RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 UQCRFS1P1P0C7P4 283 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 RAD51AP2Q09MP3 1159 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 MAP7Q14244 749 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 TUBB8Q3ZCM7 444 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 CALML4Q96GE6 196 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 MYO1CO00159 1063 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 GRM8O00222 908 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 TOM1O60784 492 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 MTIF2P46199 727 aaKnown RBP12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 SESN3P58005 492 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 CCDC178Q5BJE1 867 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 BMP2KLQ5H9B9 411 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 CTNNBL1Q8WYA6 563 aaPredicted RBP12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 SAAL1Q96ER3 474 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 TERF2Q15554 542 aa12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 CWF19L2Q2TBE0 894 aaKnown RBP12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 RMDN2Q96LZ7 410 aa12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 GCOM1H8Y6P7 765 aaPredicted RBP12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 MYO1BO43795 1136 aa12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 MYZAPP0CAP1 466 aa12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 TRIM21P19474 475 aaKnown RBP12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 JPH2Q9BR39 696 aaPredicted RBP12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 TCP11L1Q9NUJ3 509 aa12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 ATP10BO94823 1461 aa12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 A0A087WUV0 522 aaPredicted RBP12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 WTAPQ15007 396 aa12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 SATB2Q9UPW6 733 aa12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 A2MP01023 1474 aa12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 SPATS2Q86XZ4 545 aaKnown RBP12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 TSC1Q92574 1164 aa12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 SBNO2Q9Y2G9 1366 aa12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 IL16Q14005 1332 aa12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 LRRD1A4D1F6 860 aa12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 NUCB1Q02818 461 aa12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 MRPL50Q8N5N7 158 aaKnown RBP12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 GBP7Q8N8V2 638 aaPredicted RBP12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 NLRP3Q96P20 1036 aa12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 GBP5Q96PP8 586 aa12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 KIF2CQ99661 725 aa12.54□□□□□ -0.4
SMARCE1-202ENST00000348513 RBM26Q5T8P6 1007 aaKnown RBP12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 USP6NLQ92738 828 aa12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 RIMBP2O15034 1052 aa12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 CCDC12Q8WUD4 166 aaPredicted RBP12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 TBC1D32Q96NH3 1257 aa12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 UTP14AQ9BVJ6 771 aaKnown RBP12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 POLKQ9UBT6 870 aa12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 PCDHB15Q9Y5E8 787 aa12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 IL2RBP14784 551 aa12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 GSTO1P78417 241 aa12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 IFIT1BQ5T764 474 aaKnown RBP12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 SLC9C2Q5TAH2 1124 aa12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 CCDC113Q9H0I3 377 aa12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 DONSONQ9NYP3 566 aa12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 PLCH2O75038 1416 aa12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 KSR2Q6VAB6 950 aa12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 CCDC186Q7Z3E2 898 aa12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 HEATR3Q7Z4Q2 680 aa12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 TSPYL6Q8N831 410 aa12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 MAP3K1Q13233 1512 aa12.53□□□□□ -0.4
SMARCE1-202ENST00000348513 SKILP12757 684 aa12.52□□□□□ -0.4
SMARCE1-202ENST00000348513 LIG3P49916 1009 aa12.52□□□□□ -0.4
SMARCE1-202ENST00000348513 CHST3Q7LGC8 479 aa12.52□□□□□ -0.4
SMARCE1-202ENST00000348513 SYCP3Q8IZU3 236 aa12.52□□□□□ -0.4
SMARCE1-202ENST00000348513 ASXL1Q8IXJ9 1541 aa12.52□□□□□ -0.4
SMARCE1-202ENST00000348513 TMC6Q7Z403 805 aa12.52□□□□□ -0.4
SMARCE1-202ENST00000348513 CCDC65Q8IXS2 484 aa12.52□□□□□ -0.4
SMARCE1-202ENST00000348513 PTPRKQ15262 1439 aa12.52□□□□□ -0.4
SMARCE1-202ENST00000348513 UBA7P41226 1012 aa12.52□□□□□ -0.41
SMARCE1-202ENST00000348513 IFFO1Q0D2I5 559 aa12.52□□□□□ -0.41
SMARCE1-202ENST00000348513 NAA16Q6N069 864 aaPredicted RBP12.52□□□□□ -0.41
SMARCE1-202ENST00000348513 MAATS1Q7Z4T9 603 aa12.52□□□□□ -0.41
SMARCE1-202ENST00000348513 MIGA1Q8NAN2 632 aa12.52□□□□□ -0.41
SMARCE1-202ENST00000348513 CHCHD3Q9NX63 227 aaKnown RBP12.52□□□□□ -0.41
SMARCE1-202ENST00000348513 HSP90AA4PQ58FG1 418 aa12.52□□□□□ -0.41
SMARCE1-202ENST00000348513 DNAI1Q9UI46 699 aa12.52□□□□□ -0.41
SMARCE1-202ENST00000348513 RBM8AQ9Y5S9 174 aaKnown RBP12.52□□□□□ -0.41
SMARCE1-202ENST00000348513 PPFIBP2Q8ND30 876 aa12.52□□□□□ -0.41
SMARCE1-202ENST00000348513 CABS1Q96KC9 395 aa12.52□□□□□ -0.41
SMARCE1-202ENST00000348513 TFCP2L1Q9NZI6 479 aa12.52□□□□□ -0.41
SMARCE1-202ENST00000348513 PDE1AP54750 535 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 CACNA2D3Q8IZS8 1091 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 DUOX2Q9NRD8 1548 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 CTAGE5O15320 804 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 AFMP43652 599 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 SLMAPQ14BN4 828 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 ACRBPQ8NEB7 543 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 TRAPPC8Q9Y2L5 1435 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 CTAGE15A4D2H0 777 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 FGFR1OPO95684 399 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 CTAGE8P0CG41 777 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 CTAGE6Q86UF2 777 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 CTAGE4Q8IX94 777 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 HMG20BQ9P0W2 317 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 PUF60Q9UHX1 559 aaKnown RBP12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 RIPOR2Q9Y4F9 1068 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 ZBTB43O43298 467 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 TUBBP07437 444 aa12.51□□□□□ -0.41
SMARCE1-202ENST00000348513 PSMC4P43686 418 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms