RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 CTAGE1Q96RT6 745 aa17.59■□□□□ 0.41
PTPRO-202ENST00000348962 A0A1B0GUL7 405 aa17.58■□□□□ 0.41
PTPRO-202ENST00000348962 ISM2Q6H9L7 571 aa17.58■□□□□ 0.41
PTPRO-202ENST00000348962 ZNF408Q9H9D4 720 aa17.58■□□□□ 0.41
PTPRO-202ENST00000348962 RBM28Q9NW13 759 aaKnown RBP17.58■□□□□ 0.41
PTPRO-202ENST00000348962 IVNS1ABPQ9Y6Y0 642 aa17.58■□□□□ 0.41
PTPRO-202ENST00000348962 ALDH1B1P30837 517 aa17.58■□□□□ 0.41
PTPRO-202ENST00000348962 FAM13AO94988 1023 aa17.58■□□□□ 0.4
PTPRO-202ENST00000348962 DNAJC10Q8IXB1 793 aa17.58■□□□□ 0.4
PTPRO-202ENST00000348962 BRPF3Q9ULD4 1205 aa17.58■□□□□ 0.4
PTPRO-202ENST00000348962 KRT2P35908 639 aa17.58■□□□□ 0.4
PTPRO-202ENST00000348962 TMCO3Q6UWJ1 677 aa17.58■□□□□ 0.4
PTPRO-202ENST00000348962 ADAMTS12P58397 1594 aa17.58■□□□□ 0.4
PTPRO-202ENST00000348962 A1BGP04217 495 aa17.57■□□□□ 0.4
PTPRO-202ENST00000348962 LRRC45Q96CN5 670 aa17.57■□□□□ 0.4
PTPRO-202ENST00000348962 HELLSQ9NRZ9 838 aa17.57■□□□□ 0.4
PTPRO-202ENST00000348962 USP25Q9UHP3 1055 aa17.57■□□□□ 0.4
PTPRO-202ENST00000348962 PIK3C2GO75747 1445 aa17.57■□□□□ 0.4
PTPRO-202ENST00000348962 PABPN1LA6NDY0 278 aaKnown RBP17.57■□□□□ 0.4
PTPRO-202ENST00000348962 GOPCQ9HD26 462 aa17.57■□□□□ 0.4
PTPRO-202ENST00000348962 APBB1IPQ7Z5R6 666 aaPredicted RBP17.56■□□□□ 0.4
PTPRO-202ENST00000348962 GCOM1H8Y6P7 765 aaPredicted RBP17.56■□□□□ 0.4
PTPRO-202ENST00000348962 ECM2O94769 699 aaPredicted RBP17.56■□□□□ 0.4
PTPRO-202ENST00000348962 MYZAPP0CAP1 466 aa17.56■□□□□ 0.4
PTPRO-202ENST00000348962 EHBP1Q8NDI1 1231 aa17.56■□□□□ 0.4
PTPRO-202ENST00000348962 TIMM10P62072 90 aa17.56■□□□□ 0.4
PTPRO-202ENST00000348962 SPECC1Q5M775 1068 aa17.56■□□□□ 0.4
PTPRO-202ENST00000348962 NIM1KQ8IY84 436 aa17.56■□□□□ 0.4
PTPRO-202ENST00000348962 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.56■□□□□ 0.4
PTPRO-202ENST00000348962 TMEM2Q9UHN6 1383 aa17.56■□□□□ 0.4
PTPRO-202ENST00000348962 IL13P35225 146 aa17.55■□□□□ 0.4
PTPRO-202ENST00000348962 NOD1Q9Y239 953 aa17.55■□□□□ 0.4
PTPRO-202ENST00000348962 ERVV-2B6SEH9 535 aa17.55■□□□□ 0.4
PTPRO-202ENST00000348962 CREB3L3Q68CJ9 461 aa17.55■□□□□ 0.4
PTPRO-202ENST00000348962 MARCKSP29966 332 aaPredicted RBP17.55■□□□□ 0.4
PTPRO-202ENST00000348962 HLTFQ14527 1009 aaKnown RBP eCLIP17.55■□□□□ 0.4
PTPRO-202ENST00000348962 SPTLC2O15270 562 aa17.54■□□□□ 0.4
PTPRO-202ENST00000348962 TBC1D22AQ8WUA7 517 aa17.54■□□□□ 0.4
PTPRO-202ENST00000348962 PLEKHG3A1L390 1219 aa17.54■□□□□ 0.4
PTPRO-202ENST00000348962 DTHD1Q6ZMT9 781 aa17.54■□□□□ 0.4
PTPRO-202ENST00000348962 LPIN2Q92539 896 aa17.54■□□□□ 0.4
PTPRO-202ENST00000348962 GLT8D2Q9H1C3 349 aa17.54■□□□□ 0.4
PTPRO-202ENST00000348962 SAP30BPQ9UHR5 308 aaKnown RBP17.54■□□□□ 0.4
PTPRO-202ENST00000348962 PDCL2Q8N4E4 241 aa17.54■□□□□ 0.4
PTPRO-202ENST00000348962 SP4Q02446 784 aa17.53■□□□□ 0.4
PTPRO-202ENST00000348962 LGR6Q9HBX8 967 aa17.53■□□□□ 0.4
PTPRO-202ENST00000348962 TCOF1Q13428 1488 aaKnown RBP17.53■□□□□ 0.4
PTPRO-202ENST00000348962 CYLC1P35663 651 aaPredicted RBP17.53■□□□□ 0.4
PTPRO-202ENST00000348962 CHST3Q7LGC8 479 aa17.53■□□□□ 0.4
PTPRO-202ENST00000348962 GPHNQ9NQX3 736 aaPredicted RBP17.53■□□□□ 0.4
PTPRO-202ENST00000348962 TAF12Q16514 161 aa17.53■□□□□ 0.4
PTPRO-202ENST00000348962 DHX58Q96C10 678 aa17.53■□□□□ 0.4
PTPRO-202ENST00000348962 MAP2K1Q02750 393 aaPredicted RBP17.53■□□□□ 0.4
PTPRO-202ENST00000348962 APOBRQ0VD83 1088 aa17.52■□□□□ 0.4
PTPRO-202ENST00000348962 TNNI3KQ59H18 835 aa17.52■□□□□ 0.4
PTPRO-202ENST00000348962 ZBTB21Q9ULJ3 1066 aa17.52■□□□□ 0.4
PTPRO-202ENST00000348962 SSX2IPQ9Y2D8 614 aa17.52■□□□□ 0.4
PTPRO-202ENST00000348962 FPGT-TNNI3KV9GXZ4 949 aa17.52■□□□□ 0.4
PTPRO-202ENST00000348962 BRAPQ7Z569 592 aa17.52■□□□□ 0.4
PTPRO-202ENST00000348962 XAGE2Q96GT9 111 aa17.52■□□□□ 0.4
PTPRO-202ENST00000348962 ZBTB40Q9NUA8 1239 aa17.52■□□□□ 0.4
PTPRO-202ENST00000348962 FSD2A1L4K1 749 aa17.52■□□□□ 0.39
PTPRO-202ENST00000348962 H7C1D1 291 aa17.52■□□□□ 0.39
PTPRO-202ENST00000348962 LMAN1P49257 510 aa17.52■□□□□ 0.39
PTPRO-202ENST00000348962 UBASH3AP57075 661 aa17.52■□□□□ 0.39
PTPRO-202ENST00000348962 MRVI1Q9Y6F6 885 aa17.52■□□□□ 0.39
PTPRO-202ENST00000348962 UQCRHLA0A096LP55 91 aa17.52■□□□□ 0.39
PTPRO-202ENST00000348962 UQCRHP07919 91 aa17.52■□□□□ 0.39
PTPRO-202ENST00000348962 KIAA0753Q2KHM9 967 aa17.52■□□□□ 0.39
PTPRO-202ENST00000348962 ZNF354CQ86Y25 554 aa17.52■□□□□ 0.39
PTPRO-202ENST00000348962 APPBP2Q92624 585 aa17.52■□□□□ 0.39
PTPRO-202ENST00000348962 FAM212AQ96EL1 285 aa17.52■□□□□ 0.39
PTPRO-202ENST00000348962 ZNF496Q96IT1 587 aaPredicted RBP17.52■□□□□ 0.39
PTPRO-202ENST00000348962 TMEM87BQ96K49 555 aa17.52■□□□□ 0.39
PTPRO-202ENST00000348962 WDR62O43379 1518 aa17.51■□□□□ 0.39
PTPRO-202ENST00000348962 DLGAP5Q15398 846 aa17.51■□□□□ 0.39
PTPRO-202ENST00000348962 LRSAM1Q6UWE0 723 aa17.51■□□□□ 0.39
PTPRO-202ENST00000348962 DDX17Q92841 729 aaKnown RBP17.51■□□□□ 0.39
PTPRO-202ENST00000348962 TTC12Q9H892 705 aaPredicted RBP17.51■□□□□ 0.39
PTPRO-202ENST00000348962 TRMT1Q9NXH9 659 aaKnown RBP17.51■□□□□ 0.39
PTPRO-202ENST00000348962 CHL1O00533 1208 aa17.51■□□□□ 0.39
PTPRO-202ENST00000348962 PRPHP41219 470 aa17.51■□□□□ 0.39
PTPRO-202ENST00000348962 UVSSAQ2YD98 709 aa17.51■□□□□ 0.39
PTPRO-202ENST00000348962 MSANTD4Q8NCY6 345 aa17.51■□□□□ 0.39
PTPRO-202ENST00000348962 GOLGA6L10A0A0M3HER8 536 aa17.51■□□□□ 0.39
PTPRO-202ENST00000348962 BICDL2A1A5D9 508 aa17.51■□□□□ 0.39
PTPRO-202ENST00000348962 MCM7P33993 719 aa17.51■□□□□ 0.39
PTPRO-202ENST00000348962 DDX12PQ92771 950 aa17.51■□□□□ 0.39
PTPRO-202ENST00000348962 SMC1AQ14683 1233 aaKnown RBP17.51■□□□□ 0.39
PTPRO-202ENST00000348962 G2E3Q7L622 706 aa17.51■□□□□ 0.39
PTPRO-202ENST00000348962 GPCPD1Q9NPB8 672 aa17.51■□□□□ 0.39
PTPRO-202ENST00000348962 COL17A1Q9UMD9 1497 aaPredicted RBP17.51■□□□□ 0.39
PTPRO-202ENST00000348962 GPR162Q16538 588 aa17.5■□□□□ 0.39
PTPRO-202ENST00000348962 KLHL40Q2TBA0 621 aa17.5■□□□□ 0.39
PTPRO-202ENST00000348962 IQUBQ8NA54 791 aa17.5■□□□□ 0.39
PTPRO-202ENST00000348962 JADE2Q9NQC1 790 aa17.5■□□□□ 0.39
PTPRO-202ENST00000348962 PTPDC1A2A3K4 754 aa17.5■□□□□ 0.39
PTPRO-202ENST00000348962 DKC1O60832 514 aaKnown RBP eCLIP17.5■□□□□ 0.39
PTPRO-202ENST00000348962 STAMBPO95630 424 aa17.5■□□□□ 0.39
PTPRO-202ENST00000348962 RBM10P98175 930 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms