBP20.52■□□□□ 0.88
APP-202ENST00000348990 BAG1Q99933 345 aaPredicted RBP20.52■□□□□ 0.88
APP-202ENST00000348990 IMMTQ16891 758 aaKnown RBP20.52■□□□□ 0.88
APP-202ENST00000348990 TTC5Q8N0Z6 440 aa20.52■□□□□ 0.88
APP-202ENST00000348990 NFATC2IPQ8NCF5 419 aa20.52■□□□□ 0.88
APP-202ENST00000348990 AK7Q96M32 723 aa20.52■□□□□ 0.88
APP-202ENST00000348990 WDR24Q96S15 920 aa20.52■□□□□ 0.88
APP-202ENST00000348990 APPP05067 770 aa20.52■□□□□ 0.88
APP-202ENST00000348990 CREBRFQ8IUR6 639 aa20.52■□□□□ 0.88
APP-202ENST00000348990 PUF60Q9UHX1 559 aaKnown RBP20.52■□□□□ 0.88
APP-202ENST00000348990 ZNF330Q9Y3S2 320 aaPredicted RBP20.51■□□□□ 0.87
APP-202ENST00000348990 PTPRUQ92729 1446 aa20.51■□□□□ 0.87
APP-202ENST00000348990 SKIDA1Q1XH10 827 aa20.51■□□□□ 0.87
APP-202ENST00000348990 LZTFL1Q9NQ48 299 aa20.51■□□□□ 0.87
APP-202ENST00000348990 HELLSQ9NRZ9 838 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms