RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 BMP15O95972 392 aa11.05□□□□□ -0.64
COL4A6-201ENST00000334504 THEMISQ8N1K5 641 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-201ENST00000334504 MRRFQ96E11 262 aaKnown RBP11.05□□□□□ -0.64
COL4A6-201ENST00000334504 BCL2L12Q9HB09 334 aa11.05□□□□□ -0.64
COL4A6-201ENST00000334504 TPX2Q9ULW0 747 aaKnown RBP11.05□□□□□ -0.64
COL4A6-201ENST00000334504 RBM8AQ9Y5S9 174 aaKnown RBP11.05□□□□□ -0.64
COL4A6-201ENST00000334504 HDAC1Q13547 482 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-201ENST00000334504 ATP6V0A2Q9Y487 856 aa11.05□□□□□ -0.64
COL4A6-201ENST00000334504 GMNNO75496 209 aa11.05□□□□□ -0.64
COL4A6-201ENST00000334504 ERCC5P28715 1186 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-201ENST00000334504 ZNF365Q70YC5 407 aa11.05□□□□□ -0.64
COL4A6-201ENST00000334504 PHLDB2Q86SQ0 1253 aa11.05□□□□□ -0.64
COL4A6-201ENST00000334504 EPSTI1Q96J88 318 aa11.05□□□□□ -0.64
COL4A6-201ENST00000334504 NUF2Q9BZD4 464 aa11.05□□□□□ -0.64
COL4A6-201ENST00000334504 SNRKQ9NRH2 765 aa11.05□□□□□ -0.64
COL4A6-201ENST00000334504 RIPOR2Q9Y4F9 1068 aa11.05□□□□□ -0.64
COL4A6-201ENST00000334504 HSPA1LP34931 641 aa11.04□□□□□ -0.64
COL4A6-201ENST00000334504 PSMD6Q15008 389 aa11.04□□□□□ -0.64
COL4A6-201ENST00000334504 SEL1L2Q5TEA6 688 aa11.04□□□□□ -0.64
COL4A6-201ENST00000334504 VPS52Q8N1B4 723 aa11.04□□□□□ -0.64
COL4A6-201ENST00000334504 DDX21Q9NR30 783 aaKnown RBP eCLIP11.04□□□□□ -0.64
COL4A6-201ENST00000334504 TXNDC16Q9P2K2 825 aa11.04□□□□□ -0.64
COL4A6-201ENST00000334504 RTEL1-TNFRSF6BF6WH68 1400 aa11.04□□□□□ -0.64
COL4A6-201ENST00000334504 RNASE9P60153 205 aaKnown RBP11.04□□□□□ -0.64
COL4A6-201ENST00000334504 IFIT5Q13325 482 aaKnown RBP11.04□□□□□ -0.64
COL4A6-201ENST00000334504 TUBB2AQ13885 445 aa11.04□□□□□ -0.64
COL4A6-201ENST00000334504 JAKMIP2Q96AA8 810 aa11.04□□□□□ -0.64
COL4A6-201ENST00000334504 TUBB2BQ9BVA1 445 aa11.04□□□□□ -0.64
COL4A6-201ENST00000334504 SAMM50Q9Y512 469 aa11.04□□□□□ -0.64
COL4A6-201ENST00000334504 SLC4A8Q2Y0W8 1093 aa11.04□□□□□ -0.64
COL4A6-201ENST00000334504 MTUS1Q9ULD2 1270 aa11.04□□□□□ -0.64
COL4A6-201ENST00000334504 ZBTB43O43298 467 aa11.04□□□□□ -0.64
COL4A6-201ENST00000334504 MAP7Q14244 749 aa11.04□□□□□ -0.64
COL4A6-201ENST00000334504 MCM7P33993 719 aa11.04□□□□□ -0.64
COL4A6-201ENST00000334504 CCDC62Q6P9F0 684 aa11.04□□□□□ -0.64
COL4A6-201ENST00000334504 IFT20Q8IY31 132 aa11.04□□□□□ -0.64
COL4A6-201ENST00000334504 BICDL2A1A5D9 508 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 TSPY2A6NKD2 308 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 NBPF7P0C2Y1 421 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-201ENST00000334504 WTAPQ15007 396 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 MUM1Q2TAK8 710 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 ZNF354CQ86Y25 554 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 TSC1Q92574 1164 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 TSPYL2Q9H2G4 693 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-201ENST00000334504 CCT6AP40227 531 aaKnown RBP11.03□□□□□ -0.64
COL4A6-201ENST00000334504 FGD5Q6ZNL6 1462 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 DMTNQ08495 405 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 TMOD2Q9NZR1 351 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 ODF2LQ9ULJ1 636 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 FAM169AQ9Y6X4 670 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 PPP1R42Q7Z4L9 355 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 GSDMBQ8TAX9 411 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 KIAA1524Q8TCG1 905 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 NGLY1Q96IV0 654 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-201ENST00000334504 UTP11Q9Y3A2 253 aaKnown RBP11.03□□□□□ -0.64
COL4A6-201ENST00000334504 ZNF75DP51815 510 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 SDCCAG8Q86SQ7 713 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-201ENST00000334504 AFAP1Q8N556 730 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 ANKRD24Q8TF21 1146 aa11.03□□□□□ -0.64
COL4A6-201ENST00000334504 AK2P54819 239 aa11.02□□□□□ -0.64
COL4A6-201ENST00000334504 MYL5Q02045 173 aa11.02□□□□□ -0.64
COL4A6-201ENST00000334504 WHAMMQ8TF30 809 aa11.02□□□□□ -0.64
COL4A6-201ENST00000334504 TTF2Q9UNY4 1162 aaKnown RBP11.02□□□□□ -0.64
COL4A6-201ENST00000334504 CTNND2Q9UQB3 1225 aa11.02□□□□□ -0.64
COL4A6-201ENST00000334504 PCDHB15Q9Y5E8 787 aa11.02□□□□□ -0.64
COL4A6-201ENST00000334504 RTN1Q16799 776 aa11.02□□□□□ -0.65
COL4A6-201ENST00000334504 ERCC6LQ2NKX8 1250 aa11.02□□□□□ -0.65
COL4A6-201ENST00000334504 ERMNQ8TAM6 284 aa11.02□□□□□ -0.65
COL4A6-201ENST00000334504 TRIM4Q9C037 500 aa11.02□□□□□ -0.65
COL4A6-201ENST00000334504 CETN3O15182 167 aa11.02□□□□□ -0.65
COL4A6-201ENST00000334504 ARHGAP24Q8N264 748 aa11.02□□□□□ -0.65
COL4A6-201ENST00000334504 GPR161Q8N6U8 529 aaKnown RBP11.02□□□□□ -0.65
COL4A6-201ENST00000334504 IGSF22Q8N9C0 903 aa11.02□□□□□ -0.65
COL4A6-201ENST00000334504 CLUL1Q15846 466 aa11.02□□□□□ -0.65
COL4A6-201ENST00000334504 LIG3P49916 1009 aa11.02□□□□□ -0.65
COL4A6-201ENST00000334504 SH2D4BQ5SQS7 431 aa11.02□□□□□ -0.65
COL4A6-201ENST00000334504 CYP26C1Q6V0L0 522 aa11.02□□□□□ -0.65
COL4A6-201ENST00000334504 PRDM11Q9NQV5 511 aa11.02□□□□□ -0.65
COL4A6-201ENST00000334504 RUFY4Q6ZNE9 571 aa11.01□□□□□ -0.65
COL4A6-201ENST00000334504 TAOK1Q7L7X3 1001 aa11.01□□□□□ -0.65
COL4A6-201ENST00000334504 PDE1AP54750 535 aa11.01□□□□□ -0.65
COL4A6-201ENST00000334504 PPANQ9NQ55 473 aaKnown RBP11.01□□□□□ -0.65
COL4A6-201ENST00000334504 GNGT1P63211 74 aa11.01□□□□□ -0.65
COL4A6-201ENST00000334504 PDE4BQ07343 736 aa11.01□□□□□ -0.65
COL4A6-201ENST00000334504 LONRF3Q496Y0 759 aa11.01□□□□□ -0.65
COL4A6-201ENST00000334504 ANKLE2Q86XL3 938 aa11.01□□□□□ -0.65
COL4A6-201ENST00000334504 MAP3K2Q9Y2U5 619 aa11.01□□□□□ -0.65
COL4A6-201ENST00000334504 ZPR1O75312 459 aa11.01□□□□□ -0.65
COL4A6-201ENST00000334504 PPFIA1Q13136 1202 aa11.01□□□□□ -0.65
COL4A6-201ENST00000334504 SND1Q7KZF4 910 aaKnown RBP eCLIP11.01□□□□□ -0.65
COL4A6-201ENST00000334504 TRIM31Q9BZY9 425 aa11.01□□□□□ -0.65
COL4A6-201ENST00000334504 HEATR3Q7Z4Q2 680 aa11.01□□□□□ -0.65
COL4A6-201ENST00000334504 ANKIB1Q9P2G1 1089 aa11.01□□□□□ -0.65
COL4A6-201ENST00000334504 CFTRP13569 1480 aa11□□□□□ -0.65
COL4A6-201ENST00000334504 OPHN1O60890 802 aa11□□□□□ -0.65
COL4A6-201ENST00000334504 FAM13AO94988 1023 aa11□□□□□ -0.65
COL4A6-201ENST00000334504 COG7P83436 770 aa11□□□□□ -0.65
COL4A6-201ENST00000334504 RAPGEF1Q13905 1077 aa11□□□□□ -0.65
COL4A6-201ENST00000334504 USP37Q86T82 979 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms