RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 TXNRD1Q16881 649 aa22.1■■□□□ 1.13
HOXA9-201ENST00000343483 NBPF5PQ86XG9 351 aaPredicted RBP22.1■■□□□ 1.13
HOXA9-201ENST00000343483 ANKRD18AQ8IVF6 992 aa22.1■■□□□ 1.13
HOXA9-201ENST00000343483 ARHGEF1Q92888 912 aaKnown RBP22.1■■□□□ 1.13
HOXA9-201ENST00000343483 NYXQ9GZU5 481 aa22.1■■□□□ 1.13
HOXA9-201ENST00000343483 GJB2P29033 226 aa22.09■■□□□ 1.13
HOXA9-201ENST00000343483 SF3B3Q15393 1217 aaKnown RBP22.09■■□□□ 1.13
HOXA9-201ENST00000343483 SPATA5Q8NB90 893 aa22.09■■□□□ 1.13
HOXA9-201ENST00000343483 LRRC4BQ9NT99 713 aa22.09■■□□□ 1.13
HOXA9-201ENST00000343483 ADD2P35612 726 aa22.08■■□□□ 1.13
HOXA9-201ENST00000343483 RASGRF1Q13972 1273 aa22.08■■□□□ 1.13
HOXA9-201ENST00000343483 TTLL5Q6EMB2 1281 aa22.08■■□□□ 1.13
HOXA9-201ENST00000343483 GPAA1O43292 621 aa22.08■■□□□ 1.12
HOXA9-201ENST00000343483 HMGB1P09429 215 aaKnown RBP22.08■■□□□ 1.12
HOXA9-201ENST00000343483 CAVIN1Q6NZI2 390 aaKnown RBP22.08■■□□□ 1.12
HOXA9-201ENST00000343483 Q6ZUG5 572 aa22.08■■□□□ 1.12
HOXA9-201ENST00000343483 COL4A1P02462 1669 aa22.07■■□□□ 1.12
HOXA9-201ENST00000343483 SYT1P21579 422 aa22.07■■□□□ 1.12
HOXA9-201ENST00000343483 FGD1P98174 961 aa22.07■■□□□ 1.12
HOXA9-201ENST00000343483 FOXD4L6Q3SYB3 417 aaPredicted RBP22.07■■□□□ 1.12
HOXA9-201ENST00000343483 FOXD4L3Q6VB84 417 aaPredicted RBP22.07■■□□□ 1.12
HOXA9-201ENST00000343483 FAM43AQ8N2R8 423 aa22.07■■□□□ 1.12
HOXA9-201ENST00000343483 CTNNA3Q9UI47 895 aa22.07■■□□□ 1.12
HOXA9-201ENST00000343483 AKAP11Q9UKA4 1901 aa22.07■■□□□ 1.12
HOXA9-201ENST00000343483 E7EWF7 191 aa22.07■■□□□ 1.12
HOXA9-201ENST00000343483 FOXP2O15409 715 aa22.07■■□□□ 1.12
HOXA9-201ENST00000343483 STX6O43752 255 aa22.07■■□□□ 1.12
HOXA9-201ENST00000343483 BCAMP50895 628 aa22.07■■□□□ 1.12
HOXA9-201ENST00000343483 STK3Q13188 491 aa22.07■■□□□ 1.12
HOXA9-201ENST00000343483 LRRC2Q9BYS8 371 aa22.07■■□□□ 1.12
HOXA9-201ENST00000343483 ARAP2Q8WZ64 1704 aa22.06■■□□□ 1.12
HOXA9-201ENST00000343483 RFC4P35249 363 aa22.06■■□□□ 1.12
HOXA9-201ENST00000343483 SLC10A5Q5PT55 438 aa22.06■■□□□ 1.12
HOXA9-201ENST00000343483 ZNF532Q9HCE3 1301 aa22.05■■□□□ 1.12
HOXA9-201ENST00000343483 PSDA5PKW4 1024 aaPredicted RBP22.05■■□□□ 1.12
HOXA9-201ENST00000343483 PDE6AP16499 860 aa22.05■■□□□ 1.12
HOXA9-201ENST00000343483 DHX32Q7L7V1 743 aaKnown RBP22.05■■□□□ 1.12
HOXA9-201ENST00000343483 CCDC24Q8N4L8 307 aa22.05■■□□□ 1.12
HOXA9-201ENST00000343483 GPT2Q8TD30 523 aa22.05■■□□□ 1.12
HOXA9-201ENST00000343483 WWC3Q9ULE0 1092 aa22.05■■□□□ 1.12
HOXA9-201ENST00000343483 UBE3CQ15386 1083 aa22.05■■□□□ 1.12
HOXA9-201ENST00000343483 TRAPPC3LQ5T215 181 aa22.05■■□□□ 1.12
HOXA9-201ENST00000343483 TPTE2Q6XPS3 522 aa22.05■■□□□ 1.12
HOXA9-201ENST00000343483 ANO8Q9HCE9 1232 aaPredicted RBP22.05■■□□□ 1.12
HOXA9-201ENST00000343483 BSDC1Q9NW68 430 aaPredicted RBP22.05■■□□□ 1.12
HOXA9-201ENST00000343483 NPHP1O15259 732 aa22.04■■□□□ 1.12
HOXA9-201ENST00000343483 LY75O60449 1722 aa22.04■■□□□ 1.12
HOXA9-201ENST00000343483 FGAP02671 866 aa22.04■■□□□ 1.12
HOXA9-201ENST00000343483 ZSCAN22P10073 491 aaPredicted RBP22.04■■□□□ 1.12
HOXA9-201ENST00000343483 HAND2P61296 217 aa22.04■■□□□ 1.12
HOXA9-201ENST00000343483 IMMTQ16891 758 aaKnown RBP22.04■■□□□ 1.12
HOXA9-201ENST00000343483 BRF1Q92994 677 aa22.04■■□□□ 1.12
HOXA9-201ENST00000343483 NLRP3Q96P20 1036 aa22.04■■□□□ 1.12
HOXA9-201ENST00000343483 ZNF445P59923 1031 aa22.03■■□□□ 1.12
HOXA9-201ENST00000343483 ZSCAN23Q3MJ62 389 aa22.03■■□□□ 1.12
HOXA9-201ENST00000343483 CELF1Q92879 486 aaKnown RBP22.03■■□□□ 1.12
HOXA9-201ENST00000343483 C4BP0C0L5 1744 aa22.03■■□□□ 1.12
HOXA9-201ENST00000343483 RGPD3A6NKT7 1758 aaPredicted RBP22.02■■□□□ 1.12
HOXA9-201ENST00000343483 RGPD4Q7Z3J3 1758 aa22.02■■□□□ 1.12
HOXA9-201ENST00000343483 MAP3K12Q12852 859 aa22.02■■□□□ 1.12
HOXA9-201ENST00000343483 MINPP1Q9UNW1 487 aa22.02■■□□□ 1.11
HOXA9-201ENST00000343483 TCRBV5S4A2TA0A5A2 114 aa22.01■■□□□ 1.11
HOXA9-201ENST00000343483 R3HDM1Q15032 1099 aaKnown RBP22.01■■□□□ 1.11
HOXA9-201ENST00000343483 MAGEB6Q8N7X4 407 aa22.01■■□□□ 1.11
HOXA9-201ENST00000343483 TAF1LQ8IZX4 1826 aa22■■□□□ 1.11
HOXA9-201ENST00000343483 WTIPA6NIX2 430 aaPredicted RBP22■■□□□ 1.11
HOXA9-201ENST00000343483 APPP05067 770 aa22■■□□□ 1.11
HOXA9-201ENST00000343483 EXOSC10Q01780 885 aaKnown RBP22■■□□□ 1.11
HOXA9-201ENST00000343483 GTF3C6Q969F1 213 aa22■■□□□ 1.11
HOXA9-201ENST00000343483 AIDAQ96BJ3 306 aa22■■□□□ 1.11
HOXA9-201ENST00000343483 RBM27Q9P2N5 1060 aaKnown RBP22■■□□□ 1.11
HOXA9-201ENST00000343483 IQSEC3Q9UPP2 1182 aaPredicted RBP22■■□□□ 1.11
HOXA9-201ENST00000343483 MYH7P12883 1935 aa22■■□□□ 1.11
HOXA9-201ENST00000343483 VPS37CA5D8V6 355 aaPredicted RBP22■■□□□ 1.11
HOXA9-201ENST00000343483 MBD3O95983 291 aa22■■□□□ 1.11
HOXA9-201ENST00000343483 F13A1P00488 732 aa22■■□□□ 1.11
HOXA9-201ENST00000343483 CHST3Q7LGC8 479 aa22■■□□□ 1.11
HOXA9-201ENST00000343483 COL24A1Q17RW2 1714 aa22■■□□□ 1.11
HOXA9-201ENST00000343483 ZNF213O14771 459 aa21.99■■□□□ 1.11
HOXA9-201ENST00000343483 GYG1P46976 350 aa21.99■■□□□ 1.11
HOXA9-201ENST00000343483 RPS8P62241 208 aaKnown RBP21.99■■□□□ 1.11
HOXA9-201ENST00000343483 MTMR6Q9Y217 621 aa21.99■■□□□ 1.11
HOXA9-201ENST00000343483 UBE4AQ14139 1066 aa21.99■■□□□ 1.11
HOXA9-201ENST00000343483 LARP1BQ659C4 914 aaKnown RBP21.99■■□□□ 1.11
HOXA9-201ENST00000343483 PDGFDQ9GZP0 370 aaPredicted RBP21.99■■□□□ 1.11
HOXA9-201ENST00000343483 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.98■■□□□ 1.11
HOXA9-201ENST00000343483 APOBRQ0VD83 1088 aa21.98■■□□□ 1.11
HOXA9-201ENST00000343483 GDPD2Q9HCC8 539 aa21.98■■□□□ 1.11
HOXA9-201ENST00000343483 NSFL1CQ9UNZ2 370 aaKnown RBP21.98■■□□□ 1.11
HOXA9-201ENST00000343483 ZNF827Q17R98 1081 aa21.97■■□□□ 1.11
HOXA9-201ENST00000343483 VPS37DQ86XT2 251 aa21.97■■□□□ 1.11
HOXA9-201ENST00000343483 GNL3LQ9NVN8 582 aaKnown RBP21.97■■□□□ 1.11
HOXA9-201ENST00000343483 LRP2BPQ9P2M1 347 aa21.97■■□□□ 1.11
HOXA9-201ENST00000343483 ATP6V1DQ9Y5K8 247 aa21.97■■□□□ 1.11
HOXA9-201ENST00000343483 CARMIL3Q8ND23 1372 aa21.97■■□□□ 1.11
HOXA9-201ENST00000343483 TAF1P21675 1872 aa21.97■■□□□ 1.11
HOXA9-201ENST00000343483 PDCP20941 246 aa21.97■■□□□ 1.11
HOXA9-201ENST00000343483 NASPP49321 788 aaPredicted RBP21.97■■□□□ 1.11
HOXA9-201ENST00000343483 NFIXQ14938 502 aa21.97■■□□□ 1.11
HOXA9-201ENST00000343483 CAVIN4Q5BKX8 364 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms