RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 NF2P35240 595 aa12.32□□□□□ -0.44
MRPL55-204ENST00000348259 MKRN3Q13064 507 aaKnown RBP12.32□□□□□ -0.44
MRPL55-204ENST00000348259 ARMC9Q7Z3E5 817 aa12.32□□□□□ -0.44
MRPL55-204ENST00000348259 IFNL1Q8IU54 200 aa12.32□□□□□ -0.44
MRPL55-204ENST00000348259 OGFOD1Q8N543 542 aa12.32□□□□□ -0.44
MRPL55-204ENST00000348259 CERS5Q8N5B7 392 aa12.32□□□□□ -0.44
MRPL55-204ENST00000348259 ARMC5Q96C12 935 aa12.32□□□□□ -0.44
MRPL55-204ENST00000348259 PLA2G12BQ9BX93 195 aa12.32□□□□□ -0.44
MRPL55-204ENST00000348259 PPP4R2Q9NY27 417 aa12.32□□□□□ -0.44
MRPL55-204ENST00000348259 AOX1Q06278 1338 aa12.32□□□□□ -0.44
MRPL55-204ENST00000348259 GJA5P36382 358 aa12.31□□□□□ -0.44
MRPL55-204ENST00000348259 INHBEP58166 350 aa12.31□□□□□ -0.44
MRPL55-204ENST00000348259 KSR2Q6VAB6 950 aa12.31□□□□□ -0.44
MRPL55-204ENST00000348259 C15orf52Q6ZUT6 534 aaKnown RBP12.31□□□□□ -0.44
MRPL55-204ENST00000348259 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.31□□□□□ -0.44
MRPL55-204ENST00000348259 WNK4Q96J92 1243 aa12.31□□□□□ -0.44
MRPL55-204ENST00000348259 MAP3K2Q9Y2U5 619 aa12.31□□□□□ -0.44
MRPL55-204ENST00000348259 ZNF804BA4D1E1 1349 aa12.31□□□□□ -0.44
MRPL55-204ENST00000348259 TESPA1A2RU30 521 aaPredicted RBP12.3□□□□□ -0.44
MRPL55-204ENST00000348259 PI4KAP2A4QPH2 592 aa12.3□□□□□ -0.44
MRPL55-204ENST00000348259 NEURL1BA8MQ27 555 aa12.3□□□□□ -0.44
MRPL55-204ENST00000348259 CSF1RP07333 972 aa12.3□□□□□ -0.44
MRPL55-204ENST00000348259 GNAI1P63096 354 aa12.3□□□□□ -0.44
MRPL55-204ENST00000348259 TTLL12Q14166 644 aaPredicted RBP12.3□□□□□ -0.44
MRPL55-204ENST00000348259 INTS3Q68E01 1043 aaKnown RBP12.3□□□□□ -0.44
MRPL55-204ENST00000348259 TTLL5Q6EMB2 1281 aa12.3□□□□□ -0.44
MRPL55-204ENST00000348259 KIAA0825Q8IV33 1275 aa12.3□□□□□ -0.44
MRPL55-204ENST00000348259 TSPYL6Q8N831 410 aa12.3□□□□□ -0.44
MRPL55-204ENST00000348259 PI4KAP1Q8N8J0 262 aa12.3□□□□□ -0.44
MRPL55-204ENST00000348259 CLMNQ96JQ2 1002 aa12.3□□□□□ -0.44
MRPL55-204ENST00000348259 DEFB129Q9H1M3 183 aa12.3□□□□□ -0.44
MRPL55-204ENST00000348259 ANGEL1Q9UNK9 670 aaKnown RBP12.3□□□□□ -0.44
MRPL55-204ENST00000348259 PTPN22Q9Y2R2 807 aa12.3□□□□□ -0.44
MRPL55-204ENST00000348259 PCDHAC2Q9Y5I4 1007 aa12.3□□□□□ -0.44
MRPL55-204ENST00000348259 ZSWIM8A7E2V4 1837 aa12.3□□□□□ -0.44
MRPL55-204ENST00000348259 ELL2O00472 640 aaPredicted RBP12.29□□□□□ -0.44
MRPL55-204ENST00000348259 DDX58O95786 925 aaKnown RBP12.29□□□□□ -0.44
MRPL55-204ENST00000348259 FXR1P51114 621 aaKnown RBP eCLIP12.29□□□□□ -0.44
MRPL55-204ENST00000348259 PRKG1Q13976 671 aa12.29□□□□□ -0.44
MRPL55-204ENST00000348259 CWF19L2Q2TBE0 894 aaKnown RBP12.29□□□□□ -0.44
MRPL55-204ENST00000348259 PTPN18Q99952 460 aa12.29□□□□□ -0.44
MRPL55-204ENST00000348259 CD209Q9NNX6 404 aa12.29□□□□□ -0.44
MRPL55-204ENST00000348259 TRIM17Q9Y577 477 aa12.29□□□□□ -0.44
MRPL55-204ENST00000348259 PPP2R3BQ9Y5P8 575 aa12.29□□□□□ -0.44
MRPL55-204ENST00000348259 TRIOBPQ9H2D6 2365 aa12.29□□□□□ -0.44
MRPL55-204ENST00000348259 FANCIQ9NVI1 1328 aa12.29□□□□□ -0.44
MRPL55-204ENST00000348259 GTF2IP78347 998 aa12.28□□□□□ -0.44
MRPL55-204ENST00000348259 CCDC30Q5VVM6 783 aa12.28□□□□□ -0.44
MRPL55-204ENST00000348259 SPDYE2BA6NHP3 402 aa12.27□□□□□ -0.45
MRPL55-204ENST00000348259 SNAP23O00161 211 aa12.27□□□□□ -0.45
MRPL55-204ENST00000348259 USP2O75604 605 aaPredicted RBP12.27□□□□□ -0.45
MRPL55-204ENST00000348259 SPDYE6P0CI01 402 aa12.27□□□□□ -0.45
MRPL55-204ENST00000348259 IL1R1P14778 569 aa12.27□□□□□ -0.45
MRPL55-204ENST00000348259 ITGA6P23229 1130 aa12.27□□□□□ -0.45
MRPL55-204ENST00000348259 RARSP54136 660 aaKnown RBP12.27□□□□□ -0.45
MRPL55-204ENST00000348259 FKBP1AP62942 108 aaKnown RBP12.27□□□□□ -0.45
MRPL55-204ENST00000348259 CRHR2Q13324 411 aa12.27□□□□□ -0.45
MRPL55-204ENST00000348259 G2E3Q7L622 706 aa12.27□□□□□ -0.45
MRPL55-204ENST00000348259 CD99L2Q8TCZ2 262 aa12.27□□□□□ -0.45
MRPL55-204ENST00000348259 SLC10A4Q96EP9 437 aa12.27□□□□□ -0.45
MRPL55-204ENST00000348259 ANKRD2Q9GZV1 360 aa12.27□□□□□ -0.45
MRPL55-204ENST00000348259 IRX6P78412 446 aaPredicted RBP12.26□□□□□ -0.45
MRPL55-204ENST00000348259 CHRNDQ07001 517 aa12.26□□□□□ -0.45
MRPL55-204ENST00000348259 GCKRQ14397 625 aa12.26□□□□□ -0.45
MRPL55-204ENST00000348259 NBPF12Q5TAG4 269 aaPredicted RBP12.26□□□□□ -0.45
MRPL55-204ENST00000348259 UBE3BQ7Z3V4 1068 aa12.26□□□□□ -0.45
MRPL55-204ENST00000348259 ERO1AQ96HE7 468 aa12.26□□□□□ -0.45
MRPL55-204ENST00000348259 ZNF333Q96JL9 665 aa12.26□□□□□ -0.45
MRPL55-204ENST00000348259 MS4A4AQ96JQ5 239 aa12.26□□□□□ -0.45
MRPL55-204ENST00000348259 PRMT6Q96LA8 375 aaPredicted RBP12.26□□□□□ -0.45
MRPL55-204ENST00000348259 EN2P19622 333 aaPredicted RBP12.25□□□□□ -0.45
MRPL55-204ENST00000348259 IGHMBP2P38935 993 aaKnown RBP12.25□□□□□ -0.45
MRPL55-204ENST00000348259 PDE3AQ14432 1141 aa12.25□□□□□ -0.45
MRPL55-204ENST00000348259 DLGAP5Q15398 846 aa12.25□□□□□ -0.45
MRPL55-204ENST00000348259 FBXW7Q969H0 707 aa12.25□□□□□ -0.45
MRPL55-204ENST00000348259 TEPSINQ96N21 525 aa12.25□□□□□ -0.45
MRPL55-204ENST00000348259 CFAP100Q494V2 611 aa12.24□□□□□ -0.45
MRPL55-204ENST00000348259 FAM205AQ6ZU69 1335 aa12.24□□□□□ -0.45
MRPL55-204ENST00000348259 CHMP4AQ9BY43 222 aa12.24□□□□□ -0.45
MRPL55-204ENST00000348259 COL6A3P12111 3177 aa12.23□□□□□ -0.45
MRPL55-204ENST00000348259 CLRN2A0PK11 232 aa12.23□□□□□ -0.45
MRPL55-204ENST00000348259 PPP1R12BO60237 982 aaPredicted RBP12.23□□□□□ -0.45
MRPL55-204ENST00000348259 FOXO4P98177 505 aa12.23□□□□□ -0.45
MRPL55-204ENST00000348259 SP3Q02447 781 aa12.23□□□□□ -0.45
MRPL55-204ENST00000348259 EXOSC9Q06265 439 aaKnown RBP12.23□□□□□ -0.45
MRPL55-204ENST00000348259 NEXNQ0ZGT2 675 aa12.23□□□□□ -0.45
MRPL55-204ENST00000348259 ALDH1L2Q3SY69 923 aa12.23□□□□□ -0.45
MRPL55-204ENST00000348259 SUPT20HL1Q3ZLR7 823 aa12.23□□□□□ -0.45
MRPL55-204ENST00000348259 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.23□□□□□ -0.45
MRPL55-204ENST00000348259 CDAN1Q8IWY9 1227 aa12.23□□□□□ -0.45
MRPL55-204ENST00000348259 ANKRD13AQ8IZ07 590 aa12.23□□□□□ -0.45
MRPL55-204ENST00000348259 TSR2Q969E8 191 aaKnown RBP12.23□□□□□ -0.45
MRPL55-204ENST00000348259 EFCC1Q9HA90 598 aa12.23□□□□□ -0.45
MRPL55-204ENST00000348259 LAMA3Q16787 3333 aa12.22□□□□□ -0.45
MRPL55-204ENST00000348259 BCAR3O75815 825 aa12.22□□□□□ -0.45
MRPL55-204ENST00000348259 AAMPQ13685 434 aa12.22□□□□□ -0.45
MRPL55-204ENST00000348259 RASA3Q14644 834 aa12.22□□□□□ -0.45
MRPL55-204ENST00000348259 SPDYE2Q495Y8 402 aa12.22□□□□□ -0.45
MRPL55-204ENST00000348259 BRI3BPQ8WY22 251 aa12.22□□□□□ -0.45
MRPL55-204ENST00000348259 A0A0C4DFX4 3053 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms