RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.21■□□□□ 0.51
TUBB4B-201ENST00000340384 LPIN2Q92539 896 aa18.21■□□□□ 0.51
TUBB4B-201ENST00000340384 XAGE2Q96GT9 111 aa18.21■□□□□ 0.51
TUBB4B-201ENST00000340384 NEUROD6Q96NK8 337 aa18.21■□□□□ 0.51
TUBB4B-201ENST00000340384 IL25Q9H293 177 aa18.21■□□□□ 0.51
TUBB4B-201ENST00000340384 LEMD3Q9Y2U8 911 aa18.21■□□□□ 0.51
TUBB4B-201ENST00000340384 UFL1O94874 794 aa18.2■□□□□ 0.5
TUBB4B-201ENST00000340384 ZKSCAN1P17029 563 aaPredicted RBP18.2■□□□□ 0.5
TUBB4B-201ENST00000340384 DEKP35659 375 aaKnown RBP18.2■□□□□ 0.5
TUBB4B-201ENST00000340384 CCDC93Q567U6 631 aa18.2■□□□□ 0.5
TUBB4B-201ENST00000340384 RNF20Q5VTR2 975 aa18.2■□□□□ 0.5
TUBB4B-201ENST00000340384 DPP8Q6V1X1 898 aaPredicted RBP18.2■□□□□ 0.5
TUBB4B-201ENST00000340384 GGA1Q9UJY5 639 aa18.2■□□□□ 0.5
TUBB4B-201ENST00000340384 NFKBIEO00221 500 aa18.2■□□□□ 0.5
TUBB4B-201ENST00000340384 ATP2B4P23634 1241 aa18.2■□□□□ 0.5
TUBB4B-201ENST00000340384 KCNJ4P48050 445 aa18.2■□□□□ 0.5
TUBB4B-201ENST00000340384 PRELPP51888 382 aa18.2■□□□□ 0.5
TUBB4B-201ENST00000340384 LRRFIP1Q32MZ4 808 aaKnown RBP18.2■□□□□ 0.5
TUBB4B-201ENST00000340384 FAM84BQ96KN1 310 aaPredicted RBP18.2■□□□□ 0.5
TUBB4B-201ENST00000340384 SNX14Q9Y5W7 946 aa18.2■□□□□ 0.5
TUBB4B-201ENST00000340384 MED23Q9ULK4 1368 aa18.19■□□□□ 0.5
TUBB4B-201ENST00000340384 C15orf52Q6ZUT6 534 aaKnown RBP18.19■□□□□ 0.5
TUBB4B-201ENST00000340384 KCNB2Q92953 911 aa18.19■□□□□ 0.5
TUBB4B-201ENST00000340384 TM6SF1Q9BZW5 370 aa18.19■□□□□ 0.5
TUBB4B-201ENST00000340384 FOXD4L1Q9NU39 408 aa18.19■□□□□ 0.5
TUBB4B-201ENST00000340384 C6orf229H3BNL8 230 aa18.18■□□□□ 0.5
TUBB4B-201ENST00000340384 GYG1P46976 350 aa18.18■□□□□ 0.5
TUBB4B-201ENST00000340384 BCAMP50895 628 aa18.18■□□□□ 0.5
TUBB4B-201ENST00000340384 GSE1Q14687 1217 aa18.18■□□□□ 0.5
TUBB4B-201ENST00000340384 CCDC158Q5M9N0 1113 aa18.18■□□□□ 0.5
TUBB4B-201ENST00000340384 RTKN2Q8IZC4 609 aa18.18■□□□□ 0.5
TUBB4B-201ENST00000340384 INTS4Q96HW7 963 aaKnown RBP18.18■□□□□ 0.5
TUBB4B-201ENST00000340384 DNAJC2Q99543 621 aaKnown RBP18.18■□□□□ 0.5
TUBB4B-201ENST00000340384 GORABQ5T7V8 394 aa18.17■□□□□ 0.5
TUBB4B-201ENST00000340384 FBXO33Q7Z6M2 555 aa18.17■□□□□ 0.5
TUBB4B-201ENST00000340384 KBTBD3Q8NAB2 608 aa18.17■□□□□ 0.5
TUBB4B-201ENST00000340384 MAP4K1Q92918 833 aa18.17■□□□□ 0.5
TUBB4B-201ENST00000340384 TMX3Q96JJ7 454 aa18.17■□□□□ 0.5
TUBB4B-201ENST00000340384 PSMD1Q99460 953 aa18.17■□□□□ 0.5
TUBB4B-201ENST00000340384 ARFGEF1Q9Y6D6 1849 aa18.17■□□□□ 0.5
TUBB4B-201ENST00000340384 GOLGA6L22H0YM25 854 aa18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 SLC5A1P13866 664 aa18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 PSMA5P28066 241 aa18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 PHKA1P46020 1223 aa18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 CUL4AQ13619 759 aa18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 TNPO1Q92973 898 aaKnown RBP18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 FAM227BQ96M60 508 aa18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 HMG20BQ9P0W2 317 aa18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 FER1L6Q2WGJ9 1857 aa18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 COL4A5P29400 1685 aa18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 RIMBP2O15034 1052 aa18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 IFIT1P09914 478 aaKnown RBP18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 FKBP4Q02790 459 aaKnown RBP eCLIP18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 SOGA3Q5TF21 947 aa18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 CCDC102BQ68D86 513 aa18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 TMX4Q9H1E5 349 aaPredicted RBP18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 PAG1Q9NWQ8 432 aa18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 RBM8AQ9Y5S9 174 aaKnown RBP18.16■□□□□ 0.5
TUBB4B-201ENST00000340384 ARAP2Q8WZ64 1704 aa18.15■□□□□ 0.5
TUBB4B-201ENST00000340384 A0A0D9SFI3 127 aa18.15■□□□□ 0.5
TUBB4B-201ENST00000340384 PTH1RQ03431 593 aa18.15■□□□□ 0.5
TUBB4B-201ENST00000340384 SCARF1Q14162 830 aa18.15■□□□□ 0.5
TUBB4B-201ENST00000340384 NECTIN1Q15223 517 aa18.15■□□□□ 0.5
TUBB4B-201ENST00000340384 WASHC4Q2M389 1173 aa18.15■□□□□ 0.5
TUBB4B-201ENST00000340384 GRIPAP1Q4V328 841 aa18.15■□□□□ 0.5
TUBB4B-201ENST00000340384 ZNF277Q9NRM2 450 aaPredicted RBP18.15■□□□□ 0.5
TUBB4B-201ENST00000340384 RASSF7Q02833 373 aa18.14■□□□□ 0.49
TUBB4B-201ENST00000340384 MCMDC2Q4G0Z9 681 aa18.14■□□□□ 0.49
TUBB4B-201ENST00000340384 TTC39AQ5SRH9 613 aa18.14■□□□□ 0.49
TUBB4B-201ENST00000340384 CLEC17AQ6ZS10 378 aa18.14■□□□□ 0.49
TUBB4B-201ENST00000340384 UPF3BQ9BZI7 483 aaKnown RBP18.14■□□□□ 0.49
TUBB4B-201ENST00000340384 HELLSQ9NRZ9 838 aa18.14■□□□□ 0.49
TUBB4B-201ENST00000340384 CYP46A1Q9Y6A2 500 aa18.14■□□□□ 0.49
TUBB4B-201ENST00000340384 KIAA2012Q0VF49 1180 aa18.13■□□□□ 0.49
TUBB4B-201ENST00000340384 KRT32Q14532 448 aa18.13■□□□□ 0.49
TUBB4B-201ENST00000340384 AOC3Q16853 763 aa18.13■□□□□ 0.49
TUBB4B-201ENST00000340384 CREB3L3Q68CJ9 461 aa18.13■□□□□ 0.49
TUBB4B-201ENST00000340384 LTBP3Q9NS15 1303 aa18.13■□□□□ 0.49
TUBB4B-201ENST00000340384 HIBADHP31937 336 aaKnown RBP18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 VPS53Q5VIR6 699 aa18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 PI16Q6UXB8 463 aa18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 ZC3H12CQ9C0D7 883 aaKnown RBP18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 TAOK3Q9H2K8 898 aa18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 NDUFB9Q9Y6M9 179 aa18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 U3KPZ7 1027 aaPredicted RBP18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 GOLIM4O00461 696 aa18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 CASTP20810 708 aaKnown RBP18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 ARID4AP29374 1257 aaPredicted RBP18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 DOK7Q18PE1 504 aa18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 SKOR2Q2VWA4 1001 aaPredicted RBP18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 ARHGAP27Q6ZUM4 889 aa18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 RASEFQ8IZ41 740 aa18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 ZSCAN31Q96LW9 406 aaPredicted RBP18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 JAKMIP1Q96N16 626 aaKnown RBP18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 TTC14Q96N46 770 aa18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 ZSWIM6Q9HCJ5 1215 aa18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 CD209Q9NNX6 404 aa18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 KCNQ5Q9NR82 932 aa18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 IQSEC3Q9UPP2 1182 aaPredicted RBP18.12■□□□□ 0.49
TUBB4B-201ENST00000340384 ZFYP08048 801 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms