RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 KIF5BP33176 963 aa16.92■□□□□ 0.3
RET-201ENST00000340058 ZSWIM4Q9H7M6 989 aa16.92■□□□□ 0.3
RET-201ENST00000340058 HELLSQ9NRZ9 838 aa16.92■□□□□ 0.3
RET-201ENST00000340058 AATFQ9NY61 560 aaKnown RBP eCLIP16.92■□□□□ 0.3
RET-201ENST00000340058 NPHP4O75161 1426 aaPredicted RBP16.92■□□□□ 0.3
RET-201ENST00000340058 EPB41L2O43491 1005 aaKnown RBP16.92■□□□□ 0.3
RET-201ENST00000340058 SASH1O94885 1247 aa16.92■□□□□ 0.3
RET-201ENST00000340058 ST5P78524 1137 aa16.92■□□□□ 0.3
RET-201ENST00000340058 RRAGDQ9NQL2 400 aaPredicted RBP16.91■□□□□ 0.3
RET-201ENST00000340058 E7EWF7 191 aa16.91■□□□□ 0.3
RET-201ENST00000340058 SPTY2D1Q68D10 685 aaPredicted RBP16.91■□□□□ 0.3
RET-201ENST00000340058 KCNG4Q8TDN1 519 aa16.91■□□□□ 0.3
RET-201ENST00000340058 CNNM2Q9H8M5 875 aa16.91■□□□□ 0.3
RET-201ENST00000340058 PHKA1P46020 1223 aa16.91■□□□□ 0.3
RET-201ENST00000340058 GPS2Q13227 327 aa16.91■□□□□ 0.3
RET-201ENST00000340058 TMEM132AQ24JP5 1023 aa16.91■□□□□ 0.3
RET-201ENST00000340058 TRAPPC3LQ5T215 181 aa16.9■□□□□ 0.3
RET-201ENST00000340058 CABP5Q9NP86 173 aa16.9■□□□□ 0.3
RET-201ENST00000340058 SEPT11Q9NVA2 429 aaKnown RBP16.9■□□□□ 0.3
RET-201ENST00000340058 MADDQ8WXG6 1647 aa16.9■□□□□ 0.3
RET-201ENST00000340058 BRD1O95696 1058 aa16.9■□□□□ 0.3
RET-201ENST00000340058 PTGS1P23219 599 aa16.9■□□□□ 0.3
RET-201ENST00000340058 SEC31BQ9NQW1 1179 aa16.9■□□□□ 0.3
RET-201ENST00000340058 ADD1P35611 737 aaKnown RBP16.9■□□□□ 0.3
RET-201ENST00000340058 CNBD1Q8NA66 436 aa16.9■□□□□ 0.3
RET-201ENST00000340058 UNC13BO14795 1591 aa16.9■□□□□ 0.3
RET-201ENST00000340058 E9PCH4 1651 aa16.9■□□□□ 0.3
RET-201ENST00000340058 IGKV5-2P06315 115 aa16.89■□□□□ 0.3
RET-201ENST00000340058 LDHBP07195 334 aaKnown RBP16.89■□□□□ 0.3
RET-201ENST00000340058 SDR42E1Q8WUS8 393 aa16.89■□□□□ 0.3
RET-201ENST00000340058 KCNJ14Q9UNX9 436 aa16.89■□□□□ 0.3
RET-201ENST00000340058 AOX1Q06278 1338 aa16.89■□□□□ 0.29
RET-201ENST00000340058 LPIN2Q92539 896 aa16.89■□□□□ 0.29
RET-201ENST00000340058 FEZ1Q99689 392 aa16.89■□□□□ 0.29
RET-201ENST00000340058 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.89■□□□□ 0.29
RET-201ENST00000340058 V9GY48 417 aaPredicted RBP16.89■□□□□ 0.29
RET-201ENST00000340058 V9GYY5 206 aaPredicted RBP16.89■□□□□ 0.29
RET-201ENST00000340058 MCM7P33993 719 aa16.89■□□□□ 0.29
RET-201ENST00000340058 CTSWP56202 376 aa16.89■□□□□ 0.29
RET-201ENST00000340058 LSG1Q9H089 658 aaKnown RBP16.89■□□□□ 0.29
RET-201ENST00000340058 ANGEL1Q9UNK9 670 aaKnown RBP16.89■□□□□ 0.29
RET-201ENST00000340058 TRIM75PA6NK02 468 aa16.89■□□□□ 0.29
RET-201ENST00000340058 HSPD1P10809 573 aaKnown RBP16.89■□□□□ 0.29
RET-201ENST00000340058 HIBADHP31937 336 aaKnown RBP16.89■□□□□ 0.29
RET-201ENST00000340058 CHMP4BP1P59074 171 aa16.89■□□□□ 0.29
RET-201ENST00000340058 SPATA5Q8NB90 893 aa16.89■□□□□ 0.29
RET-201ENST00000340058 STAP2Q9UGK3 403 aa16.89■□□□□ 0.29
RET-201ENST00000340058 GLI2P10070 1586 aa16.88■□□□□ 0.29
RET-201ENST00000340058 CDK12Q9NYV4 1490 aaPredicted RBP16.88■□□□□ 0.29
RET-201ENST00000340058 UFL1O94874 794 aa16.88■□□□□ 0.29
RET-201ENST00000340058 ZNF174Q15697 407 aa16.88■□□□□ 0.29
RET-201ENST00000340058 ALKQ9UM73 1620 aa16.88■□□□□ 0.29
RET-201ENST00000340058 TNNT3P45378 269 aaPredicted RBP16.88■□□□□ 0.29
RET-201ENST00000340058 RBM26Q5T8P6 1007 aaKnown RBP16.88■□□□□ 0.29
RET-201ENST00000340058 BRINP3Q76B58 766 aa16.88■□□□□ 0.29
RET-201ENST00000340058 LEO1Q8WVC0 666 aaPredicted RBP16.88■□□□□ 0.29
RET-201ENST00000340058 PIGBQ92521 554 aa16.88■□□□□ 0.29
RET-201ENST00000340058 COPRSQ9NQ92 184 aa16.88■□□□□ 0.29
RET-201ENST00000340058 TCP11L1Q9NUJ3 509 aa16.88■□□□□ 0.29
RET-201ENST00000340058 FGAP02671 866 aa16.88■□□□□ 0.29
RET-201ENST00000340058 UBASH3AP57075 661 aa16.88■□□□□ 0.29
RET-201ENST00000340058 LOC102724428A0A0B4J2F2 783 aa16.87■□□□□ 0.29
RET-201ENST00000340058 SIK1P57059 783 aa16.87■□□□□ 0.29
RET-201ENST00000340058 PTPN12Q05209 780 aaKnown RBP16.87■□□□□ 0.29
RET-201ENST00000340058 HSP90B2PQ58FF3 399 aa16.87■□□□□ 0.29
RET-201ENST00000340058 KIAA1328Q86T90 577 aa16.87■□□□□ 0.29
RET-201ENST00000340058 STAMQ92783 540 aa16.87■□□□□ 0.29
RET-201ENST00000340058 LARGE1O95461 756 aa16.87■□□□□ 0.29
RET-201ENST00000340058 SKILP12757 684 aa16.87■□□□□ 0.29
RET-201ENST00000340058 FAM47AQ5JRC9 791 aa16.87■□□□□ 0.29
RET-201ENST00000340058 WDR78Q5VTH9 848 aa16.87■□□□□ 0.29
RET-201ENST00000340058 TMTC2Q8N394 836 aa16.87■□□□□ 0.29
RET-201ENST00000340058 NUP88Q99567 741 aaPredicted RBP16.87■□□□□ 0.29
RET-201ENST00000340058 LIG1P18858 919 aa16.87■□□□□ 0.29
RET-201ENST00000340058 KIF24Q5T7B8 1368 aa16.87■□□□□ 0.29
RET-201ENST00000340058 ABCA6Q8N139 1617 aa16.86■□□□□ 0.29
RET-201ENST00000340058 CFAP74Q9C0B2 1584 aa16.86■□□□□ 0.29
RET-201ENST00000340058 A0A087WWV3 80 aa16.86■□□□□ 0.29
RET-201ENST00000340058 CYP21A2P08686 494 aa16.86■□□□□ 0.29
RET-201ENST00000340058 IBSPP21815 317 aaPredicted RBP16.86■□□□□ 0.29
RET-201ENST00000340058 NAPAP54920 295 aa16.86■□□□□ 0.29
RET-201ENST00000340058 UBXN4Q92575 508 aa16.86■□□□□ 0.29
RET-201ENST00000340058 PRDM10Q9NQV6 1147 aa16.86■□□□□ 0.29
RET-201ENST00000340058 SHROOM2Q13796 1616 aa16.86■□□□□ 0.29
RET-201ENST00000340058 PARP10Q53GL7 1025 aa16.86■□□□□ 0.29
RET-201ENST00000340058 SMIM5Q71RC9 77 aa16.86■□□□□ 0.29
RET-201ENST00000340058 NYXQ9GZU5 481 aa16.86■□□□□ 0.29
RET-201ENST00000340058 GPHNQ9NQX3 736 aaPredicted RBP16.86■□□□□ 0.29
RET-201ENST00000340058 MAPK8IP1Q9UQF2 711 aa16.86■□□□□ 0.29
RET-201ENST00000340058 N4BP3O15049 544 aa16.86■□□□□ 0.29
RET-201ENST00000340058 SLF2Q8IX21 1173 aa16.86■□□□□ 0.29
RET-201ENST00000340058 ZBTB38Q8NAP3 1195 aaPredicted RBP16.86■□□□□ 0.29
RET-201ENST00000340058 TULP4Q9NRJ4 1543 aa16.86■□□□□ 0.29
RET-201ENST00000340058 MTIF2P46199 727 aaKnown RBP16.85■□□□□ 0.29
RET-201ENST00000340058 NOLC1Q14978 699 aaKnown RBP eCLIP16.85■□□□□ 0.29
RET-201ENST00000340058 CCDC178Q5BJE1 867 aa16.85■□□□□ 0.29
RET-201ENST00000340058 CARD10Q9BWT7 1032 aa16.85■□□□□ 0.29
RET-201ENST00000340058 PDCL3Q9H2J4 239 aa16.85■□□□□ 0.29
RET-201ENST00000340058 USP21Q9UK80 565 aa16.85■□□□□ 0.29
RET-201ENST00000340058 ZKSCAN5Q9Y2L8 839 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms