RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 UBA5Q9GZZ9 404 aa14.87□□□□□ -0.03
LIN54-201ENST00000340417 GPHNQ9NQX3 736 aaPredicted RBP14.87□□□□□ -0.03
LIN54-201ENST00000340417 NARFQ9UHQ1 456 aa14.87□□□□□ -0.03
LIN54-201ENST00000340417 CFAP45Q9UL16 551 aa14.87□□□□□ -0.03
LIN54-201ENST00000340417 GYG1P46976 350 aa14.87□□□□□ -0.03
LIN54-201ENST00000340417 PDE1AP54750 535 aa14.87□□□□□ -0.03
LIN54-201ENST00000340417 ARMT1Q9H993 441 aa14.87□□□□□ -0.03
LIN54-201ENST00000340417 SPDYE3A6NKU9 549 aa14.87□□□□□ -0.03
LIN54-201ENST00000340417 PABPC4Q13310 644 aaKnown RBP eCLIP14.87□□□□□ -0.03
LIN54-201ENST00000340417 DEFB132Q7Z7B7 95 aa14.87□□□□□ -0.03
LIN54-201ENST00000340417 A0A0U1RQG5 324 aaPredicted RBP14.87□□□□□ -0.03
LIN54-201ENST00000340417 K7ELQ4 463 aaPredicted RBP14.87□□□□□ -0.03
LIN54-201ENST00000340417 ZBTB43O43298 467 aa14.87□□□□□ -0.03
LIN54-201ENST00000340417 TGFBRAP1Q8WUH2 860 aa14.87□□□□□ -0.03
LIN54-201ENST00000340417 ARHGEF1Q92888 912 aaKnown RBP14.87□□□□□ -0.03
LIN54-201ENST00000340417 NAPAP54920 295 aa14.86□□□□□ -0.03
LIN54-201ENST00000340417 FILIP1LQ4L180 1135 aa14.86□□□□□ -0.03
LIN54-201ENST00000340417 DBNDD2Q9BQY9 259 aa14.86□□□□□ -0.03
LIN54-201ENST00000340417 KDRP35968 1356 aa14.86□□□□□ -0.03
LIN54-201ENST00000340417 ZBED4O75132 1171 aa14.86□□□□□ -0.03
LIN54-201ENST00000340417 NMIQ13287 307 aaPredicted RBP14.86□□□□□ -0.03
LIN54-201ENST00000340417 KIDINS220Q9ULH0 1771 aa14.86□□□□□ -0.03
LIN54-201ENST00000340417 RTN1Q16799 776 aa14.86□□□□□ -0.03
LIN54-201ENST00000340417 CCDC148Q8NFR7 591 aa14.86□□□□□ -0.03
LIN54-201ENST00000340417 NBPF7P0C2Y1 421 aaPredicted RBP14.86□□□□□ -0.03
LIN54-201ENST00000340417 HMGN5P82970 282 aaKnown RBP14.86□□□□□ -0.03
LIN54-201ENST00000340417 SUPT20HL1Q3ZLR7 823 aa14.86□□□□□ -0.03
LIN54-201ENST00000340417 GOPCQ9HD26 462 aa14.86□□□□□ -0.03
LIN54-201ENST00000340417 SH2B1Q9NRF2 756 aaPredicted RBP14.86□□□□□ -0.03
LIN54-201ENST00000340417 ZMYM4Q5VZL5 1548 aa14.86□□□□□ -0.03
LIN54-201ENST00000340417 KLF18A0A0U1RQI7 1052 aa14.85□□□□□ -0.03
LIN54-201ENST00000340417 BRPF1P55201 1214 aaPredicted RBP14.85□□□□□ -0.03
LIN54-201ENST00000340417 CLEC4GQ6UXB4 293 aa14.85□□□□□ -0.03
LIN54-201ENST00000340417 SLC5A4Q9NY91 659 aa14.85□□□□□ -0.03
LIN54-201ENST00000340417 GREM2Q9H772 168 aa14.85□□□□□ -0.03
LIN54-201ENST00000340417 CROCC2H7BZ55 1655 aa14.85□□□□□ -0.03
LIN54-201ENST00000340417 DRC1Q96MC2 740 aa14.85□□□□□ -0.03
LIN54-201ENST00000340417 SETD1BQ9UPS6 1966 aaKnown RBP14.85□□□□□ -0.03
LIN54-201ENST00000340417 CALM1P0DP23 149 aa14.85□□□□□ -0.03
LIN54-201ENST00000340417 CALM2P0DP24 149 aa14.85□□□□□ -0.03
LIN54-201ENST00000340417 CALM3P0DP25 149 aa14.85□□□□□ -0.03
LIN54-201ENST00000340417 SOS2Q07890 1332 aaPredicted RBP14.84□□□□□ -0.03
LIN54-201ENST00000340417 CLRN2A0PK11 232 aa14.84□□□□□ -0.03
LIN54-201ENST00000340417 PAGR1Q9BTK6 254 aa14.84□□□□□ -0.03
LIN54-201ENST00000340417 DACH1Q9UI36 760 aa14.84□□□□□ -0.03
LIN54-201ENST00000340417 RTL9Q8NET4 1388 aa14.84□□□□□ -0.03
LIN54-201ENST00000340417 SPATA32Q96LK8 384 aa14.84□□□□□ -0.03
LIN54-201ENST00000340417 PARP1P09874 1014 aaKnown RBP14.84□□□□□ -0.03
LIN54-201ENST00000340417 COL15A1P39059 1388 aa14.84□□□□□ -0.03
LIN54-201ENST00000340417 GPCPD1Q9NPB8 672 aa14.84□□□□□ -0.03
LIN54-201ENST00000340417 PRAMEF22A3QJZ6 481 aa14.84□□□□□ -0.03
LIN54-201ENST00000340417 HDAC1Q13547 482 aaPredicted RBP14.83□□□□□ -0.03
LIN54-201ENST00000340417 NCOA3Q9Y6Q9 1424 aa14.83□□□□□ -0.03
LIN54-201ENST00000340417 GRAPQ13588 217 aa14.83□□□□□ -0.04
LIN54-201ENST00000340417 GRAPLQ8TC17 118 aaPredicted RBP14.83□□□□□ -0.04
LIN54-201ENST00000340417 CPS1P31327 1500 aa14.83□□□□□ -0.04
LIN54-201ENST00000340417 SSH2Q76I76 1423 aa14.83□□□□□ -0.04
LIN54-201ENST00000340417 PDILTQ8N807 584 aa14.83□□□□□ -0.04
LIN54-201ENST00000340417 TCP11L1Q9NUJ3 509 aa14.83□□□□□ -0.04
LIN54-201ENST00000340417 ORC3Q9UBD5 711 aaPredicted RBP14.83□□□□□ -0.04
LIN54-201ENST00000340417 PDIA4P13667 645 aaKnown RBP14.83□□□□□ -0.04
LIN54-201ENST00000340417 PROSER3Q2NL68 480 aa14.83□□□□□ -0.04
LIN54-201ENST00000340417 CALML4Q96GE6 196 aa14.83□□□□□ -0.04
LIN54-201ENST00000340417 NUCB1Q02818 461 aa14.82□□□□□ -0.04
LIN54-201ENST00000340417 TNNQ9UQP3 1299 aa14.82□□□□□ -0.04
LIN54-201ENST00000340417 E9PCH4 1651 aa14.82□□□□□ -0.04
LIN54-201ENST00000340417 RBM8AQ9Y5S9 174 aaKnown RBP14.82□□□□□ -0.04
LIN54-201ENST00000340417 CARMIL3Q8ND23 1372 aa14.82□□□□□ -0.04
LIN54-201ENST00000340417 BCAMP50895 628 aa14.82□□□□□ -0.04
LIN54-201ENST00000340417 NLRP10Q86W26 655 aa14.82□□□□□ -0.04
LIN54-201ENST00000340417 C2orf69Q8N8R5 385 aa14.82□□□□□ -0.04
LIN54-201ENST00000340417 ERMNQ8TAM6 284 aa14.82□□□□□ -0.04
LIN54-201ENST00000340417 C6orf50Q9HD87 102 aa14.82□□□□□ -0.04
LIN54-201ENST00000340417 ADAMTS13Q76LX8 1427 aa14.82□□□□□ -0.04
LIN54-201ENST00000340417 SP4Q02446 784 aa14.82□□□□□ -0.04
LIN54-201ENST00000340417 CPXCR1Q8N123 301 aa14.82□□□□□ -0.04
LIN54-201ENST00000340417 LARP6Q9BRS8 491 aaKnown RBP14.82□□□□□ -0.04
LIN54-201ENST00000340417 UBE4AQ14139 1066 aa14.81□□□□□ -0.04
LIN54-201ENST00000340417 LRRC2Q9BYS8 371 aa14.81□□□□□ -0.04
LIN54-201ENST00000340417 LIMCH1Q9UPQ0 1083 aa14.81□□□□□ -0.04
LIN54-201ENST00000340417 PRC1O43663 620 aa14.81□□□□□ -0.04
LIN54-201ENST00000340417 SDSP20132 328 aa14.81□□□□□ -0.04
LIN54-201ENST00000340417 GRIPAP1Q4V328 841 aa14.81□□□□□ -0.04
LIN54-201ENST00000340417 SEC31BQ9NQW1 1179 aa14.81□□□□□ -0.04
LIN54-201ENST00000340417 HELLSQ9NRZ9 838 aa14.81□□□□□ -0.04
LIN54-201ENST00000340417 DESP17661 470 aa14.81□□□□□ -0.04
LIN54-201ENST00000340417 NCBP1Q09161 790 aaKnown RBP14.81□□□□□ -0.04
LIN54-201ENST00000340417 FERMT3Q86UX7 667 aa14.81□□□□□ -0.04
LIN54-201ENST00000340417 CDK12Q9NYV4 1490 aaPredicted RBP14.81□□□□□ -0.04
LIN54-201ENST00000340417 CCDC171Q6TFL3 1326 aa14.8□□□□□ -0.04
LIN54-201ENST00000340417 ZAP70P43403 619 aa14.8□□□□□ -0.04
LIN54-201ENST00000340417 SUSD4Q5VX71 490 aa14.8□□□□□ -0.04
LIN54-201ENST00000340417 MARCH10Q8NA82 808 aaPredicted RBP14.8□□□□□ -0.04
LIN54-201ENST00000340417 SPC25Q9HBM1 224 aa14.8□□□□□ -0.04
LIN54-201ENST00000340417 KDM2BQ8NHM5 1336 aa14.8□□□□□ -0.04
LIN54-201ENST00000340417 PTPDC1A2A3K4 754 aa14.8□□□□□ -0.04
LIN54-201ENST00000340417 USP17L3A6NCW0 530 aa14.8□□□□□ -0.04
LIN54-201ENST00000340417 USP17L4A6NCW7 530 aa14.8□□□□□ -0.04
LIN54-201ENST00000340417 USP17L1Q7RTZ2 530 aa14.8□□□□□ -0.04
LIN54-201ENST00000340417 BRF1Q92994 677 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms