RNA–Protein interactions for RNA: ENST00000336708.11

TRIM16-201, Transcript of tripartite motif containing 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM16, Length 2,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-201ENST00000336708 BRF1Q92994 677 aa11.53□□□□□ -0.56
TRIM16-201ENST00000336708 CCDC85AQ96PX6 553 aaPredicted RBP11.53□□□□□ -0.56
TRIM16-201ENST00000336708 FUCA2Q9BTY2 467 aa11.53□□□□□ -0.56
TRIM16-201ENST00000336708 CTNNA3Q9UI47 895 aa11.53□□□□□ -0.56
TRIM16-201ENST00000336708 MROH5Q6ZUA9 1318 aa11.52□□□□□ -0.56
TRIM16-201ENST00000336708 WDR19Q8NEZ3 1342 aa11.52□□□□□ -0.56
TRIM16-201ENST00000336708 ZBTB22O15209 634 aa11.52□□□□□ -0.57
TRIM16-201ENST00000336708 DTNBO60941 627 aa11.52□□□□□ -0.57
TRIM16-201ENST00000336708 PTMAP06454 111 aaKnown RBP11.52□□□□□ -0.57
TRIM16-201ENST00000336708 RESTQ13127 1097 aa11.52□□□□□ -0.57
TRIM16-201ENST00000336708 STK3Q13188 491 aa11.52□□□□□ -0.57
TRIM16-201ENST00000336708 UVSSAQ2YD98 709 aa11.52□□□□□ -0.57
TRIM16-201ENST00000336708 JAK2O60674 1132 aa11.52□□□□□ -0.57
TRIM16-201ENST00000336708 CAMTA2O94983 1202 aa11.52□□□□□ -0.57
TRIM16-201ENST00000336708 CTDNEP1O95476 244 aa11.52□□□□□ -0.57
TRIM16-201ENST00000336708 ADD2P35612 726 aa11.52□□□□□ -0.57
TRIM16-201ENST00000336708 TTF1Q15361 905 aaPredicted RBP11.52□□□□□ -0.57
TRIM16-201ENST00000336708 PPP4R3BQ5MIZ7 849 aa11.52□□□□□ -0.57
TRIM16-201ENST00000336708 TTC6Q86TZ1 520 aa11.52□□□□□ -0.57
TRIM16-201ENST00000336708 FAM184AQ8NB25 1140 aa11.52□□□□□ -0.57
TRIM16-201ENST00000336708 NSUN7Q8NE18 718 aaKnown RBP11.52□□□□□ -0.57
TRIM16-201ENST00000336708 TBC1D2BQ9UPU7 963 aa11.52□□□□□ -0.57
TRIM16-201ENST00000336708 CRKLP46109 303 aaKnown RBP11.51□□□□□ -0.57
TRIM16-201ENST00000336708 ZSCAN25Q6NSZ9 544 aa11.51□□□□□ -0.57
TRIM16-201ENST00000336708 RNF214Q8ND24 703 aa11.51□□□□□ -0.57
TRIM16-201ENST00000336708 SYTL4Q96C24 671 aaPredicted RBP11.51□□□□□ -0.57
TRIM16-201ENST00000336708 PUS7LQ9H0K6 701 aaKnown RBP11.51□□□□□ -0.57
TRIM16-201ENST00000336708 SCN7AQ01118 1682 aa11.51□□□□□ -0.57
TRIM16-201ENST00000336708 TIAM2Q8IVF5 1701 aa11.51□□□□□ -0.57
TRIM16-201ENST00000336708 PARP10Q53GL7 1025 aa11.51□□□□□ -0.57
TRIM16-201ENST00000336708 SUSD4Q5VX71 490 aa11.51□□□□□ -0.57
TRIM16-201ENST00000336708 NAA16Q6N069 864 aaPredicted RBP11.51□□□□□ -0.57
TRIM16-201ENST00000336708 SCAND2PQ9GZW5 306 aaPredicted RBP11.51□□□□□ -0.57
TRIM16-201ENST00000336708 ZSCAN16Q9H4T2 348 aaPredicted RBP11.51□□□□□ -0.57
TRIM16-201ENST00000336708 CNNM1Q9NRU3 951 aa11.51□□□□□ -0.57
TRIM16-201ENST00000336708 KAT6BQ8WYB5 2073 aa11.5□□□□□ -0.57
TRIM16-201ENST00000336708 HMGN5P82970 282 aaKnown RBP11.5□□□□□ -0.57
TRIM16-201ENST00000336708 UBE3CQ15386 1083 aa11.5□□□□□ -0.57
TRIM16-201ENST00000336708 MB21D2Q8IYB1 491 aaPredicted RBP11.5□□□□□ -0.57
TRIM16-201ENST00000336708 CHMP4CQ96CF2 233 aa11.5□□□□□ -0.57
TRIM16-201ENST00000336708 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.5□□□□□ -0.57
TRIM16-201ENST00000336708 BCL9LQ86UU0 1499 aa11.5□□□□□ -0.57
TRIM16-201ENST00000336708 LOC102724428A0A0B4J2F2 783 aa11.5□□□□□ -0.57
TRIM16-201ENST00000336708 TCRBV5S4A2TA0A5A2 114 aa11.5□□□□□ -0.57
TRIM16-201ENST00000336708 FGAP02671 866 aa11.5□□□□□ -0.57
TRIM16-201ENST00000336708 UQCRFS1P1P0C7P4 283 aa11.5□□□□□ -0.57
TRIM16-201ENST00000336708 HSP90B1P14625 803 aaKnown RBP11.5□□□□□ -0.57
TRIM16-201ENST00000336708 PDIA3P30101 505 aaKnown RBP11.5□□□□□ -0.57
TRIM16-201ENST00000336708 SIK1P57059 783 aa11.5□□□□□ -0.57
TRIM16-201ENST00000336708 DMTNQ08495 405 aa11.5□□□□□ -0.57
TRIM16-201ENST00000336708 APOBRQ0VD83 1088 aa11.5□□□□□ -0.57
TRIM16-201ENST00000336708 ITPK1Q13572 414 aa11.5□□□□□ -0.57
TRIM16-201ENST00000336708 PUM3Q15397 648 aaKnown RBP11.5□□□□□ -0.57
TRIM16-201ENST00000336708 TTLL5Q6EMB2 1281 aa11.5□□□□□ -0.57
TRIM16-201ENST00000336708 PI16Q6UXB8 463 aa11.5□□□□□ -0.57
TRIM16-201ENST00000336708 LPIN2Q92539 896 aa11.5□□□□□ -0.57
TRIM16-201ENST00000336708 LRRC2Q9BYS8 371 aa11.5□□□□□ -0.57
TRIM16-201ENST00000336708 CHD4Q14839 1912 aa11.5□□□□□ -0.57
TRIM16-201ENST00000336708 IMMTQ16891 758 aaKnown RBP11.49□□□□□ -0.57
TRIM16-201ENST00000336708 CCDC102BQ68D86 513 aa11.49□□□□□ -0.57
TRIM16-201ENST00000336708 ZMYM6O95789 1325 aa11.49□□□□□ -0.57
TRIM16-201ENST00000336708 GPAA1O43292 621 aa11.49□□□□□ -0.57
TRIM16-201ENST00000336708 NTSR2O95665 410 aa11.49□□□□□ -0.57
TRIM16-201ENST00000336708 ZSCAN20P17040 1043 aaPredicted RBP11.49□□□□□ -0.57
TRIM16-201ENST00000336708 ATP6V1AP38606 617 aa11.49□□□□□ -0.57
TRIM16-201ENST00000336708 RGS22Q8NE09 1264 aa11.49□□□□□ -0.57
TRIM16-201ENST00000336708 UTP14AQ9BVJ6 771 aaKnown RBP11.49□□□□□ -0.57
TRIM16-201ENST00000336708 PIH1D3Q9NQM4 214 aaKnown RBP11.49□□□□□ -0.57
TRIM16-201ENST00000336708 RGL2O15211 777 aa11.49□□□□□ -0.57
TRIM16-201ENST00000336708 WASHC4Q2M389 1173 aa11.49□□□□□ -0.57
TRIM16-201ENST00000336708 LEO1Q8WVC0 666 aaPredicted RBP11.49□□□□□ -0.57
TRIM16-201ENST00000336708 COL4A1P02462 1669 aa11.48□□□□□ -0.57
TRIM16-201ENST00000336708 COL24A1Q17RW2 1714 aa11.48□□□□□ -0.57
TRIM16-201ENST00000336708 ADD1P35611 737 aaKnown RBP11.48□□□□□ -0.57
TRIM16-201ENST00000336708 FERMT3Q86UX7 667 aa11.48□□□□□ -0.57
TRIM16-201ENST00000336708 CCDC94Q9BW85 323 aaPredicted RBP11.48□□□□□ -0.57
TRIM16-201ENST00000336708 PTPDC1A2A3K4 754 aa11.48□□□□□ -0.57
TRIM16-201ENST00000336708 DYNC1I1O14576 645 aa11.48□□□□□ -0.57
TRIM16-201ENST00000336708 PHKA1P46020 1223 aa11.48□□□□□ -0.57
TRIM16-201ENST00000336708 RBM43Q6ZSC3 357 aaKnown RBP11.48□□□□□ -0.57
TRIM16-201ENST00000336708 SMARCC1Q92922 1105 aaPredicted RBP11.48□□□□□ -0.57
TRIM16-201ENST00000336708 NBPF3Q9H094 633 aa11.48□□□□□ -0.57
TRIM16-201ENST00000336708 CGNQ9P2M7 1197 aaKnown RBP11.48□□□□□ -0.57
TRIM16-201ENST00000336708 ADAMTS2O95450 1211 aa11.47□□□□□ -0.57
TRIM16-201ENST00000336708 ANTXR2P58335 489 aa11.47□□□□□ -0.57
TRIM16-201ENST00000336708 ALX1Q15699 326 aa11.47□□□□□ -0.57
TRIM16-201ENST00000336708 ATL3Q6DD88 541 aa11.47□□□□□ -0.57
TRIM16-201ENST00000336708 FAM173BQ6P4H8 233 aa11.47□□□□□ -0.57
TRIM16-201ENST00000336708 NOL7Q9UMY1 257 aaKnown RBP11.47□□□□□ -0.57
TRIM16-201ENST00000336708 KIF3AQ9Y496 699 aa11.47□□□□□ -0.57
TRIM16-201ENST00000336708 ECM29Q5VYK3 1845 aa11.47□□□□□ -0.57
TRIM16-201ENST00000336708 SPATA32Q96LK8 384 aa11.47□□□□□ -0.57
TRIM16-201ENST00000336708 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.47□□□□□ -0.57
TRIM16-201ENST00000336708 MCM5P33992 734 aa11.46□□□□□ -0.57
TRIM16-201ENST00000336708 NCOA7Q8NI08 942 aa11.46□□□□□ -0.57
TRIM16-201ENST00000336708 ACSBG1Q96GR2 724 aa11.46□□□□□ -0.57
TRIM16-201ENST00000336708 ZNF830Q96NB3 372 aaPredicted RBP11.46□□□□□ -0.57
TRIM16-201ENST00000336708 SLC5A1P13866 664 aa11.46□□□□□ -0.57
TRIM16-201ENST00000336708 PDE6AP16499 860 aa11.46□□□□□ -0.57
TRIM16-201ENST00000336708 SLC9C2Q5TAH2 1124 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms