RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 hCG_1642624A0A1W2PR95 340 aa16.32■□□□□ 0.2
PCDH8-201ENST00000338862 ATP5JP18859 108 aa16.32■□□□□ 0.2
PCDH8-201ENST00000338862 METAP2P50579 478 aaKnown RBP eCLIP16.32■□□□□ 0.2
PCDH8-201ENST00000338862 SLC4A8Q2Y0W8 1093 aa16.32■□□□□ 0.2
PCDH8-201ENST00000338862 METTL24Q5JXM2 366 aa16.32■□□□□ 0.2
PCDH8-201ENST00000338862 MRFAP1L1Q96HT8 127 aa16.32■□□□□ 0.2
PCDH8-201ENST00000338862 HINFPQ9BQA5 517 aa16.32■□□□□ 0.2
PCDH8-201ENST00000338862 PFKFB1P16118 471 aa16.32■□□□□ 0.2
PCDH8-201ENST00000338862 AKAP17AQ02040 695 aaKnown RBP16.32■□□□□ 0.2
PCDH8-201ENST00000338862 PTPN12Q05209 780 aaKnown RBP16.32■□□□□ 0.2
PCDH8-201ENST00000338862 LONRF3Q496Y0 759 aa16.32■□□□□ 0.2
PCDH8-201ENST00000338862 GPIHBP1Q8IV16 184 aa16.32■□□□□ 0.2
PCDH8-201ENST00000338862 CCDC102AQ96A19 550 aa16.32■□□□□ 0.2
PCDH8-201ENST00000338862 METTL22Q9BUU2 404 aaPredicted RBP16.32■□□□□ 0.2
PCDH8-201ENST00000338862 INCENPQ9NQS7 918 aa16.32■□□□□ 0.2
PCDH8-201ENST00000338862 GPS2Q13227 327 aa16.31■□□□□ 0.2
PCDH8-201ENST00000338862 DHX40Q8IX18 779 aaKnown RBP16.31■□□□□ 0.2
PCDH8-201ENST00000338862 CCDC150Q8NCX0 1101 aa16.31■□□□□ 0.2
PCDH8-201ENST00000338862 FANCLQ9NW38 375 aa16.31■□□□□ 0.2
PCDH8-201ENST00000338862 RCOR1Q9UKL0 485 aa16.31■□□□□ 0.2
PCDH8-201ENST00000338862 MYO5BQ9ULV0 1848 aa16.31■□□□□ 0.2
PCDH8-201ENST00000338862 KDRP35968 1356 aa16.31■□□□□ 0.2
PCDH8-201ENST00000338862 CTIFO43310 598 aaKnown RBP16.31■□□□□ 0.2
PCDH8-201ENST00000338862 PFKFB2O60825 505 aa16.31■□□□□ 0.2
PCDH8-201ENST00000338862 TTLL7Q6ZT98 887 aa16.31■□□□□ 0.2
PCDH8-201ENST00000338862 KCNG4Q8TDN1 519 aa16.31■□□□□ 0.2
PCDH8-201ENST00000338862 FAM89AQ96GI7 184 aa16.31■□□□□ 0.2
PCDH8-201ENST00000338862 SIGLEC1Q9BZZ2 1709 aa16.31■□□□□ 0.2
PCDH8-201ENST00000338862 B4E1Z4 1266 aa16.31■□□□□ 0.2
PCDH8-201ENST00000338862 SNRPA1P09661 255 aaKnown RBP16.31■□□□□ 0.2
PCDH8-201ENST00000338862 KIF4BQ2VIQ3 1234 aa16.31■□□□□ 0.2
PCDH8-201ENST00000338862 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.31■□□□□ 0.2
PCDH8-201ENST00000338862 CLCN6P51797 869 aa16.3■□□□□ 0.2
PCDH8-201ENST00000338862 ANO1Q5XXA6 986 aa16.3■□□□□ 0.2
PCDH8-201ENST00000338862 GRAMD1CQ8IYS0 662 aa16.3■□□□□ 0.2
PCDH8-201ENST00000338862 JMYQ8N9B5 988 aa16.3■□□□□ 0.2
PCDH8-201ENST00000338862 TMEM232C9JQI7 657 aa16.3■□□□□ 0.2
PCDH8-201ENST00000338862 KIF2AO00139 706 aaPredicted RBP16.3■□□□□ 0.2
PCDH8-201ENST00000338862 RNF113AO15541 343 aaKnown RBP16.3■□□□□ 0.2
PCDH8-201ENST00000338862 RHOXF2BP0C7M4 288 aa16.3■□□□□ 0.2
PCDH8-201ENST00000338862 ADORA1P30542 326 aa16.3■□□□□ 0.2
PCDH8-201ENST00000338862 MYSM1Q5VVJ2 828 aa16.3■□□□□ 0.2
PCDH8-201ENST00000338862 RHOXF2Q9BQY4 288 aa16.3■□□□□ 0.2
PCDH8-201ENST00000338862 AXIN2Q9Y2T1 843 aa16.3■□□□□ 0.2
PCDH8-201ENST00000338862 TERF2Q15554 542 aa16.3■□□□□ 0.2
PCDH8-201ENST00000338862 SLC9C2Q5TAH2 1124 aa16.3■□□□□ 0.2
PCDH8-201ENST00000338862 PPFIBP1Q86W92 1011 aa16.3■□□□□ 0.2
PCDH8-201ENST00000338862 PROSER2Q86WR7 435 aaPredicted RBP16.3■□□□□ 0.2
PCDH8-201ENST00000338862 NCOA7Q8NI08 942 aa16.3■□□□□ 0.2
PCDH8-201ENST00000338862 PCMTD1Q96MG8 357 aaPredicted RBP16.3■□□□□ 0.2
PCDH8-201ENST00000338862 IFT172Q9UG01 1749 aa16.3■□□□□ 0.2
PCDH8-201ENST00000338862 GOLGA8AA7E2F4 631 aa16.29■□□□□ 0.2
PCDH8-201ENST00000338862 IARSP41252 1262 aaKnown RBP16.29■□□□□ 0.2
PCDH8-201ENST00000338862 CCZ1BP86790 482 aa16.29■□□□□ 0.2
PCDH8-201ENST00000338862 CCZ1P86791 482 aaPredicted RBP16.29■□□□□ 0.2
PCDH8-201ENST00000338862 CCDC102BQ68D86 513 aa16.29■□□□□ 0.2
PCDH8-201ENST00000338862 MINDY4BA8MYZ0 360 aa16.29■□□□□ 0.2
PCDH8-201ENST00000338862 IFIT3O14879 490 aaKnown RBP16.29■□□□□ 0.2
PCDH8-201ENST00000338862 DPF2Q92785 391 aa16.29■□□□□ 0.2
PCDH8-201ENST00000338862 KCNJ14Q9UNX9 436 aa16.29■□□□□ 0.2
PCDH8-201ENST00000338862 CBFA2T2O43439 604 aa16.29■□□□□ 0.2
PCDH8-201ENST00000338862 PPARDQ03181 441 aa16.29■□□□□ 0.2
PCDH8-201ENST00000338862 LRRFIP1Q32MZ4 808 aaKnown RBP16.29■□□□□ 0.2
PCDH8-201ENST00000338862 NAA16Q6N069 864 aaPredicted RBP16.29■□□□□ 0.2
PCDH8-201ENST00000338862 ARMCX5Q6P1M9 558 aa16.29■□□□□ 0.2
PCDH8-201ENST00000338862 M0R2C6 588 aa16.28■□□□□ 0.2
PCDH8-201ENST00000338862 CTDNEP1O95476 244 aa16.28■□□□□ 0.2
PCDH8-201ENST00000338862 ZAP70P43403 619 aa16.28■□□□□ 0.2
PCDH8-201ENST00000338862 E4F1Q66K89 784 aaPredicted RBP16.28■□□□□ 0.2
PCDH8-201ENST00000338862 ADALQ6DHV7 355 aa16.28■□□□□ 0.2
PCDH8-201ENST00000338862 OSBP2Q969R2 916 aa16.28■□□□□ 0.2
PCDH8-201ENST00000338862 CWC25Q9NXE8 425 aaPredicted RBP16.28■□□□□ 0.2
PCDH8-201ENST00000338862 DENND2AQ9ULE3 1009 aa16.28■□□□□ 0.2
PCDH8-201ENST00000338862 TMEM67Q5HYA8 995 aa16.28■□□□□ 0.2
PCDH8-201ENST00000338862 KRT28Q7Z3Y7 464 aa16.28■□□□□ 0.2
PCDH8-201ENST00000338862 C10orf67Q8IYJ2 551 aa16.28■□□□□ 0.2
PCDH8-201ENST00000338862 GDAP1L1Q96MZ0 367 aa16.28■□□□□ 0.2
PCDH8-201ENST00000338862 FGAP02671 866 aa16.28■□□□□ 0.2
PCDH8-201ENST00000338862 GABPB1Q06547 395 aaPredicted RBP16.28■□□□□ 0.2
PCDH8-201ENST00000338862 AIDAQ96BJ3 306 aa16.28■□□□□ 0.2
PCDH8-201ENST00000338862 DLG5Q8TDM6 1919 aa16.28■□□□□ 0.2
PCDH8-201ENST00000338862 RIMS1Q86UR5 1692 aaKnown RBP16.27■□□□□ 0.2
PCDH8-201ENST00000338862 ZSCAN12O43309 604 aa16.27■□□□□ 0.2
PCDH8-201ENST00000338862 HOXB7P09629 217 aa16.27■□□□□ 0.2
PCDH8-201ENST00000338862 LDHAL6AQ6ZMR3 332 aa16.27■□□□□ 0.2
PCDH8-201ENST00000338862 TRIM34Q9BYJ4 488 aa16.27■□□□□ 0.2
PCDH8-201ENST00000338862 RABEP2Q9H5N1 569 aa16.27■□□□□ 0.2
PCDH8-201ENST00000338862 MAPK8IP1Q9UQF2 711 aa16.27■□□□□ 0.2
PCDH8-201ENST00000338862 OVOS2A0A0J9YW53 1432 aa16.27■□□□□ 0.2
PCDH8-201ENST00000338862 OVOS2Q6IE36 1432 aa16.27■□□□□ 0.2
PCDH8-201ENST00000338862 TOM1L2Q6ZVM7 507 aa16.27■□□□□ 0.19
PCDH8-201ENST00000338862 LINC00301Q8NCQ3 95 aa16.27■□□□□ 0.19
PCDH8-201ENST00000338862 HAUS7Q99871 368 aa16.27■□□□□ 0.19
PCDH8-201ENST00000338862 CALCOCO1Q9P1Z2 691 aa16.27■□□□□ 0.19
PCDH8-201ENST00000338862 CARMIL3Q8ND23 1372 aa16.27■□□□□ 0.19
PCDH8-201ENST00000338862 ETF1P62495 437 aaKnown RBP16.27■□□□□ 0.19
PCDH8-201ENST00000338862 MYL5Q02045 173 aa16.27■□□□□ 0.19
PCDH8-201ENST00000338862 FKBP15Q5T1M5 1219 aa16.27■□□□□ 0.19
PCDH8-201ENST00000338862 KRBA2Q6ZNG9 492 aa16.27■□□□□ 0.19
PCDH8-201ENST00000338862 IRX2Q9BZI1 471 aaPredicted RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms