RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 TRIM21P19474 475 aaKnown RBP9.19□□□□□ -0.94
UBE4B-202ENST00000343090 KARSQ15046 597 aaKnown RBP9.19□□□□□ -0.94
UBE4B-202ENST00000343090 NAA16Q6N069 864 aaPredicted RBP9.19□□□□□ -0.94
UBE4B-202ENST00000343090 EDC3Q96F86 508 aaKnown RBP9.19□□□□□ -0.94
UBE4B-202ENST00000343090 CNNM2Q9H8M5 875 aa9.19□□□□□ -0.94
UBE4B-202ENST00000343090 GOPCQ9HD26 462 aa9.19□□□□□ -0.94
UBE4B-202ENST00000343090 IBTKQ9P2D0 1353 aaPredicted RBP9.19□□□□□ -0.94
UBE4B-202ENST00000343090 DZIP3Q86Y13 1208 aaKnown RBP9.19□□□□□ -0.94
UBE4B-202ENST00000343090 F8W031 263 aaPredicted RBP9.19□□□□□ -0.94
UBE4B-202ENST00000343090 TSPY3P0CV98 308 aa9.19□□□□□ -0.94
UBE4B-202ENST00000343090 TSPY8P0CW00 308 aa9.19□□□□□ -0.94
UBE4B-202ENST00000343090 ZNF790Q6PG37 636 aa9.19□□□□□ -0.94
UBE4B-202ENST00000343090 NEK11Q8NG66 645 aa9.19□□□□□ -0.94
UBE4B-202ENST00000343090 PLIN2Q99541 437 aa9.19□□□□□ -0.94
UBE4B-202ENST00000343090 PALD1Q9ULE6 856 aa9.19□□□□□ -0.94
UBE4B-202ENST00000343090 PYCARDQ9ULZ3 195 aa9.19□□□□□ -0.94
UBE4B-202ENST00000343090 GOLGA6L9A6NEM1 432 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 TMCO5BA8MYB1 307 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 FGFR1OPO95684 399 aaKnown RBP9.18□□□□□ -0.94
UBE4B-202ENST00000343090 BAG3O95817 575 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 CDC37L1Q7L3B6 337 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 MMRN2Q9H8L6 949 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 EXOC1Q9NV70 894 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 RAD50Q92878 1312 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 SBNO1A3KN83 1393 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 KCNQ3O43525 872 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 AMPD3Q01432 767 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 HLTFQ14527 1009 aaKnown RBP eCLIP9.18□□□□□ -0.94
UBE4B-202ENST00000343090 DCAF5Q96JK2 942 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 KDM5CP41229 1560 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 ABCC4O15439 1325 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 MAGEB6P1A0A0J9YX57 407 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 JAK2O60674 1132 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 ZSCAN20P17040 1043 aaPredicted RBP9.18□□□□□ -0.94
UBE4B-202ENST00000343090 RNF187Q5TA31 235 aaPredicted RBP9.18□□□□□ -0.94
UBE4B-202ENST00000343090 TICAM2Q86XR7 235 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 ORAI2Q96SN7 254 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 TRIM75PA6NK02 468 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 CD2BP2O95400 341 aaKnown RBP9.18□□□□□ -0.94
UBE4B-202ENST00000343090 NOP2P46087 812 aaKnown RBP9.18□□□□□ -0.94
UBE4B-202ENST00000343090 LZTFL1Q9NQ48 299 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 B4E1Z4 1266 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 POTEB2H3BUK9 544 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 IL2RBP14784 551 aa9.18□□□□□ -0.94
UBE4B-202ENST00000343090 PRPF4BQ13523 1007 aaKnown RBP9.18□□□□□ -0.94
UBE4B-202ENST00000343090 TRPM2O94759 1503 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 INSRP06213 1382 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 ADGBQ8N7X0 1667 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 AKR1B10O60218 316 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 MCM7P33993 719 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 VPS36Q86VN1 386 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 TMTC2Q8N394 836 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 ALS2CR12Q96Q35 445 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 MYCBPQ99417 103 aaPredicted RBP9.17□□□□□ -0.94
UBE4B-202ENST00000343090 METTL22Q9BUU2 404 aaPredicted RBP9.17□□□□□ -0.94
UBE4B-202ENST00000343090 MBD4O95243 580 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 LDHCP07864 332 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 NF2P35240 595 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 PICALMQ13492 652 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 SPECC1Q5M775 1068 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 TRMT2AQ8IZ69 625 aaKnown RBP9.17□□□□□ -0.94
UBE4B-202ENST00000343090 CUL5Q93034 780 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 UTP14AQ9BVJ6 771 aaKnown RBP9.17□□□□□ -0.94
UBE4B-202ENST00000343090 KDM5AP29375 1690 aaKnown RBP9.17□□□□□ -0.94
UBE4B-202ENST00000343090 MACROD2A1Z1Q3 448 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 IFFO1Q0D2I5 559 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 ZSCAN26Q16670 478 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 PLEKHF1Q96S99 279 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 RFC4P35249 363 aa9.17□□□□□ -0.94
UBE4B-202ENST00000343090 IRX5P78411 483 aaPredicted RBP9.17□□□□□ -0.94
UBE4B-202ENST00000343090 KAT6BQ8WYB5 2073 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 A1BGP04217 495 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 MCM3P25205 808 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 HSPA4P34932 840 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 CEP170Q5SW79 1584 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 WWC2Q6AWC2 1192 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 SRRTQ9BXP5 876 aaKnown RBP9.16□□□□□ -0.94
UBE4B-202ENST00000343090 CABP5Q9NP86 173 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 HELLSQ9NRZ9 838 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 OAS2P29728 719 aaKnown RBP9.16□□□□□ -0.94
UBE4B-202ENST00000343090 ASIC1P78348 528 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 FAM160A1Q05DH4 1040 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 FAM114A1Q8IWE2 563 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 CTNNBL1Q8WYA6 563 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-202ENST00000343090 DDX17Q92841 729 aaKnown RBP9.16□□□□□ -0.94
UBE4B-202ENST00000343090 MYL10Q9BUA6 226 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 CBX8Q9HC52 389 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 RMND1Q9NWS8 449 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 PUF60Q9UHX1 559 aaKnown RBP9.16□□□□□ -0.94
UBE4B-202ENST00000343090 ZNF215Q9UL58 517 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-202ENST00000343090 EYA2O00167 538 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 CLGNO14967 610 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 PTH1RQ03431 593 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 SLF2Q8IX21 1173 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 LEO1Q8WVC0 666 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-202ENST00000343090 DYDC1Q8WWB3 177 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 USP44Q9H0E7 712 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.16□□□□□ -0.944e-6■■■□□ 18.6
UBE4B-202ENST00000343090 PHACTR2O75167 634 aa9.16□□□□□ -0.94
UBE4B-202ENST00000343090 ZNF75DP51815 510 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms