RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 ZNF165P49910 485 aa16.32■□□□□ 0.2
PARVB-201ENST00000338758 PAF1Q8N7H5 531 aa16.32■□□□□ 0.2
PARVB-201ENST00000338758 USP25Q9UHP3 1055 aa16.32■□□□□ 0.2
PARVB-201ENST00000338758 RTL9Q8NET4 1388 aa16.32■□□□□ 0.2
PARVB-201ENST00000338758 IL6STP40189 918 aaPredicted RBP16.32■□□□□ 0.2
PARVB-201ENST00000338758 AOX1Q06278 1338 aa16.31■□□□□ 0.2
PARVB-201ENST00000338758 F13A1P00488 732 aa16.31■□□□□ 0.2
PARVB-201ENST00000338758 KCNG4Q8TDN1 519 aa16.31■□□□□ 0.2
PARVB-201ENST00000338758 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.31■□□□□ 0.27e-7■■■■■ 252.6
PARVB-201ENST00000338758 AXIN2Q9Y2T1 843 aa16.31■□□□□ 0.2
PARVB-201ENST00000338758 FKBP15Q5T1M5 1219 aa16.31■□□□□ 0.2
PARVB-201ENST00000338758 SMARCC2Q8TAQ2 1214 aa16.31■□□□□ 0.2
PARVB-201ENST00000338758 TRIM75PA6NK02 468 aa16.31■□□□□ 0.2
PARVB-201ENST00000338758 SLC27A2O14975 620 aa16.31■□□□□ 0.2
PARVB-201ENST00000338758 ATP5JP18859 108 aa16.31■□□□□ 0.2
PARVB-201ENST00000338758 LRRC24Q50LG9 513 aa16.31■□□□□ 0.2
PARVB-201ENST00000338758 KDM2BQ8NHM5 1336 aa16.31■□□□□ 0.2
PARVB-201ENST00000338758 SYNMO15061 1565 aa16.31■□□□□ 0.2
PARVB-201ENST00000338758 BMP15O95972 392 aa16.31■□□□□ 0.2
PARVB-201ENST00000338758 RAB3GAP1Q15042 981 aa16.31■□□□□ 0.2
PARVB-201ENST00000338758 C6orf50Q9HD87 102 aa16.31■□□□□ 0.2
PARVB-201ENST00000338758 ZNF532Q9HCE3 1301 aa16.31■□□□□ 0.2
PARVB-201ENST00000338758 CALML3P27482 149 aa16.3■□□□□ 0.2
PARVB-201ENST00000338758 LMOD1P29536 600 aaPredicted RBP16.3■□□□□ 0.2
PARVB-201ENST00000338758 ALDH1B1P30837 517 aa16.3■□□□□ 0.2
PARVB-201ENST00000338758 TNNI2P48788 182 aa16.3■□□□□ 0.2
PARVB-201ENST00000338758 GIMAP6Q6P9H5 292 aa16.3■□□□□ 0.2
PARVB-201ENST00000338758 FLAD1Q8NFF5 587 aa16.3■□□□□ 0.2
PARVB-201ENST00000338758 RRP36Q96EU6 259 aaKnown RBP16.3■□□□□ 0.2
PARVB-201ENST00000338758 RNF123Q5XPI4 1314 aa16.3■□□□□ 0.2
PARVB-201ENST00000338758 ADGRL3Q9HAR2 1447 aa16.3■□□□□ 0.2
PARVB-201ENST00000338758 IQGAP3Q86VI3 1631 aa16.3■□□□□ 0.2
PARVB-201ENST00000338758 PIGBQ92521 554 aa16.3■□□□□ 0.2
PARVB-201ENST00000338758 KLHL40Q2TBA0 621 aa16.3■□□□□ 0.2
PARVB-201ENST00000338758 UNC5CLQ8IV45 518 aa16.3■□□□□ 0.2
PARVB-201ENST00000338758 GYG1P46976 350 aa16.3■□□□□ 0.2
PARVB-201ENST00000338758 EIF6P56537 245 aaKnown RBP16.3■□□□□ 0.2
PARVB-201ENST00000338758 CLASP1Q7Z460 1538 aa16.3■□□□□ 0.2
PARVB-201ENST00000338758 AFMP43652 599 aa16.29■□□□□ 0.2
PARVB-201ENST00000338758 PLS1Q14651 629 aa16.29■□□□□ 0.2
PARVB-201ENST00000338758 ENOX2Q16206 610 aaKnown RBP16.29■□□□□ 0.2
PARVB-201ENST00000338758 ARHGAP29Q52LW3 1261 aa16.29■□□□□ 0.2
PARVB-201ENST00000338758 CACNA2D4Q7Z3S7 1137 aa16.29■□□□□ 0.2
PARVB-201ENST00000338758 GREM2Q9H772 168 aa16.29■□□□□ 0.2
PARVB-201ENST00000338758 TOP1P11387 765 aaKnown RBP16.29■□□□□ 0.2
PARVB-201ENST00000338758 GTF2IP78347 998 aa16.29■□□□□ 0.2
PARVB-201ENST00000338758 TCERG1LQ5VWI1 586 aa16.29■□□□□ 0.2
PARVB-201ENST00000338758 USP48Q86UV5 1035 aa16.29■□□□□ 0.2
PARVB-201ENST00000338758 TRMT2AQ8IZ69 625 aaKnown RBP16.29■□□□□ 0.2
PARVB-201ENST00000338758 CYP27B1O15528 508 aa16.29■□□□□ 0.2
PARVB-201ENST00000338758 RXRBP28702 533 aa16.29■□□□□ 0.2
PARVB-201ENST00000338758 HSP90B2PQ58FF3 399 aa16.29■□□□□ 0.2
PARVB-201ENST00000338758 KANK3Q6NY19 840 aa16.29■□□□□ 0.2
PARVB-201ENST00000338758 TXLNBQ8N3L3 684 aa16.29■□□□□ 0.2
PARVB-201ENST00000338758 ZNF397Q8NF99 534 aaPredicted RBP16.29■□□□□ 0.2
PARVB-201ENST00000338758 CLTCL1P53675 1640 aa16.29■□□□□ 0.2
PARVB-201ENST00000338758 FGFR1OPO95684 399 aaKnown RBP16.28■□□□□ 0.2
PARVB-201ENST00000338758 KRT27Q7Z3Y8 459 aa16.28■□□□□ 0.2
PARVB-201ENST00000338758 CPLX3Q8WVH0 158 aa16.28■□□□□ 0.2
PARVB-201ENST00000338758 PYM1Q9BRP8 204 aaKnown RBP16.28■□□□□ 0.2
PARVB-201ENST00000338758 MTIF2P46199 727 aaKnown RBP16.28■□□□□ 0.2
PARVB-201ENST00000338758 NLGN1Q8N2Q7 840 aa16.28■□□□□ 0.2
PARVB-201ENST00000338758 SPDYE3A6NKU9 549 aa16.28■□□□□ 0.2
PARVB-201ENST00000338758 MRPS27Q92552 414 aaKnown RBP16.28■□□□□ 0.2
PARVB-201ENST00000338758 RPS6KB1P23443 525 aa16.28■□□□□ 0.2
PARVB-201ENST00000338758 STX1AQ16623 288 aa16.28■□□□□ 0.2
PARVB-201ENST00000338758 KIAA1328Q86T90 577 aa16.28■□□□□ 0.2
PARVB-201ENST00000338758 ERMNQ8TAM6 284 aa16.28■□□□□ 0.2
PARVB-201ENST00000338758 SNX14Q9Y5W7 946 aa16.28■□□□□ 0.2
PARVB-201ENST00000338758 PPIP5K2O43314 1243 aa16.28■□□□□ 0.2
PARVB-201ENST00000338758 ZNF853P0CG23 659 aa16.28■□□□□ 0.2
PARVB-201ENST00000338758 RDXP35241 583 aaKnown RBP16.28■□□□□ 0.2
PARVB-201ENST00000338758 ZNF772Q68DY9 489 aaPredicted RBP16.28■□□□□ 0.2
PARVB-201ENST00000338758 SEPT12Q8IYM1 358 aa16.28■□□□□ 0.2
PARVB-201ENST00000338758 DACT1Q9NYF0 836 aa16.28■□□□□ 0.2
PARVB-201ENST00000338758 RNF17Q9BXT8 1623 aaKnown RBP16.27■□□□□ 0.2
PARVB-201ENST00000338758 ESPNB1AK53 854 aa16.27■□□□□ 0.2
PARVB-201ENST00000338758 SPTLC2O15270 562 aa16.27■□□□□ 0.2
PARVB-201ENST00000338758 ECM2O94769 699 aaPredicted RBP16.27■□□□□ 0.2
PARVB-201ENST00000338758 PDE6BP35913 854 aa16.27■□□□□ 0.2
PARVB-201ENST00000338758 MFSD14BQ5SR56 506 aa16.27■□□□□ 0.2
PARVB-201ENST00000338758 MAPKAPK5Q8IW41 473 aa16.27■□□□□ 0.2
PARVB-201ENST00000338758 MAST3O60307 1309 aa16.27■□□□□ 0.2
PARVB-201ENST00000338758 PRKCSHP14314 528 aaPredicted RBP16.27■□□□□ 0.2
PARVB-201ENST00000338758 TCP10Q12799 353 aa16.27■□□□□ 0.2
PARVB-201ENST00000338758 CCDC181Q5TID7 509 aa16.27■□□□□ 0.2
PARVB-201ENST00000338758 BCAMP50895 628 aa16.27■□□□□ 0.19
PARVB-201ENST00000338758 ACBD3Q9H3P7 528 aa16.27■□□□□ 0.19
PARVB-201ENST00000338758 ANGEL1Q9UNK9 670 aaKnown RBP16.27■□□□□ 0.19
PARVB-201ENST00000338758 ZNF521Q96K83 1311 aa16.27■□□□□ 0.19
PARVB-201ENST00000338758 INTS4Q96HW7 963 aaKnown RBP16.27■□□□□ 0.19
PARVB-201ENST00000338758 TMEM87BQ96K49 555 aa16.27■□□□□ 0.19
PARVB-201ENST00000338758 PUS3Q9BZE2 481 aaKnown RBP16.27■□□□□ 0.19
PARVB-201ENST00000338758 NCOA5Q9HCD5 579 aaKnown RBP16.27■□□□□ 0.19
PARVB-201ENST00000338758 SYT1P21579 422 aa16.26■□□□□ 0.19
PARVB-201ENST00000338758 CCDC40Q4G0X9 1142 aa16.26■□□□□ 0.19
PARVB-201ENST00000338758 CCDC112Q8NEF3 446 aa16.26■□□□□ 0.19
PARVB-201ENST00000338758 TBC1D22AQ8WUA7 517 aa16.26■□□□□ 0.19
PARVB-201ENST00000338758 PARP1P09874 1014 aaKnown RBP16.26■□□□□ 0.19
PARVB-201ENST00000338758 GNA11P29992 359 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms