RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 ARAP2Q8WZ64 1704 aa14.68□□□□□ -0.06
CSMD2-202ENST00000338325 ANKRD18BA2A2Z9 1011 aa14.67□□□□□ -0.06
CSMD2-202ENST00000338325 ZBTB48P10074 688 aaPredicted RBP14.67□□□□□ -0.06
CSMD2-202ENST00000338325 C15orf52Q6ZUT6 534 aaKnown RBP14.67□□□□□ -0.06
CSMD2-202ENST00000338325 IFNL1Q8IU54 200 aa14.67□□□□□ -0.06
CSMD2-202ENST00000338325 LINS1Q8NG48 757 aa14.67□□□□□ -0.06
CSMD2-202ENST00000338325 DNAAF4Q8WXU2 420 aa14.67□□□□□ -0.06
CSMD2-202ENST00000338325 WNK4Q96J92 1243 aa14.67□□□□□ -0.06
CSMD2-202ENST00000338325 PPP1R12BO60237 982 aaPredicted RBP14.66□□□□□ -0.06
CSMD2-202ENST00000338325 FKBP5Q13451 457 aaPredicted RBP14.66□□□□□ -0.06
CSMD2-202ENST00000338325 ZNF804AQ7Z570 1209 aa14.66□□□□□ -0.06
CSMD2-202ENST00000338325 WWC1Q8IX03 1113 aa14.66□□□□□ -0.06
CSMD2-202ENST00000338325 CLMNQ96JQ2 1002 aa14.66□□□□□ -0.06
CSMD2-202ENST00000338325 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.66□□□□□ -0.06
CSMD2-202ENST00000338325 IL16Q14005 1332 aa14.66□□□□□ -0.06
CSMD2-202ENST00000338325 UNCXA6NJT0 531 aa14.66□□□□□ -0.06
CSMD2-202ENST00000338325 SNAP23O00161 211 aa14.66□□□□□ -0.06
CSMD2-202ENST00000338325 MYO1BO43795 1136 aa14.66□□□□□ -0.06
CSMD2-202ENST00000338325 TAF5LO75529 589 aa14.66□□□□□ -0.06
CSMD2-202ENST00000338325 CFAP100Q494V2 611 aa14.66□□□□□ -0.06
CSMD2-202ENST00000338325 TRIM17Q9Y577 477 aa14.66□□□□□ -0.06
CSMD2-202ENST00000338325 PCDHAC2Q9Y5I4 1007 aa14.66□□□□□ -0.06
CSMD2-202ENST00000338325 HTTP42858 3142 aa14.65□□□□□ -0.06
CSMD2-202ENST00000338325 CLRN2A0PK11 232 aa14.65□□□□□ -0.06
CSMD2-202ENST00000338325 SPDYE2BA6NHP3 402 aa14.65□□□□□ -0.06
CSMD2-202ENST00000338325 F8W031 263 aaPredicted RBP14.65□□□□□ -0.06
CSMD2-202ENST00000338325 IGF2BP3O00425 579 aaKnown RBP eCLIP14.65□□□□□ -0.06
CSMD2-202ENST00000338325 SPDYE6P0CI01 402 aa14.65□□□□□ -0.06
CSMD2-202ENST00000338325 IL1R1P14778 569 aa14.65□□□□□ -0.06
CSMD2-202ENST00000338325 FKBP1AP62942 108 aaKnown RBP14.65□□□□□ -0.06
CSMD2-202ENST00000338325 IFIT5Q13325 482 aaKnown RBP14.65□□□□□ -0.06
CSMD2-202ENST00000338325 SUPT20HL1Q3ZLR7 823 aa14.65□□□□□ -0.06
CSMD2-202ENST00000338325 OTOP1Q7RTM1 612 aa14.65□□□□□ -0.06
CSMD2-202ENST00000338325 HELBQ8NG08 1087 aaPredicted RBP14.65□□□□□ -0.06
CSMD2-202ENST00000338325 VEZTQ9HBM0 779 aa14.64□□□□□ -0.07
CSMD2-202ENST00000338325 CHMP3Q9Y3E7 222 aa14.64□□□□□ -0.07
CSMD2-202ENST00000338325 IREB2P48200 963 aaKnown RBP14.63□□□□□ -0.07
CSMD2-202ENST00000338325 FOXO4P98177 505 aa14.63□□□□□ -0.07
CSMD2-202ENST00000338325 INTS3Q68E01 1043 aaKnown RBP14.63□□□□□ -0.07
CSMD2-202ENST00000338325 GCC1Q96CN9 775 aa14.63□□□□□ -0.07
CSMD2-202ENST00000338325 ERO1AQ96HE7 468 aa14.63□□□□□ -0.07
CSMD2-202ENST00000338325 PRMT6Q96LA8 375 aaPredicted RBP14.63□□□□□ -0.07
CSMD2-202ENST00000338325 FANCIQ9NVI1 1328 aa14.63□□□□□ -0.07
CSMD2-202ENST00000338325 NBPF12Q5TAG4 269 aaPredicted RBP14.62□□□□□ -0.07
CSMD2-202ENST00000338325 OTUD7BQ6GQQ9 843 aa14.62□□□□□ -0.07
CSMD2-202ENST00000338325 AOX1Q06278 1338 aa14.62□□□□□ -0.07
CSMD2-202ENST00000338325 USP2O75604 605 aaPredicted RBP14.61□□□□□ -0.07
CSMD2-202ENST00000338325 GJA5P36382 358 aa14.61□□□□□ -0.07
CSMD2-202ENST00000338325 RBM5P52756 815 aaKnown RBP eCLIP14.61□□□□□ -0.07
CSMD2-202ENST00000338325 CRHR2Q13324 411 aa14.61□□□□□ -0.07
CSMD2-202ENST00000338325 ANKRD13AQ8IZ07 590 aa14.61□□□□□ -0.07
CSMD2-202ENST00000338325 JAG2Q9Y219 1238 aa14.61□□□□□ -0.07
CSMD2-202ENST00000338325 POTEFA5A3E0 1075 aa14.61□□□□□ -0.07
CSMD2-202ENST00000338325 RASA3Q14644 834 aa14.61□□□□□ -0.07
CSMD2-202ENST00000338325 CCDC184Q52MB2 194 aa14.61□□□□□ -0.07
CSMD2-202ENST00000338325 NCBP3Q53F19 620 aaKnown RBP14.61□□□□□ -0.07
CSMD2-202ENST00000338325 CD99L2Q8TCZ2 262 aa14.61□□□□□ -0.07
CSMD2-202ENST00000338325 PTPN22Q9Y2R2 807 aa14.61□□□□□ -0.07
CSMD2-202ENST00000338325 TESPA1A2RU30 521 aaPredicted RBP14.6□□□□□ -0.07
CSMD2-202ENST00000338325 TNFAIP1Q13829 316 aa14.6□□□□□ -0.07
CSMD2-202ENST00000338325 TAF7LQ5H9L4 462 aa14.6□□□□□ -0.07
CSMD2-202ENST00000338325 BEND3Q5T5X7 828 aa14.6□□□□□ -0.07
CSMD2-202ENST00000338325 LMBR1LQ6UX01 489 aa14.6□□□□□ -0.07
CSMD2-202ENST00000338325 LDHAL6AQ6ZMR3 332 aa14.6□□□□□ -0.07
CSMD2-202ENST00000338325 FAM205AQ6ZU69 1335 aa14.59□□□□□ -0.07
CSMD2-202ENST00000338325 F6X3S4 739 aa14.59□□□□□ -0.07
CSMD2-202ENST00000338325 PLIN1O60240 522 aa14.59□□□□□ -0.07
CSMD2-202ENST00000338325 VAMP4O75379 141 aa14.59□□□□□ -0.07
CSMD2-202ENST00000338325 CCDC57Q2TAC2 916 aa14.59□□□□□ -0.07
CSMD2-202ENST00000338325 SPDYE2Q495Y8 402 aa14.59□□□□□ -0.07
CSMD2-202ENST00000338325 ZNF594Q96JF6 807 aaPredicted RBP14.59□□□□□ -0.07
CSMD2-202ENST00000338325 ELP3Q9H9T3 547 aa14.59□□□□□ -0.07
CSMD2-202ENST00000338325 EFCC1Q9HA90 598 aa14.59□□□□□ -0.07
CSMD2-202ENST00000338325 CNNM1Q9NRU3 951 aa14.59□□□□□ -0.07
CSMD2-202ENST00000338325 CENPFP49454 3210 aa14.58□□□□□ -0.07
CSMD2-202ENST00000338325 GRM8O00222 908 aa14.58□□□□□ -0.08
CSMD2-202ENST00000338325 SP3Q02447 781 aa14.58□□□□□ -0.08
CSMD2-202ENST00000338325 EPHA10Q5JZY3 1008 aa14.58□□□□□ -0.08
CSMD2-202ENST00000338325 MFSD14BQ5SR56 506 aa14.58□□□□□ -0.08
CSMD2-202ENST00000338325 ARMC5Q96C12 935 aa14.58□□□□□ -0.08
CSMD2-202ENST00000338325 OPTNQ96CV9 577 aa14.58□□□□□ -0.08
CSMD2-202ENST00000338325 PTPN18Q99952 460 aa14.58□□□□□ -0.08
CSMD2-202ENST00000338325 ZNF70Q9UC06 446 aaPredicted RBP14.58□□□□□ -0.08
CSMD2-202ENST00000338325 SERPINA10Q9UK55 444 aa14.58□□□□□ -0.08
CSMD2-202ENST00000338325 MKI67P46013 3256 aaKnown RBP14.58□□□□□ -0.08
CSMD2-202ENST00000338325 EXOSC9Q06265 439 aaKnown RBP14.57□□□□□ -0.08
CSMD2-202ENST00000338325 TDRD7Q8NHU6 1098 aaKnown RBP14.57□□□□□ -0.08
CSMD2-202ENST00000338325 TTF2Q9UNY4 1162 aaKnown RBP14.57□□□□□ -0.08
CSMD2-202ENST00000338325 KIAA0100Q14667 2235 aaKnown RBP14.56□□□□□ -0.08
CSMD2-202ENST00000338325 UBE4AQ14139 1066 aa14.56□□□□□ -0.08
CSMD2-202ENST00000338325 MS4A4AQ96JQ5 239 aa14.56□□□□□ -0.08
CSMD2-202ENST00000338325 TDRD3Q9H7E2 651 aaKnown RBP14.56□□□□□ -0.08
CSMD2-202ENST00000338325 HIBADHP31937 336 aaKnown RBP14.56□□□□□ -0.08
CSMD2-202ENST00000338325 GYG1P46976 350 aa14.56□□□□□ -0.08
CSMD2-202ENST00000338325 WDR63Q8IWG1 891 aa14.56□□□□□ -0.08
CSMD2-202ENST00000338325 DZIP1LQ8IYY4 767 aaKnown RBP14.56□□□□□ -0.08
CSMD2-202ENST00000338325 TEPSINQ96N21 525 aa14.56□□□□□ -0.08
CSMD2-202ENST00000338325 C9orf78Q9NZ63 289 aaPredicted RBP14.56□□□□□ -0.08
CSMD2-202ENST00000338325 TNNI2P48788 182 aa14.55□□□□□ -0.08
CSMD2-202ENST00000338325 CAP1Q01518 475 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms