RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 DEFB132Q7Z7B7 95 aa25.69■■□□□ 1.7
TSPAN3-202ENST00000346495 UPF3BQ9BZI7 483 aaKnown RBP25.69■■□□□ 1.7
TSPAN3-202ENST00000346495 HSP90AA1P07900 732 aaKnown RBP25.68■■□□□ 1.7
TSPAN3-202ENST00000346495 HSPD1P10809 573 aaKnown RBP25.68■■□□□ 1.7
TSPAN3-202ENST00000346495 LRRC37AA6NMS7 1700 aa25.68■■□□□ 1.7
TSPAN3-202ENST00000346495 PDS5AQ29RF7 1337 aaKnown RBP25.68■■□□□ 1.7
TSPAN3-202ENST00000346495 IRS2Q9Y4H2 1338 aa25.68■■□□□ 1.7
TSPAN3-202ENST00000346495 NPR1P16066 1061 aa25.67■■□□□ 1.7
TSPAN3-202ENST00000346495 KLRK1P26718 216 aa25.67■■□□□ 1.7
TSPAN3-202ENST00000346495 PSMA5P28066 241 aa25.67■■□□□ 1.7
TSPAN3-202ENST00000346495 JAKMIP1Q96N16 626 aaKnown RBP25.67■■□□□ 1.7
TSPAN3-202ENST00000346495 PUS7LQ9H0K6 701 aaKnown RBP25.67■■□□□ 1.7
TSPAN3-202ENST00000346495 WWC3Q9ULE0 1092 aa25.67■■□□□ 1.7
TSPAN3-202ENST00000346495 IQSEC3Q9UPP2 1182 aaPredicted RBP25.67■■□□□ 1.7
TSPAN3-202ENST00000346495 ZNF532Q9HCE3 1301 aa25.67■■□□□ 1.7
TSPAN3-202ENST00000346495 TCRBV5S4A2TA0A5A2 114 aa25.66■■□□□ 1.7
TSPAN3-202ENST00000346495 SRGNP10124 158 aa25.66■■□□□ 1.7
TSPAN3-202ENST00000346495 CASTP20810 708 aaKnown RBP25.66■■□□□ 1.7
TSPAN3-202ENST00000346495 KRT32Q14532 448 aa25.66■■□□□ 1.7
TSPAN3-202ENST00000346495 ZSWIM6Q9HCJ5 1215 aa25.66■■□□□ 1.7
TSPAN3-202ENST00000346495 ATP2B4P23634 1241 aa25.66■■□□□ 1.7
TSPAN3-202ENST00000346495 GPSM2P81274 684 aa25.66■■□□□ 1.7
TSPAN3-202ENST00000346495 VPS53Q5VIR6 699 aa25.66■■□□□ 1.7
TSPAN3-202ENST00000346495 C15orf52Q6ZUT6 534 aaKnown RBP25.66■■□□□ 1.7
TSPAN3-202ENST00000346495 CCDC125Q86Z20 511 aa25.66■■□□□ 1.7
TSPAN3-202ENST00000346495 RPAP1Q9BWH6 1393 aaPredicted RBP25.65■■□□□ 1.7
TSPAN3-202ENST00000346495 COL1A1P02452 1464 aaPredicted RBP25.65■■□□□ 1.7
TSPAN3-202ENST00000346495 GPAA1O43292 621 aa25.65■■□□□ 1.7
TSPAN3-202ENST00000346495 ADCK5Q3MIX3 580 aa25.65■■□□□ 1.7
TSPAN3-202ENST00000346495 MAGEB6Q8N7X4 407 aa25.65■■□□□ 1.7
TSPAN3-202ENST00000346495 LRP2BPQ9P2M1 347 aa25.65■■□□□ 1.7
TSPAN3-202ENST00000346495 CYP46A1Q9Y6A2 500 aa25.65■■□□□ 1.7
TSPAN3-202ENST00000346495 COL11A2P13942 1736 aaPredicted RBP25.64■■□□□ 1.7
TSPAN3-202ENST00000346495 PPEF1O14829 653 aaPredicted RBP25.64■■□□□ 1.7
TSPAN3-202ENST00000346495 FRAT2O75474 233 aaPredicted RBP25.64■■□□□ 1.7
TSPAN3-202ENST00000346495 ALDH1B1P30837 517 aa25.64■■□□□ 1.7
TSPAN3-202ENST00000346495 TTC14Q96N46 770 aa25.64■■□□□ 1.7
TSPAN3-202ENST00000346495 PODXL2Q9NZ53 605 aa25.64■■□□□ 1.7
TSPAN3-202ENST00000346495 SP8Q8IXZ3 490 aa25.63■■□□□ 1.69
TSPAN3-202ENST00000346495 CTNNA3Q9UI47 895 aa25.63■■□□□ 1.69
TSPAN3-202ENST00000346495 GGA1Q9UJY5 639 aa25.63■■□□□ 1.69
TSPAN3-202ENST00000346495 NSFL1CQ9UNZ2 370 aaKnown RBP25.63■■□□□ 1.69
TSPAN3-202ENST00000346495 RUFY3Q7L099 469 aa25.63■■□□□ 1.69
TSPAN3-202ENST00000346495 MASTLQ96GX5 879 aa25.63■■□□□ 1.69
TSPAN3-202ENST00000346495 CYP21A2P08686 494 aa25.62■■□□□ 1.69
TSPAN3-202ENST00000346495 TXNRD3Q86VQ6 643 aa25.62■■□□□ 1.69
TSPAN3-202ENST00000346495 UFL1O94874 794 aa25.61■■□□□ 1.69
TSPAN3-202ENST00000346495 ZNF804AQ7Z570 1209 aa25.61■■□□□ 1.69
TSPAN3-202ENST00000346495 SLC51AQ86UW1 340 aa25.61■■□□□ 1.69
TSPAN3-202ENST00000346495 PDRG1Q9NUG6 133 aa25.61■■□□□ 1.69
TSPAN3-202ENST00000346495 CHMP5Q9NZZ3 219 aa25.61■■□□□ 1.69
TSPAN3-202ENST00000346495 ABCF2Q9UG63 623 aa25.61■■□□□ 1.69
TSPAN3-202ENST00000346495 ATP6V0A2Q9Y487 856 aa25.61■■□□□ 1.69
TSPAN3-202ENST00000346495 LTBP1Q14766 1721 aa25.6■■□□□ 1.69
TSPAN3-202ENST00000346495 BLOC1S2Q6QNY1 142 aa25.6■■□□□ 1.69
TSPAN3-202ENST00000346495 AIDAQ96BJ3 306 aa25.6■■□□□ 1.69
TSPAN3-202ENST00000346495 TMX3Q96JJ7 454 aa25.6■■□□□ 1.69
TSPAN3-202ENST00000346495 DDIT3P35638 169 aa25.59■■□□□ 1.69
TSPAN3-202ENST00000346495 RAI14Q9P0K7 980 aa25.59■■□□□ 1.69
TSPAN3-202ENST00000346495 FOXP2O15409 715 aa25.59■■□□□ 1.69
TSPAN3-202ENST00000346495 AK2P54819 239 aa25.59■■□□□ 1.69
TSPAN3-202ENST00000346495 CIZ1Q9ULV3 898 aaPredicted RBP25.59■■□□□ 1.69
TSPAN3-202ENST00000346495 TAF6LQ9Y6J9 622 aa25.59■■□□□ 1.69
TSPAN3-202ENST00000346495 CPA1P15085 419 aa25.58■■□□□ 1.69
TSPAN3-202ENST00000346495 C2CD5Q86YS7 1000 aa25.58■■□□□ 1.69
TSPAN3-202ENST00000346495 STRBPQ96SI9 672 aaKnown RBP25.58■■□□□ 1.69
TSPAN3-202ENST00000346495 RPS6KB1P23443 525 aa25.57■■□□□ 1.68
TSPAN3-202ENST00000346495 STYK1Q6J9G0 422 aa25.57■■□□□ 1.68
TSPAN3-202ENST00000346495 TDRD7Q8NHU6 1098 aaKnown RBP25.57■■□□□ 1.68
TSPAN3-202ENST00000346495 TBC1D16Q8TBP0 767 aa25.57■■□□□ 1.68
TSPAN3-202ENST00000346495 SLC16A10Q8TF71 515 aa25.57■■□□□ 1.68
TSPAN3-202ENST00000346495 NEK1Q96PY6 1258 aa25.57■■□□□ 1.68
TSPAN3-202ENST00000346495 FOXD4L1Q9NU39 408 aa25.57■■□□□ 1.68
TSPAN3-202ENST00000346495 CACNA1SQ13698 1873 aa25.57■■□□□ 1.68
TSPAN3-202ENST00000346495 MAST2Q6P0Q8 1798 aa25.56■■□□□ 1.68
TSPAN3-202ENST00000346495 H0YIN7 160 aa25.56■■□□□ 1.68
TSPAN3-202ENST00000346495 IGSF3O75054 1194 aa25.56■■□□□ 1.68
TSPAN3-202ENST00000346495 FGAP02671 866 aa25.56■■□□□ 1.68
TSPAN3-202ENST00000346495 CYP7A1P22680 504 aa25.56■■□□□ 1.68
TSPAN3-202ENST00000346495 CUL4AQ13619 759 aa25.56■■□□□ 1.68
TSPAN3-202ENST00000346495 IMMTQ16891 758 aaKnown RBP25.56■■□□□ 1.68
TSPAN3-202ENST00000346495 TMED8Q6PL24 325 aaPredicted RBP25.56■■□□□ 1.68
TSPAN3-202ENST00000346495 TMX4Q9H1E5 349 aaPredicted RBP25.56■■□□□ 1.68
TSPAN3-202ENST00000346495 ALDH8A1Q9H2A2 487 aaPredicted RBP25.56■■□□□ 1.68
TSPAN3-202ENST00000346495 LIMCH1Q9UPQ0 1083 aa25.56■■□□□ 1.68
TSPAN3-202ENST00000346495 CCDC88AQ3V6T2 1871 aa25.56■■□□□ 1.68
TSPAN3-202ENST00000346495 LAMA4Q16363 1823 aa25.56■■□□□ 1.68
TSPAN3-202ENST00000346495 MBD4O95243 580 aa25.55■■□□□ 1.68
TSPAN3-202ENST00000346495 HMGB1P09429 215 aaKnown RBP25.55■■□□□ 1.68
TSPAN3-202ENST00000346495 GNAT2P19087 354 aa25.55■■□□□ 1.68
TSPAN3-202ENST00000346495 CHAF1AQ13111 956 aaPredicted RBP25.55■■□□□ 1.68
TSPAN3-202ENST00000346495 NOL8Q76FK4 1167 aaKnown RBP25.55■■□□□ 1.68
TSPAN3-202ENST00000346495 ZGPATQ8N5A5 531 aaKnown RBP25.55■■□□□ 1.68
TSPAN3-202ENST00000346495 SALL1Q9NSC2 1324 aa25.55■■□□□ 1.68
TSPAN3-202ENST00000346495 WDR66Q8TBY9 1149 aa25.55■■□□□ 1.68
TSPAN3-202ENST00000346495 ZNF622Q969S3 477 aaKnown RBP eCLIP25.55■■□□□ 1.68
TSPAN3-202ENST00000346495 CWC22Q9HCG8 908 aaKnown RBP25.55■■□□□ 1.68
TSPAN3-202ENST00000346495 POLLQ9UGP5 575 aa25.55■■□□□ 1.68
TSPAN3-202ENST00000346495 ANKRD1Q15327 319 aa25.54■■□□□ 1.68
TSPAN3-202ENST00000346495 SPTY2D1Q68D10 685 aaPredicted RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms