RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 RECQLP46063 649 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 CHMP4BP1P59074 171 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 CTTNQ14247 550 aaKnown RBP6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 PDXDC1Q6P996 788 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 FRAT1Q92837 279 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 TRAK2O60296 914 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 TUBA3EQ6PEY2 450 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 KRT77Q7Z794 578 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 N4BP2L2Q92802 583 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 HYPKQ9NX55 129 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 DCDC2Q9UHG0 476 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 CAPN11Q9UMQ6 739 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 ATP5DP30049 168 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 CEP78Q5JTW2 689 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 TLK2Q86UE8 772 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 DDX28Q9NUL7 540 aaKnown RBP6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 RANBP6O60518 1105 aaKnown RBP6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 KIF22Q14807 665 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 WTAPQ15007 396 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 ICE2Q659A1 982 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 PCMTD1Q96MG8 357 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 NUP62P37198 522 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 KRT71Q3SY84 523 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 ZNF397Q8NF99 534 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 EPS8L1Q8TE68 723 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 XAB2Q9HCS7 855 aaKnown RBP6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 GOLGA6AQ9NYA3 693 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 EVI5O60447 810 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 KRT15P19012 456 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 CTNNA2P26232 953 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 PMS1P54277 932 aaKnown RBP6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 FKBP15Q5T1M5 1219 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 THEMISQ8N1K5 641 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 GCC1Q96CN9 775 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 PPCSQ9HAB8 311 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 APOL1O14791 398 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 KINO60870 393 aaKnown RBP6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 S100BP04271 92 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 NDUFA5Q16718 116 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 CCHCR1Q8TD31 782 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 BAG1Q99933 345 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 KDM2AQ9Y2K7 1162 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 SLC4A7Q9Y6M7 1214 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 PLEKHH2Q8IVE3 1493 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 ARHGAP35Q9NRY4 1499 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 CYTH3O43739 400 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 MAP3K20Q9NYL2 800 aaKnown RBP6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 RSPH14Q9UHP6 348 aa6.83□□□□□ -1.32
CDC42BPA-201ENST00000334218 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 HAND2P61296 217 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 SPA17Q15506 151 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 ANGPTL8Q6UXH0 198 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 RAB11FIP4Q86YS3 637 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 MGARPQ8TDB4 240 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 MRPS25P82663 173 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 SAMD1Q6SPF0 538 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 TTC12Q9H892 705 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 LZTFL1Q9NQ48 299 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 HARSP12081 509 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 NONOQ15233 471 aaKnown RBP eCLIP6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 ATAD3BQ5T9A4 648 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 NUTM2FA1L443 756 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 SFI1A8K8P3 1242 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 NUTM2GQ5VZR2 741 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 PPP4R3AQ6IN85 833 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 CCDC155Q8N6L0 562 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 PHAXQ9H814 394 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 PPFIA4O75335 1185 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 SAMD15Q9P1V8 674 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 ATPIF1Q9UII2 106 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 A8MXQ7 604 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 CPLX1O14810 134 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 TBC1D8O95759 1140 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 CFAP157Q5JU67 520 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 BZW1Q7L1Q6 419 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 CCDC43Q96MW1 224 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 RNF216Q9NWF9 866 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 SYCE1LA8MT33 242 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 KRT10P13645 584 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 HLTFQ14527 1009 aaKnown RBP eCLIP6.82□□□□□ -1.322e-6■■□□□ 13.6
CDC42BPA-201ENST00000334218 CNGA2Q16280 664 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 UACAQ9BZF9 1416 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 RNF40O75150 1001 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 MTIF2P46199 727 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 PPP1R7Q15435 360 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 SH3KBP1Q96B97 665 aa6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 MRPL11Q9Y3B7 192 aaKnown RBP6.82□□□□□ -1.32
CDC42BPA-201ENST00000334218 HNRNPMP52272 730 aaKnown RBP eCLIP6.81□□□□□ -1.325e-11■■■■■ 37.4
CDC42BPA-201ENST00000334218 PIP4K2BP78356 416 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 ILF2Q12905 390 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 RGL3Q3MIN7 710 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 IPPQ9Y573 584 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 ABCA10Q8WWZ4 1543 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 ENOX1Q8TC92 643 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 SH3GL1Q99961 368 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 VPS8Q8N3P4 1428 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 GOLGA8RI6L899 631 aa6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 SCHIP1Q9P0W5 487 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-201ENST00000334218 G3BP2Q9UN86 482 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms