RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 IL1R1P14778 569 aa16.25■□□□□ 0.19
TUBD1-202ENST00000340993 TBC1D10BQ4KMP7 808 aaPredicted RBP16.25■□□□□ 0.19
TUBD1-202ENST00000340993 HSP90AB4PQ58FF6 505 aa16.25■□□□□ 0.19
TUBD1-202ENST00000340993 DACT2Q5SW24 774 aa16.25■□□□□ 0.19
TUBD1-202ENST00000340993 SAMD7Q7Z3H4 446 aa16.25■□□□□ 0.19
TUBD1-202ENST00000340993 KIF1BPQ96EK5 621 aa16.25■□□□□ 0.19
TUBD1-202ENST00000340993 SNRKQ9NRH2 765 aa16.25■□□□□ 0.19
TUBD1-202ENST00000340993 CNOT7Q9UIV1 285 aaKnown RBP16.25■□□□□ 0.19
TUBD1-202ENST00000340993 ADAMTSL1Q8N6G6 1762 aa16.25■□□□□ 0.19
TUBD1-202ENST00000340993 EGFRP00533 1210 aa16.24■□□□□ 0.19
TUBD1-202ENST00000340993 VIL1P09327 827 aaKnown RBP16.24■□□□□ 0.19
TUBD1-202ENST00000340993 GRIK5Q16478 980 aa16.24■□□□□ 0.19
TUBD1-202ENST00000340993 C16orf71Q8IYS4 520 aaPredicted RBP16.24■□□□□ 0.19
TUBD1-202ENST00000340993 CERS5Q8N5B7 392 aa16.24■□□□□ 0.19
TUBD1-202ENST00000340993 TDRD7Q8NHU6 1098 aaKnown RBP16.24■□□□□ 0.19
TUBD1-202ENST00000340993 HACL1Q9UJ83 578 aa16.24■□□□□ 0.19
TUBD1-202ENST00000340993 DBNLQ9UJU6 430 aaKnown RBP16.24■□□□□ 0.19
TUBD1-202ENST00000340993 SCN4AP35499 1836 aa16.24■□□□□ 0.19
TUBD1-202ENST00000340993 VEGFAP15692 232 aaPredicted RBP16.23■□□□□ 0.19
TUBD1-202ENST00000340993 EPHX2P34913 555 aa16.23■□□□□ 0.19
TUBD1-202ENST00000340993 MFSD14BQ5SR56 506 aa16.23■□□□□ 0.19
TUBD1-202ENST00000340993 TTC39AQ5SRH9 613 aa16.23■□□□□ 0.19
TUBD1-202ENST00000340993 TSHZ3Q63HK5 1081 aa16.23■□□□□ 0.19
TUBD1-202ENST00000340993 TRPM4Q8TD43 1214 aa16.23■□□□□ 0.19
TUBD1-202ENST00000340993 LRRCC1Q9C099 1032 aa16.23■□□□□ 0.19
TUBD1-202ENST00000340993 GPRC5DQ9NZD1 345 aa16.23■□□□□ 0.19
TUBD1-202ENST00000340993 CLEC11AQ9Y240 323 aa16.23■□□□□ 0.19
TUBD1-202ENST00000340993 KIF3CO14782 793 aa16.23■□□□□ 0.19
TUBD1-202ENST00000340993 NEFLP07196 543 aa16.23■□□□□ 0.19
TUBD1-202ENST00000340993 RASGRF1Q13972 1273 aa16.23■□□□□ 0.19
TUBD1-202ENST00000340993 SCARF1Q14162 830 aa16.23■□□□□ 0.19
TUBD1-202ENST00000340993 STRIP1Q5VSL9 837 aa16.23■□□□□ 0.19
TUBD1-202ENST00000340993 CLASRPQ8N2M8 674 aaKnown RBP16.23■□□□□ 0.19
TUBD1-202ENST00000340993 DCTPP1Q9H773 170 aa16.23■□□□□ 0.19
TUBD1-202ENST00000340993 GNL3LQ9NVN8 582 aaKnown RBP16.23■□□□□ 0.19
TUBD1-202ENST00000340993 SCAF8Q9UPN6 1271 aaKnown RBP16.23■□□□□ 0.19
TUBD1-202ENST00000340993 MYO5AQ9Y4I1 1855 aaKnown RBP16.23■□□□□ 0.19
TUBD1-202ENST00000340993 RAB11FIP3O75154 756 aa16.22■□□□□ 0.19
TUBD1-202ENST00000340993 IFIT2P09913 472 aaKnown RBP16.22■□□□□ 0.19
TUBD1-202ENST00000340993 ANKRD45Q5TZF3 282 aa16.22■□□□□ 0.19
TUBD1-202ENST00000340993 L3MBTL3Q96JM7 780 aaPredicted RBP16.22■□□□□ 0.19
TUBD1-202ENST00000340993 TAF1DQ9H5J8 278 aaPredicted RBP16.22■□□□□ 0.19
TUBD1-202ENST00000340993 PCDHAC2Q9Y5I4 1007 aa16.22■□□□□ 0.19
TUBD1-202ENST00000340993 POLR2AP24928 1970 aaKnown RBP16.22■□□□□ 0.19
TUBD1-202ENST00000340993 IQCA1LA6NCM1 817 aa16.21■□□□□ 0.19
TUBD1-202ENST00000340993 TBC1D9Q6ZT07 1266 aa16.21■□□□□ 0.18
TUBD1-202ENST00000340993 RWDD1Q9H446 243 aaPredicted RBP16.21■□□□□ 0.18
TUBD1-202ENST00000340993 ABCF2Q9UG63 623 aa16.21■□□□□ 0.18
TUBD1-202ENST00000340993 H7C1D1 291 aa16.2■□□□□ 0.18
TUBD1-202ENST00000340993 MCAMP43121 646 aa16.2■□□□□ 0.18
TUBD1-202ENST00000340993 RBM5P52756 815 aaKnown RBP eCLIP16.2■□□□□ 0.18
TUBD1-202ENST00000340993 CCDC158Q5M9N0 1113 aa16.2■□□□□ 0.18
TUBD1-202ENST00000340993 OTUD7AQ8TE49 926 aaPredicted RBP16.2■□□□□ 0.18
TUBD1-202ENST00000340993 GPR108Q9NPR9 543 aa16.2■□□□□ 0.18
TUBD1-202ENST00000340993 AKAP11Q9UKA4 1901 aa16.2■□□□□ 0.18
TUBD1-202ENST00000340993 ASTN2O75129 1339 aaPredicted RBP16.19■□□□□ 0.18
TUBD1-202ENST00000340993 USP17L8P0C7I0 530 aa16.19■□□□□ 0.18
TUBD1-202ENST00000340993 HDAC1Q13547 482 aaPredicted RBP16.19■□□□□ 0.18
TUBD1-202ENST00000340993 TTF2Q9UNY4 1162 aaKnown RBP16.19■□□□□ 0.18
TUBD1-202ENST00000340993 PRDX5P30044 214 aa16.18■□□□□ 0.18
TUBD1-202ENST00000340993 KIF4BQ2VIQ3 1234 aa16.18■□□□□ 0.18
TUBD1-202ENST00000340993 AGBL3Q8NEM8 1001 aa16.18■□□□□ 0.18
TUBD1-202ENST00000340993 LNPKQ9C0E8 428 aa16.18■□□□□ 0.18
TUBD1-202ENST00000340993 ADARB2Q9NS39 739 aaKnown RBP16.18■□□□□ 0.18
TUBD1-202ENST00000340993 HMG20BQ9P0W2 317 aa16.18■□□□□ 0.18
TUBD1-202ENST00000340993 ZBTB47Q9UFB7 747 aaPredicted RBP16.18■□□□□ 0.18
TUBD1-202ENST00000340993 FAM205AQ6ZU69 1335 aa16.18■□□□□ 0.18
TUBD1-202ENST00000340993 RPS12P25398 132 aaKnown RBP16.18■□□□□ 0.18
TUBD1-202ENST00000340993 HIRAP54198 1017 aaPredicted RBP16.18■□□□□ 0.18
TUBD1-202ENST00000340993 MAP1SQ66K74 1059 aaPredicted RBP16.18■□□□□ 0.18
TUBD1-202ENST00000340993 OGFOD1Q8N543 542 aa16.18■□□□□ 0.18
TUBD1-202ENST00000340993 SPATA5Q8NB90 893 aa16.18■□□□□ 0.18
TUBD1-202ENST00000340993 GMLQ99445 158 aa16.18■□□□□ 0.18
TUBD1-202ENST00000340993 DNAJC2Q99543 621 aaKnown RBP16.18■□□□□ 0.18
TUBD1-202ENST00000340993 MYOZ2Q9NPC6 264 aa16.18■□□□□ 0.18
TUBD1-202ENST00000340993 DENND2AQ9ULE3 1009 aa16.18■□□□□ 0.18
TUBD1-202ENST00000340993 ZAP70P43403 619 aa16.17■□□□□ 0.18
TUBD1-202ENST00000340993 DLK2Q6UY11 383 aa16.17■□□□□ 0.18
TUBD1-202ENST00000340993 BOLA2Q9H3K6 86 aa16.17■□□□□ 0.18
TUBD1-202ENST00000340993 ARID4AP29374 1257 aaPredicted RBP16.16■□□□□ 0.18
TUBD1-202ENST00000340993 AAMPQ13685 434 aa16.16■□□□□ 0.18
TUBD1-202ENST00000340993 DPF2Q92785 391 aa16.16■□□□□ 0.18
TUBD1-202ENST00000340993 EDC3Q96F86 508 aaKnown RBP16.16■□□□□ 0.18
TUBD1-202ENST00000340993 MYH2Q9UKX2 1941 aa16.16■□□□□ 0.18
TUBD1-202ENST00000340993 AOX1Q06278 1338 aa16.16■□□□□ 0.18
TUBD1-202ENST00000340993 MAP4K4O95819 1239 aaPredicted RBP16.15■□□□□ 0.18
TUBD1-202ENST00000340993 DIXDC1Q155Q3 683 aa16.15■□□□□ 0.18
TUBD1-202ENST00000340993 NBPF9Q3BBW0 867 aa16.15■□□□□ 0.18
TUBD1-202ENST00000340993 HDAC9Q9UKV0 1011 aa16.15■□□□□ 0.18
TUBD1-202ENST00000340993 MYO3BQ8WXR4 1341 aa16.15■□□□□ 0.18
TUBD1-202ENST00000340993 UQCRFS1P1P0C7P4 283 aa16.15■□□□□ 0.18
TUBD1-202ENST00000340993 FMR1Q06787 632 aaKnown RBP eCLIP16.15■□□□□ 0.18
TUBD1-202ENST00000340993 CFAP100Q494V2 611 aa16.15■□□□□ 0.18
TUBD1-202ENST00000340993 WDR66Q8TBY9 1149 aa16.15■□□□□ 0.18
TUBD1-202ENST00000340993 GCC1Q96CN9 775 aa16.15■□□□□ 0.18
TUBD1-202ENST00000340993 ANTXR1Q9H6X2 564 aa16.15■□□□□ 0.18
TUBD1-202ENST00000340993 RAI14Q9P0K7 980 aa16.15■□□□□ 0.18
TUBD1-202ENST00000340993 CLRN2A0PK11 232 aa16.14■□□□□ 0.17
TUBD1-202ENST00000340993 LDHBP07195 334 aaKnown RBP16.14■□□□□ 0.17
TUBD1-202ENST00000340993 TBC1D22AQ8WUA7 517 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms