RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SRCAPQ6ZRS2 3230 aa32.85■■■□□ 2.85
SSBP4-202ENST00000348495 NFKBIEO00221 500 aa32.85■■■□□ 2.85
SSBP4-202ENST00000348495 CDC45O75419 566 aa32.85■■■□□ 2.85
SSBP4-202ENST00000348495 TAOK3Q9H2K8 898 aa32.84■■■□□ 2.85
SSBP4-202ENST00000348495 FRAT2O75474 233 aaPredicted RBP32.83■■■□□ 2.85
SSBP4-202ENST00000348495 TTF1Q15361 905 aaPredicted RBP32.83■■■□□ 2.85
SSBP4-202ENST00000348495 AOC3Q16853 763 aa32.83■■■□□ 2.85
SSBP4-202ENST00000348495 TICAM2Q86XR7 235 aa32.83■■■□□ 2.85
SSBP4-202ENST00000348495 PIH1D3Q9NQM4 214 aaKnown RBP32.83■■■□□ 2.85
SSBP4-202ENST00000348495 LTBP3Q9NS15 1303 aa32.83■■■□□ 2.85
SSBP4-202ENST00000348495 RFX7Q2KHR2 1363 aa32.83■■■□□ 2.85
SSBP4-202ENST00000348495 TBC1D9Q6ZT07 1266 aa32.82■■■□□ 2.85
SSBP4-202ENST00000348495 FSD1Q9BTV5 496 aa32.82■■■□□ 2.85
SSBP4-202ENST00000348495 ZNF277Q9NRM2 450 aaPredicted RBP32.82■■■□□ 2.85
SSBP4-202ENST00000348495 CHD4Q14839 1912 aa32.82■■■□□ 2.85
SSBP4-202ENST00000348495 PPIP5K2O43314 1243 aa32.82■■■□□ 2.84
SSBP4-202ENST00000348495 DOK7Q18PE1 504 aa32.82■■■□□ 2.84
SSBP4-202ENST00000348495 DOCK2Q92608 1830 aa32.81■■■□□ 2.84
SSBP4-202ENST00000348495 CHMLP26374 656 aa32.81■■■□□ 2.84
SSBP4-202ENST00000348495 PODNQ7Z5L7 613 aa32.81■■■□□ 2.84
SSBP4-202ENST00000348495 DBNDD1Q9H9R9 158 aa32.8■■■□□ 2.84
SSBP4-202ENST00000348495 COL4A5P29400 1685 aa32.79■■■□□ 2.84
SSBP4-202ENST00000348495 FAM205AQ6ZU69 1335 aa32.79■■■□□ 2.84
SSBP4-202ENST00000348495 SALL1Q9NSC2 1324 aa32.79■■■□□ 2.84
SSBP4-202ENST00000348495 MYO5AQ9Y4I1 1855 aaKnown RBP32.79■■■□□ 2.84
SSBP4-202ENST00000348495 IARSP41252 1262 aaKnown RBP32.78■■■□□ 2.84
SSBP4-202ENST00000348495 CHAF1AQ13111 956 aaPredicted RBP32.78■■■□□ 2.84
SSBP4-202ENST00000348495 ECE2O60344 883 aa32.77■■■□□ 2.84
SSBP4-202ENST00000348495 WDR66Q8TBY9 1149 aa32.77■■■□□ 2.84
SSBP4-202ENST00000348495 BACH2Q9BYV9 841 aa32.77■■■□□ 2.84
SSBP4-202ENST00000348495 G3V3G9 751 aa32.76■■■□□ 2.83
SSBP4-202ENST00000348495 DCAF8Q5TAQ9 597 aa32.76■■■□□ 2.83
SSBP4-202ENST00000348495 LARGE2Q8N3Y3 721 aa32.76■■■□□ 2.83
SSBP4-202ENST00000348495 JAG2Q9Y219 1238 aa32.76■■■□□ 2.83
SSBP4-202ENST00000348495 HIP1O00291 1037 aa32.75■■■□□ 2.83
SSBP4-202ENST00000348495 MYH7P12883 1935 aa32.75■■■□□ 2.83
SSBP4-202ENST00000348495 YBX3P16989 372 aaKnown RBP eCLIP32.74■■■□□ 2.833e-6■■□□□ 12.9
SSBP4-202ENST00000348495 SCN9AQ15858 1988 aa32.74■■■□□ 2.83
SSBP4-202ENST00000348495 CHGBP05060 677 aa32.74■■■□□ 2.83
SSBP4-202ENST00000348495 CASC1Q6TDU7 716 aa32.74■■■□□ 2.83
SSBP4-202ENST00000348495 IDH1O75874 414 aaKnown RBP32.73■■■□□ 2.83
SSBP4-202ENST00000348495 PRELPP51888 382 aa32.73■■■□□ 2.83
SSBP4-202ENST00000348495 GTF2IP78347 998 aa32.73■■■□□ 2.83
SSBP4-202ENST00000348495 RASSF7Q02833 373 aa32.73■■■□□ 2.83
SSBP4-202ENST00000348495 DDX24Q9GZR7 859 aaKnown RBP eCLIP32.73■■■□□ 2.836e-8■■■■■ 34.3
SSBP4-202ENST00000348495 DIAPH3Q9NSV4 1193 aa32.73■■■□□ 2.83
SSBP4-202ENST00000348495 ABCF2Q9UG63 623 aa32.73■■■□□ 2.83
SSBP4-202ENST00000348495 ZNF646O15015 1829 aaPredicted RBP32.73■■■□□ 2.83
SSBP4-202ENST00000348495 RNF113AO15541 343 aaKnown RBP32.72■■■□□ 2.83
SSBP4-202ENST00000348495 LRRFIP1Q32MZ4 808 aaKnown RBP32.72■■■□□ 2.83
SSBP4-202ENST00000348495 ZGPATQ8N5A5 531 aaKnown RBP32.72■■■□□ 2.83
SSBP4-202ENST00000348495 KCNQ5Q9NR82 932 aa32.72■■■□□ 2.83
SSBP4-202ENST00000348495 YDJCA8MPS7 323 aa32.71■■■□□ 2.83
SSBP4-202ENST00000348495 MAP3K12Q12852 859 aa32.71■■■□□ 2.83
SSBP4-202ENST00000348495 TBC1D22AQ8WUA7 517 aa32.71■■■□□ 2.83
SSBP4-202ENST00000348495 LRP2BPQ9P2M1 347 aa32.71■■■□□ 2.83
SSBP4-202ENST00000348495 ZFYP08048 801 aaPredicted RBP32.71■■■□□ 2.83
SSBP4-202ENST00000348495 TTLL5Q6EMB2 1281 aa32.71■■■□□ 2.83
SSBP4-202ENST00000348495 IGSF3O75054 1194 aa32.7■■■□□ 2.83
SSBP4-202ENST00000348495 ADD2P35612 726 aa32.7■■■□□ 2.83
SSBP4-202ENST00000348495 NMIQ13287 307 aaPredicted RBP32.7■■■□□ 2.83
SSBP4-202ENST00000348495 SLC9C2Q5TAH2 1124 aa32.7■■■□□ 2.83
SSBP4-202ENST00000348495 FAM227BQ96M60 508 aa32.7■■■□□ 2.83
SSBP4-202ENST00000348495 PDE6AP16499 860 aa32.69■■■□□ 2.82
SSBP4-202ENST00000348495 ZSCAN25Q6NSZ9 544 aa32.69■■■□□ 2.82
SSBP4-202ENST00000348495 CWC27Q6UX04 472 aaKnown RBP32.69■■■□□ 2.82
SSBP4-202ENST00000348495 ARHGAP27Q6ZUM4 889 aa32.69■■■□□ 2.82
SSBP4-202ENST00000348495 ESYT1Q9BSJ8 1104 aa32.69■■■□□ 2.82
SSBP4-202ENST00000348495 PSME4Q14997 1843 aa32.69■■■□□ 2.82
SSBP4-202ENST00000348495 A0A0D9SFI3 127 aa32.68■■■□□ 2.82
SSBP4-202ENST00000348495 PRDX5P30044 214 aa32.68■■■□□ 2.82
SSBP4-202ENST00000348495 UBE3CQ15386 1083 aa32.68■■■□□ 2.82
SSBP4-202ENST00000348495 SLFNL1Q499Z3 407 aa32.68■■■□□ 2.82
SSBP4-202ENST00000348495 MFSD14BQ5SR56 506 aa32.68■■■□□ 2.82
SSBP4-202ENST00000348495 ZMYM1Q5SVZ6 1142 aa32.68■■■□□ 2.82
SSBP4-202ENST00000348495 STRIP1Q5VSL9 837 aa32.68■■■□□ 2.82
SSBP4-202ENST00000348495 NIM1KQ8IY84 436 aa32.68■■■□□ 2.82
SSBP4-202ENST00000348495 IL25Q9H293 177 aa32.68■■■□□ 2.82
SSBP4-202ENST00000348495 TCRBV5S4A2TA0A5A2 114 aa32.68■■■□□ 2.82
SSBP4-202ENST00000348495 SEC24BO95487 1268 aa32.68■■■□□ 2.82
SSBP4-202ENST00000348495 SPTY2D1Q68D10 685 aaPredicted RBP32.68■■■□□ 2.82
SSBP4-202ENST00000348495 ERICH6Q7L0X2 663 aa32.68■■■□□ 2.82
SSBP4-202ENST00000348495 ZNRF3Q9ULT6 936 aa32.68■■■□□ 2.82
SSBP4-202ENST00000348495 GRIK5Q16478 980 aa32.67■■■□□ 2.82
SSBP4-202ENST00000348495 ZNF384Q8TF68 577 aa32.67■■■□□ 2.82
SSBP4-202ENST00000348495 RAI14Q9P0K7 980 aa32.67■■■□□ 2.82
SSBP4-202ENST00000348495 MAST2Q6P0Q8 1798 aa32.66■■■□□ 2.82
SSBP4-202ENST00000348495 USP17L3A6NCW0 530 aa32.66■■■□□ 2.82
SSBP4-202ENST00000348495 USP17L4A6NCW7 530 aa32.66■■■□□ 2.82
SSBP4-202ENST00000348495 SGSM2O43147 1006 aa32.66■■■□□ 2.82
SSBP4-202ENST00000348495 FKBP1AP62942 108 aaKnown RBP32.66■■■□□ 2.82
SSBP4-202ENST00000348495 DACT2Q5SW24 774 aa32.66■■■□□ 2.82
SSBP4-202ENST00000348495 USP17L1Q7RTZ2 530 aa32.66■■■□□ 2.82
SSBP4-202ENST00000348495 CERS5Q8N5B7 392 aa32.66■■■□□ 2.82
SSBP4-202ENST00000348495 MAGEB6Q8N7X4 407 aa32.66■■■□□ 2.82
SSBP4-202ENST00000348495 RUFY2Q8WXA3 655 aa32.65■■■□□ 2.82
SSBP4-202ENST00000348495 NSUN4Q96CB9 384 aaKnown RBP32.65■■■□□ 2.82
SSBP4-202ENST00000348495 ZNF532Q9HCE3 1301 aa32.65■■■□□ 2.82
SSBP4-202ENST00000348495 LDHBP07195 334 aaKnown RBP32.65■■■□□ 2.82
SSBP4-202ENST00000348495 JDP2Q8WYK2 163 aa32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms